RNA–Protein interactions for RNA: ENST00000483142.5

HDAC9-224, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 305 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-224ENST00000483142 XIRP1Q702N8 1843 aaKnown RBP6.6□□□□□ -1.35
HDAC9-224ENST00000483142 ABCC11Q96J66 1382 aa6.59□□□□□ -1.35
HDAC9-224ENST00000483142 SPDYE2BA6NHP3 402 aa6.59□□□□□ -1.35
HDAC9-224ENST00000483142 SPDYE6P0CI01 402 aa6.59□□□□□ -1.35
HDAC9-224ENST00000483142 HDGFP51858 240 aaKnown RBP6.59□□□□□ -1.35
HDAC9-224ENST00000483142 NBPF8Q3BBV2 869 aa6.59□□□□□ -1.35
HDAC9-224ENST00000483142 SPDYE2Q495Y8 402 aa6.59□□□□□ -1.35
HDAC9-224ENST00000483142 ANKLE2Q86XL3 938 aa6.59□□□□□ -1.35
HDAC9-224ENST00000483142 C14orf93Q9H972 538 aaKnown RBP6.59□□□□□ -1.35
HDAC9-224ENST00000483142 STAG3Q9UJ98 1225 aa6.59□□□□□ -1.35
HDAC9-224ENST00000483142 DCCP43146 1447 aa6.59□□□□□ -1.36
HDAC9-224ENST00000483142 NCOA3Q9Y6Q9 1424 aa6.59□□□□□ -1.36
HDAC9-224ENST00000483142 METP08581 1390 aa6.58□□□□□ -1.36
HDAC9-224ENST00000483142 CHGAP10645 457 aaKnown RBP6.58□□□□□ -1.36
HDAC9-224ENST00000483142 ZNF326Q5BKZ1 582 aaKnown RBP6.58□□□□□ -1.36
HDAC9-224ENST00000483142 TXNDC2Q86VQ3 553 aa6.58□□□□□ -1.36
HDAC9-224ENST00000483142 DCAF11Q8TEB1 546 aa6.58□□□□□ -1.36
HDAC9-224ENST00000483142 TBX22Q9Y458 520 aa6.58□□□□□ -1.36
HDAC9-224ENST00000483142 EID1Q9Y6B2 187 aa6.58□□□□□ -1.36
HDAC9-224ENST00000483142 TULP4Q9NRJ4 1543 aa6.58□□□□□ -1.36
HDAC9-224ENST00000483142 FMN2Q9NZ56 1722 aa6.58□□□□□ -1.36
HDAC9-224ENST00000483142 ROCK2O75116 1388 aaKnown RBP6.57□□□□□ -1.36
HDAC9-224ENST00000483142 EIF3AQ14152 1382 aaKnown RBP6.57□□□□□ -1.36
HDAC9-224ENST00000483142 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.57□□□□□ -1.36
HDAC9-224ENST00000483142 HSPA2P54652 639 aa6.57□□□□□ -1.36
HDAC9-224ENST00000483142 NEUROD1Q13562 356 aa6.57□□□□□ -1.36
HDAC9-224ENST00000483142 RGL3Q3MIN7 710 aa6.57□□□□□ -1.36
HDAC9-224ENST00000483142 ZNF692Q9BU19 519 aaPredicted RBP6.57□□□□□ -1.36
HDAC9-224ENST00000483142 MYOM1P52179 1685 aa6.57□□□□□ -1.36
HDAC9-224ENST00000483142 ADGRL3Q9HAR2 1447 aa6.57□□□□□ -1.36
HDAC9-224ENST00000483142 USP47Q96K76 1375 aa6.57□□□□□ -1.36
HDAC9-224ENST00000483142 LRRC7Q96NW7 1537 aa6.56□□□□□ -1.36
HDAC9-224ENST00000483142 SIRT1Q96EB6 747 aa6.56□□□□□ -1.36
HDAC9-224ENST00000483142 ITSN1Q15811 1721 aa6.56□□□□□ -1.36
HDAC9-224ENST00000483142 USP32Q8NFA0 1604 aa6.55□□□□□ -1.36
HDAC9-224ENST00000483142 CFAP70Q5T0N1 1121 aa6.55□□□□□ -1.36
HDAC9-224ENST00000483142 ROBO2Q9HCK4 1378 aa6.55□□□□□ -1.36
HDAC9-224ENST00000483142 ATP7BP35670 1465 aa6.54□□□□□ -1.36
HDAC9-224ENST00000483142 NCKAP5LQ9HCH0 1330 aa6.54□□□□□ -1.36
HDAC9-224ENST00000483142 NRKQ7Z2Y5 1582 aa6.53□□□□□ -1.36
HDAC9-224ENST00000483142 ANKARQ7Z5J8 1434 aa6.53□□□□□ -1.36
HDAC9-224ENST00000483142 KIF1AQ12756 1690 aa6.53□□□□□ -1.36
HDAC9-224ENST00000483142 KCNA6P17658 529 aa6.53□□□□□ -1.36
HDAC9-224ENST00000483142 USP54Q70EL1 1684 aa6.52□□□□□ -1.37
HDAC9-224ENST00000483142 NBPF1Q3BBV0 1214 aa6.52□□□□□ -1.37
HDAC9-224ENST00000483142 NUTM2DQ5VT03 806 aaPredicted RBP6.52□□□□□ -1.37
HDAC9-224ENST00000483142 PLEKHH1Q9ULM0 1364 aa6.52□□□□□ -1.37
HDAC9-224ENST00000483142 CENPJQ9HC77 1338 aaPredicted RBP6.51□□□□□ -1.37
HDAC9-224ENST00000483142 MON2Q7Z3U7 1717 aa6.51□□□□□ -1.37
HDAC9-224ENST00000483142 SLC26A8Q96RN1 970 aa6.51□□□□□ -1.37
HDAC9-224ENST00000483142 TESK2Q96S53 571 aa6.51□□□□□ -1.37
HDAC9-224ENST00000483142 CARD11Q9BXL7 1154 aa6.51□□□□□ -1.37
HDAC9-224ENST00000483142 KDM2AQ9Y2K7 1162 aa6.51□□□□□ -1.37
HDAC9-224ENST00000483142 AKAP12Q02952 1782 aa6.51□□□□□ -1.37
HDAC9-224ENST00000483142 NHSL1Q5SYE7 1610 aa6.5□□□□□ -1.37
HDAC9-224ENST00000483142 TMEM94Q12767 1356 aa6.5□□□□□ -1.37
HDAC9-224ENST00000483142 MST1RQ04912 1400 aa6.5□□□□□ -1.37
HDAC9-224ENST00000483142 ZNF335Q9H4Z2 1342 aaPredicted RBP6.5□□□□□ -1.37
HDAC9-224ENST00000483142 NINLQ9Y2I6 1382 aa6.49□□□□□ -1.37
HDAC9-224ENST00000483142 PUS7Q96PZ0 661 aaKnown RBP6.49□□□□□ -1.37
HDAC9-224ENST00000483142 AMOTL2Q9Y2J4 779 aa6.49□□□□□ -1.37
HDAC9-224ENST00000483142 AHDC1Q5TGY3 1603 aaPredicted RBP6.49□□□□□ -1.37
HDAC9-224ENST00000483142 TRPM3Q9HCF6 1732 aaPredicted RBP6.48□□□□□ -1.37
HDAC9-224ENST00000483142 ATAD2Q6PL18 1390 aa6.48□□□□□ -1.37
HDAC9-224ENST00000483142 DISP3Q9P2K9 1392 aa6.48□□□□□ -1.37
HDAC9-224ENST00000483142 EIF4G2P78344 907 aaKnown RBP eCLIP6.48□□□□□ -1.37
HDAC9-224ENST00000483142 CACNB1Q02641 598 aaPredicted RBP6.48□□□□□ -1.37
HDAC9-224ENST00000483142 TMEM132EQ6IEE7 984 aa6.48□□□□□ -1.37
HDAC9-224ENST00000483142 MED1Q15648 1581 aaPredicted RBP6.48□□□□□ -1.37
HDAC9-224ENST00000483142 CD163L1Q9NR16 1453 aa6.47□□□□□ -1.37
HDAC9-224ENST00000483142 HSPA5P11021 654 aaKnown RBP6.47□□□□□ -1.37
HDAC9-224ENST00000483142 PLCB2Q00722 1185 aa6.47□□□□□ -1.37
HDAC9-224ENST00000483142 SPOCK2Q92563 424 aa6.47□□□□□ -1.37
HDAC9-224ENST00000483142 PRAM1Q96QH2 718 aa6.47□□□□□ -1.37
HDAC9-224ENST00000483142 ANKRD26Q9UPS8 1709 aa6.47□□□□□ -1.37
HDAC9-224ENST00000483142 CRYBG1Q9Y4K1 1723 aa6.47□□□□□ -1.37
HDAC9-224ENST00000483142 C1orf167Q5SNV9 1468 aa6.47□□□□□ -1.37
HDAC9-224ENST00000483142 CCDC7Q96M83 1385 aa6.46□□□□□ -1.37
HDAC9-224ENST00000483142 TRAK1Q9UPV9 953 aa6.46□□□□□ -1.38
HDAC9-224ENST00000483142 MARF1Q9Y4F3 1742 aaKnown RBP6.46□□□□□ -1.38
HDAC9-224ENST00000483142 RGPD8O14715 1765 aaPredicted RBP6.46□□□□□ -1.38
HDAC9-224ENST00000483142 ALS2Q96Q42 1657 aa6.45□□□□□ -1.38
HDAC9-224ENST00000483142 POLR3AO14802 1390 aaPredicted RBP6.45□□□□□ -1.38
HDAC9-224ENST00000483142 MSH6P52701 1360 aa6.45□□□□□ -1.38
HDAC9-224ENST00000483142 CPSF1Q10570 1443 aaKnown RBP6.45□□□□□ -1.38
HDAC9-224ENST00000483142 ST20-MTHFSA0A0A6YYL1 179 aa6.45□□□□□ -1.38
HDAC9-224ENST00000483142 COL16A1Q07092 1604 aaPredicted RBP6.45□□□□□ -1.38
HDAC9-224ENST00000483142 KIF20BQ96Q89 1820 aa6.45□□□□□ -1.38
HDAC9-224ENST00000483142 ROBO1Q9Y6N7 1651 aa6.45□□□□□ -1.38
HDAC9-224ENST00000483142 PRR36Q9H6K5 1346 aa6.45□□□□□ -1.38
HDAC9-224ENST00000483142 ABCA3Q99758 1704 aa6.45□□□□□ -1.38
HDAC9-224ENST00000483142 SSH2Q76I76 1423 aa6.44□□□□□ -1.38
HDAC9-224ENST00000483142 COL22A1Q8NFW1 1626 aaPredicted RBP6.44□□□□□ -1.38
HDAC9-224ENST00000483142 BCANQ96GW7 911 aa6.44□□□□□ -1.38
HDAC9-224ENST00000483142 KIF7Q2M1P5 1343 aa6.44□□□□□ -1.38
HDAC9-224ENST00000483142 EVC2Q86UK5 1308 aa6.44□□□□□ -1.38
HDAC9-224ENST00000483142 BRD4O60885 1362 aaPredicted RBP6.44□□□□□ -1.38
HDAC9-224ENST00000483142 ANKRD36BQ8N2N9 1353 aa6.44□□□□□ -1.38
HDAC9-224ENST00000483142 PIK3C2AO00443 1686 aa6.43□□□□□ -1.38
HDAC9-224ENST00000483142 PXDNQ92626 1479 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms