RNA–Protein interactions for RNA: ENST00000482902.5

SSR4-209, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-209ENST00000482902 NSD3Q9BZ95 1437 aa23.31■■□□□ 1.32
SSR4-209ENST00000482902 GGT6Q6P531 493 aa23.31■■□□□ 1.32
SSR4-209ENST00000482902 C14orf93Q9H972 538 aaKnown RBP23.31■■□□□ 1.32
SSR4-209ENST00000482902 MORC1Q86VD1 984 aa23.3■■□□□ 1.32
SSR4-209ENST00000482902 SLC12A5Q9H2X9 1139 aa23.29■■□□□ 1.32
SSR4-209ENST00000482902 NPM1P06748 294 aaKnown RBP eCLIP23.28■■□□□ 1.32
SSR4-209ENST00000482902 TMEM132EQ6IEE7 984 aa23.28■■□□□ 1.32
SSR4-209ENST00000482902 TNNT2P45379 298 aaPredicted RBP23.27■■□□□ 1.32
SSR4-209ENST00000482902 POGZQ7Z3K3 1410 aa23.27■■□□□ 1.32
SSR4-209ENST00000482902 WWC1Q8IX03 1113 aa23.27■■□□□ 1.31
SSR4-209ENST00000482902 FRMPD1Q5SYB0 1578 aa23.25■■□□□ 1.31
SSR4-209ENST00000482902 CD109Q6YHK3 1445 aa23.25■■□□□ 1.31
SSR4-209ENST00000482902 ADGRB1O14514 1584 aa23.25■■□□□ 1.31
SSR4-209ENST00000482902 MLH3Q9UHC1 1453 aa23.24■■□□□ 1.31
SSR4-209ENST00000482902 RPGRIP1LQ68CZ1 1315 aa23.24■■□□□ 1.31
SSR4-209ENST00000482902 PPLO60437 1756 aa23.23■■□□□ 1.31
SSR4-209ENST00000482902 RGS3P49796 1198 aa23.23■■□□□ 1.31
SSR4-209ENST00000482902 QRICH2Q9H0J4 1663 aa23.22■■□□□ 1.31
SSR4-209ENST00000482902 VIRMAQ69YN4 1812 aaKnown RBP23.21■■□□□ 1.31
SSR4-209ENST00000482902 ZC3H13Q5T200 1668 aaKnown RBP23.21■■□□□ 1.31
SSR4-209ENST00000482902 NEUROD2Q15784 382 aa23.21■■□□□ 1.31
SSR4-209ENST00000482902 RUNDC1Q96C34 613 aa23.21■■□□□ 1.31
SSR4-209ENST00000482902 CFAP65Q6ZU64 1925 aaKnown RBP23.21■■□□□ 1.31
SSR4-209ENST00000482902 PDE3AQ14432 1141 aa23.2■■□□□ 1.3
SSR4-209ENST00000482902 CFAP74Q9C0B2 1584 aa23.19■■□□□ 1.3
SSR4-209ENST00000482902 CGNL1Q0VF96 1302 aa23.19■■□□□ 1.3
SSR4-209ENST00000482902 RRP7AQ9Y3A4 280 aaKnown RBP23.19■■□□□ 1.3
SSR4-209ENST00000482902 HECW2Q9P2P5 1572 aa23.19■■□□□ 1.3
SSR4-209ENST00000482902 ABCC3O15438 1527 aa23.19■■□□□ 1.3
SSR4-209ENST00000482902 CANXP27824 592 aaKnown RBP23.19■■□□□ 1.3
SSR4-209ENST00000482902 SHPRHQ149N8 1683 aa23.18■■□□□ 1.3
SSR4-209ENST00000482902 TCP11L2Q8N4U5 519 aa23.18■■□□□ 1.3
SSR4-209ENST00000482902 MTHFSP49914 203 aa23.17■■□□□ 1.3
SSR4-209ENST00000482902 NUTM2DQ5VT03 806 aaPredicted RBP23.17■■□□□ 1.3
SSR4-209ENST00000482902 NINLQ9Y2I6 1382 aa23.17■■□□□ 1.3
SSR4-209ENST00000482902 IGHDP01880 384 aa23.17■■□□□ 1.3
SSR4-209ENST00000482902 PANK1Q8TE04 598 aa23.16■■□□□ 1.3
SSR4-209ENST00000482902 POGKQ9P215 609 aa23.16■■□□□ 1.3
SSR4-209ENST00000482902 COG6Q9Y2V7 657 aa23.15■■□□□ 1.3
SSR4-209ENST00000482902 USP19O94966 1318 aa23.15■■□□□ 1.3
SSR4-209ENST00000482902 EVC2Q86UK5 1308 aa23.15■■□□□ 1.3
SSR4-209ENST00000482902 CFAP53Q96M91 514 aa23.14■■□□□ 1.3
SSR4-209ENST00000482902 IQSEC2Q5JU85 1478 aa23.14■■□□□ 1.3
SSR4-209ENST00000482902 CLUAP1Q96AJ1 413 aa23.13■■□□□ 1.29
SSR4-209ENST00000482902 USP32Q8NFA0 1604 aa23.13■■□□□ 1.29
SSR4-209ENST00000482902 VGFO15240 615 aaPredicted RBP23.13■■□□□ 1.29
SSR4-209ENST00000482902 PHF23Q9BUL5 403 aaPredicted RBP23.13■■□□□ 1.29
SSR4-209ENST00000482902 GLI2P10070 1586 aa23.12■■□□□ 1.29
SSR4-209ENST00000482902 PUS7Q96PZ0 661 aaKnown RBP23.12■■□□□ 1.29
SSR4-209ENST00000482902 RRAGDQ9NQL2 400 aaPredicted RBP23.12■■□□□ 1.29
SSR4-209ENST00000482902 RARSP54136 660 aaKnown RBP23.11■■□□□ 1.29
SSR4-209ENST00000482902 WDR63Q8IWG1 891 aa23.11■■□□□ 1.29
SSR4-209ENST00000482902 RAPGEF3O95398 923 aa23.11■■□□□ 1.29
SSR4-209ENST00000482902 ANKRD36BQ8N2N9 1353 aa23.1■■□□□ 1.29
SSR4-209ENST00000482902 CAMSAP1Q5T5Y3 1602 aa23.1■■□□□ 1.29
SSR4-209ENST00000482902 TULP4Q9NRJ4 1543 aa23.1■■□□□ 1.29
SSR4-209ENST00000482902 CABP2Q9NPB3 220 aa23.09■■□□□ 1.29
SSR4-209ENST00000482902 SIGLEC1Q9BZZ2 1709 aa23.08■■□□□ 1.29
SSR4-209ENST00000482902 CCDC27Q2M243 656 aa23.08■■□□□ 1.29
SSR4-209ENST00000482902 NSD2O96028 1365 aa23.08■■□□□ 1.29
SSR4-209ENST00000482902 NEXMIFQ5QGS0 1516 aa23.08■■□□□ 1.28
SSR4-209ENST00000482902 OSCARQ8IYS5 282 aa23.08■■□□□ 1.28
SSR4-209ENST00000482902 SAFB2Q14151 953 aaKnown RBP eCLIP23.07■■□□□ 1.28
SSR4-209ENST00000482902 PIK3C2BO00750 1634 aa23.06■■□□□ 1.28
SSR4-209ENST00000482902 ARHGEF28Q8N1W1 1705 aaKnown RBP23.06■■□□□ 1.28
SSR4-209ENST00000482902 U2AF1L5P0DN76 240 aaPredicted RBP23.06■■□□□ 1.28
SSR4-209ENST00000482902 U2AF1Q01081 240 aaKnown RBP eCLIP23.06■■□□□ 1.28
SSR4-209ENST00000482902 NLRP1Q9C000 1473 aa23.04■■□□□ 1.28
SSR4-209ENST00000482902 IDI1Q13907 227 aa23.04■■□□□ 1.28
SSR4-209ENST00000482902 BCL2L13Q9BXK5 485 aa23.04■■□□□ 1.28
SSR4-209ENST00000482902 MAPK8IP3Q9UPT6 1336 aa23.04■■□□□ 1.28
SSR4-209ENST00000482902 L1TD1Q5T7N2 865 aaKnown RBP23.03■■□□□ 1.28
SSR4-209ENST00000482902 NEO1Q92859 1461 aa23.03■■□□□ 1.28
SSR4-209ENST00000482902 RLBP1P12271 317 aa23.02■■□□□ 1.28
SSR4-209ENST00000482902 MYH16Q9H6N6 1097 aa23.02■■□□□ 1.28
SSR4-209ENST00000482902 TNNQ9UQP3 1299 aa23.02■■□□□ 1.28
SSR4-209ENST00000482902 STK26Q9P289 416 aa23.02■■□□□ 1.28
SSR4-209ENST00000482902 SEC24BO95487 1268 aa23.01■■□□□ 1.27
SSR4-209ENST00000482902 SENP3Q9H4L4 574 aaPredicted RBP23.01■■□□□ 1.27
SSR4-209ENST00000482902 ARHGAP31Q2M1Z3 1444 aa23.01■■□□□ 1.27
SSR4-209ENST00000482902 AAMPQ13685 434 aa23.01■■□□□ 1.27
SSR4-209ENST00000482902 NCBP3Q53F19 620 aaKnown RBP23.01■■□□□ 1.27
SSR4-209ENST00000482902 PMFBP1Q8TBY8 1022 aa23.01■■□□□ 1.27
SSR4-209ENST00000482902 DIP2CQ9Y2E4 1556 aa23.01■■□□□ 1.27
SSR4-209ENST00000482902 BECN1Q14457 450 aa23■■□□□ 1.27
SSR4-209ENST00000482902 ANTXR1Q9H6X2 564 aa23■■□□□ 1.27
SSR4-209ENST00000482902 SRPK2P78362 688 aaKnown RBP22.99■■□□□ 1.27
SSR4-209ENST00000482902 A0A1W2PP64 1363 aa22.99■■□□□ 1.27
SSR4-209ENST00000482902 PCDHB15Q9Y5E8 787 aa22.99■■□□□ 1.27
SSR4-209ENST00000482902 SLKQ9H2G2 1235 aaPredicted RBP22.98■■□□□ 1.27
SSR4-209ENST00000482902 SLC52A1Q9NWF4 448 aa22.98■■□□□ 1.27
SSR4-209ENST00000482902 ZFYVE9O95405 1425 aa22.98■■□□□ 1.27
SSR4-209ENST00000482902 ABCC11Q96J66 1382 aa22.97■■□□□ 1.27
SSR4-209ENST00000482902 GGNBP2Q9H3C7 697 aa22.96■■□□□ 1.27
SSR4-209ENST00000482902 ADGRB2O60241 1585 aa22.95■■□□□ 1.26
SSR4-209ENST00000482902 U2SURPO15042 1029 aaKnown RBP22.94■■□□□ 1.26
SSR4-209ENST00000482902 MINK1Q8N4C8 1332 aaPredicted RBP22.92■■□□□ 1.26
SSR4-209ENST00000482902 YEATS2Q9ULM3 1422 aa22.92■■□□□ 1.26
SSR4-209ENST00000482902 TSR2Q969E8 191 aaKnown RBP22.92■■□□□ 1.26
SSR4-209ENST00000482902 PLEKHF1Q96S99 279 aa22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms