RNA–Protein interactions for RNA: ENST00000482889.1

CLCC1-209, Transcript of chloride channel CLIC like 1, humanhuman

TSL 3

Gene CLCC1, Length 752 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-209ENST00000482889 MYSM1Q5VVJ2 828 aa6.77□□□□□ -1.33
CLCC1-209ENST00000482889 FNBP4Q8N3X1 1017 aaPredicted RBP6.77□□□□□ -1.33
CLCC1-209ENST00000482889 ZNF516Q92618 1163 aa6.77□□□□□ -1.33
CLCC1-209ENST00000482889 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.77□□□□□ -1.33
CLCC1-209ENST00000482889 USP46P62068 366 aa6.76□□□□□ -1.33
CLCC1-209ENST00000482889 FUT2Q10981 343 aa6.76□□□□□ -1.33
CLCC1-209ENST00000482889 GRIPAP1Q4V328 841 aa6.76□□□□□ -1.33
CLCC1-209ENST00000482889 MORN1Q5T089 497 aa6.76□□□□□ -1.33
CLCC1-209ENST00000482889 SNRKQ9NRH2 765 aa6.76□□□□□ -1.33
CLCC1-209ENST00000482889 KDM4AO75164 1064 aa6.75□□□□□ -1.33
CLCC1-209ENST00000482889 LIMD1Q9UGP4 676 aa6.75□□□□□ -1.33
CLCC1-209ENST00000482889 SCUBE3Q8IX30 993 aa6.74□□□□□ -1.33
CLCC1-209ENST00000482889 TBC1D2Q9BYX2 928 aa6.74□□□□□ -1.33
CLCC1-209ENST00000482889 SALL2Q9Y467 1007 aaPredicted RBP6.74□□□□□ -1.33
CLCC1-209ENST00000482889 PUS10Q3MIT2 529 aaKnown RBP6.73□□□□□ -1.33
CLCC1-209ENST00000482889 HOXA2O43364 376 aa6.72□□□□□ -1.33
CLCC1-209ENST00000482889 ADH1BP00325 375 aa6.72□□□□□ -1.33
CLCC1-209ENST00000482889 PROSER2Q86WR7 435 aaPredicted RBP6.72□□□□□ -1.33
CLCC1-209ENST00000482889 NKX2-3Q8TAU0 364 aa6.72□□□□□ -1.33
CLCC1-209ENST00000482889 THAP11Q96EK4 314 aa6.72□□□□□ -1.33
CLCC1-209ENST00000482889 COG6Q9Y2V7 657 aa6.72□□□□□ -1.33
CLCC1-209ENST00000482889 TLL1O43897 1013 aa6.71□□□□□ -1.34
CLCC1-209ENST00000482889 GGCXP38435 758 aa6.71□□□□□ -1.34
CLCC1-209ENST00000482889 RFC5P40937 340 aa6.71□□□□□ -1.34
CLCC1-209ENST00000482889 DIXDC1Q155Q3 683 aa6.71□□□□□ -1.34
CLCC1-209ENST00000482889 NUTM1Q86Y26 1132 aa6.71□□□□□ -1.34
CLCC1-209ENST00000482889 SLC27A5Q9Y2P5 690 aa6.71□□□□□ -1.34
CLCC1-209ENST00000482889 CLK2P49760 499 aaKnown RBP6.7□□□□□ -1.34
CLCC1-209ENST00000482889 Q3C1V9 767 aa6.7□□□□□ -1.34
CLCC1-209ENST00000482889 PPP1R18Q6NYC8 613 aa6.7□□□□□ -1.34
CLCC1-209ENST00000482889 BRICD5Q6PL45 260 aa6.7□□□□□ -1.34
CLCC1-209ENST00000482889 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.7□□□□□ -1.34
CLCC1-209ENST00000482889 ATP1B4Q9UN42 357 aaPredicted RBP6.7□□□□□ -1.34
CLCC1-209ENST00000482889 FMNL1O95466 1100 aaPredicted RBP6.69□□□□□ -1.34
CLCC1-209ENST00000482889 GJA5P36382 358 aa6.69□□□□□ -1.34
CLCC1-209ENST00000482889 SPIRE2Q8WWL2 714 aa6.69□□□□□ -1.34
CLCC1-209ENST00000482889 SPSB2Q99619 263 aa6.69□□□□□ -1.34
CLCC1-209ENST00000482889 Q6ZNB5 142 aa6.68□□□□□ -1.34
CLCC1-209ENST00000482889 SPDYE5A6NIY4 337 aa6.67□□□□□ -1.34
CLCC1-209ENST00000482889 MSS51Q4VC12 460 aa6.67□□□□□ -1.34
CLCC1-209ENST00000482889 PPP2R2DQ66LE6 453 aa6.67□□□□□ -1.34
CLCC1-209ENST00000482889 RIC3Q7Z5B4 369 aa6.67□□□□□ -1.34
CLCC1-209ENST00000482889 SLC6A16Q9GZN6 736 aa6.67□□□□□ -1.34
CLCC1-209ENST00000482889 PCDHB15Q9Y5E8 787 aa6.67□□□□□ -1.34
CLCC1-209ENST00000482889 NDUFV2P19404 249 aa6.66□□□□□ -1.34
CLCC1-209ENST00000482889 QPCTQ16769 361 aa6.66□□□□□ -1.34
CLCC1-209ENST00000482889 RNF19BQ6ZMZ0 732 aa6.66□□□□□ -1.34
CLCC1-209ENST00000482889 ANKLE1Q8NAG6 615 aa6.66□□□□□ -1.34
CLCC1-209ENST00000482889 MTMR14Q8NCE2 650 aa6.66□□□□□ -1.34
CLCC1-209ENST00000482889 HLA-CQ95604 372 aa6.66□□□□□ -1.34
CLCC1-209ENST00000482889 MOXD2PA6NHM9 499 aa6.65□□□□□ -1.34
CLCC1-209ENST00000482889 RNF223E7ERA6 249 aa6.65□□□□□ -1.34
CLCC1-209ENST00000482889 S1PR4O95977 384 aa6.65□□□□□ -1.34
CLCC1-209ENST00000482889 FDX1P10109 184 aa6.65□□□□□ -1.34
CLCC1-209ENST00000482889 CSPP1Q1MSJ5 1256 aa6.65□□□□□ -1.34
CLCC1-209ENST00000482889 RTL5Q5HYW3 569 aaPredicted RBP6.65□□□□□ -1.34
CLCC1-209ENST00000482889 FAM160A2Q8N612 972 aaPredicted RBP6.65□□□□□ -1.34
CLCC1-209ENST00000482889 GDPD2Q9HCC8 539 aa6.65□□□□□ -1.34
CLCC1-209ENST00000482889 SPTLC1O15269 473 aa6.64□□□□□ -1.35
CLCC1-209ENST00000482889 TUSC1Q2TAM9 212 aa6.64□□□□□ -1.35
CLCC1-209ENST00000482889 BANK1Q8NDB2 785 aa6.64□□□□□ -1.35
CLCC1-209ENST00000482889 USB1Q9BQ65 265 aaKnown RBP6.64□□□□□ -1.35
CLCC1-209ENST00000482889 V9GY48 417 aaPredicted RBP6.64□□□□□ -1.35
CLCC1-209ENST00000482889 POM121CA8CG34 1229 aa6.63□□□□□ -1.35
CLCC1-209ENST00000482889 PDIA4P13667 645 aaKnown RBP6.63□□□□□ -1.35
CLCC1-209ENST00000482889 GUCA2AQ02747 115 aa6.63□□□□□ -1.35
CLCC1-209ENST00000482889 RSBN1LQ6PCB5 846 aaPredicted RBP6.63□□□□□ -1.35
CLCC1-209ENST00000482889 PCDHGC3Q9UN70 934 aa6.63□□□□□ -1.35
CLCC1-209ENST00000482889 RAD21O60216 631 aa6.62□□□□□ -1.35
CLCC1-209ENST00000482889 MMP16P51512 607 aa6.62□□□□□ -1.35
CLCC1-209ENST00000482889 RETREG3Q86VR2 466 aa6.62□□□□□ -1.35
CLCC1-209ENST00000482889 CABLES1Q8TDN4 633 aa6.62□□□□□ -1.35
CLCC1-209ENST00000482889 ZNF330Q9Y3S2 320 aaPredicted RBP6.62□□□□□ -1.35
CLCC1-209ENST00000482889 LILRB3O75022 631 aa6.61□□□□□ -1.35
CLCC1-209ENST00000482889 DXOO77932 396 aaKnown RBP6.61□□□□□ -1.35
CLCC1-209ENST00000482889 PRPF38BQ5VTL8 546 aaKnown RBP6.61□□□□□ -1.35
CLCC1-209ENST00000482889 MTMR2Q13614 643 aa6.6□□□□□ -1.35
CLCC1-209ENST00000482889 TMEM259Q4ZIN3 620 aa6.6□□□□□ -1.35
CLCC1-209ENST00000482889 PRKD2Q9BZL6 878 aa6.6□□□□□ -1.35
CLCC1-209ENST00000482889 PRDM9Q9NQV7 894 aa6.6□□□□□ -1.35
CLCC1-209ENST00000482889 SERPINA10Q9UK55 444 aa6.6□□□□□ -1.35
CLCC1-209ENST00000482889 TBC1D2BQ9UPU7 963 aa6.6□□□□□ -1.35
CLCC1-209ENST00000482889 C6orf229H3BNL8 230 aa6.59□□□□□ -1.35
CLCC1-209ENST00000482889 PPEF1O14829 653 aaPredicted RBP6.59□□□□□ -1.35
CLCC1-209ENST00000482889 LCE2BO14633 110 aa6.58□□□□□ -1.36
CLCC1-209ENST00000482889 AP1G2O75843 785 aa6.58□□□□□ -1.36
CLCC1-209ENST00000482889 JUNDP17535 347 aa6.58□□□□□ -1.36
CLCC1-209ENST00000482889 ABL2P42684 1182 aa6.58□□□□□ -1.36
CLCC1-209ENST00000482889 IRF5Q13568 498 aa6.58□□□□□ -1.36
CLCC1-209ENST00000482889 DESI1Q6ICB0 168 aa6.58□□□□□ -1.36
CLCC1-209ENST00000482889 ADAMTS19Q8TE59 1207 aa6.58□□□□□ -1.36
CLCC1-209ENST00000482889 SYMPKQ92797 1274 aaKnown RBP6.58□□□□□ -1.36
CLCC1-209ENST00000482889 EMID1Q96A84 441 aaPredicted RBP6.58□□□□□ -1.36
CLCC1-209ENST00000482889 CCDC97Q96F63 343 aaPredicted RBP6.58□□□□□ -1.36
CLCC1-209ENST00000482889 ZBTB3Q9H5J0 574 aa6.58□□□□□ -1.36
CLCC1-209ENST00000482889 FCF1Q9Y324 198 aaKnown RBP6.58□□□□□ -1.36
CLCC1-209ENST00000482889 GPR37L1O60883 481 aa6.57□□□□□ -1.36
CLCC1-209ENST00000482889 SLC19A1P41440 591 aa6.57□□□□□ -1.36
CLCC1-209ENST00000482889 RPIAP49247 311 aa6.57□□□□□ -1.36
CLCC1-209ENST00000482889 RETREG2Q8NC44 543 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms