RNA–Protein interactions for RNA: ENST00000481910.1

HPS4-212, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 1,914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-212ENST00000481910 ARHGEF28Q8N1W1 1705 aaKnown RBP16.27■□□□□ 0.2
HPS4-212ENST00000481910 DLC1Q96QB1 1528 aa16.27■□□□□ 0.2
HPS4-212ENST00000481910 CPS1P31327 1500 aa16.26■□□□□ 0.19
HPS4-212ENST00000481910 PTCH1Q13635 1447 aa16.26■□□□□ 0.19
HPS4-212ENST00000481910 HSPA5P11021 654 aaKnown RBP16.26■□□□□ 0.19
HPS4-212ENST00000481910 CENPJQ9HC77 1338 aaPredicted RBP16.26■□□□□ 0.19
HPS4-212ENST00000481910 FAM135BQ49AJ0 1406 aa16.26■□□□□ 0.19
HPS4-212ENST00000481910 RBM33Q96EV2 1170 aaKnown RBP16.25■□□□□ 0.19
HPS4-212ENST00000481910 HIRIP3Q9BW71 556 aaPredicted RBP16.25■□□□□ 0.19
HPS4-212ENST00000481910 PLEKHH1Q9ULM0 1364 aa16.25■□□□□ 0.19
HPS4-212ENST00000481910 NKTRP30414 1462 aaKnown RBP16.25■□□□□ 0.19
HPS4-212ENST00000481910 C14orf37Q86TY3 774 aa16.22■□□□□ 0.19
HPS4-212ENST00000481910 MINK1Q8N4C8 1332 aaPredicted RBP16.21■□□□□ 0.19
HPS4-212ENST00000481910 TMEM94Q12767 1356 aa16.21■□□□□ 0.19
HPS4-212ENST00000481910 QRICH2Q9H0J4 1663 aa16.2■□□□□ 0.18
HPS4-212ENST00000481910 TESK2Q96S53 571 aa16.19■□□□□ 0.18
HPS4-212ENST00000481910 LRRC7Q96NW7 1537 aa16.19■□□□□ 0.18
HPS4-212ENST00000481910 LTBP4Q8N2S1 1624 aa16.19■□□□□ 0.18
HPS4-212ENST00000481910 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.18■□□□□ 0.18
HPS4-212ENST00000481910 NCOA3Q9Y6Q9 1424 aa16.17■□□□□ 0.18
HPS4-212ENST00000481910 SBNO2Q9Y2G9 1366 aa16.16■□□□□ 0.18
HPS4-212ENST00000481910 TMF1P82094 1093 aa16.16■□□□□ 0.18
HPS4-212ENST00000481910 C19orf44Q9H6X5 657 aa16.16■□□□□ 0.18
HPS4-212ENST00000481910 XIRP1Q702N8 1843 aaKnown RBP16.15■□□□□ 0.18
HPS4-212ENST00000481910 EVC2Q86UK5 1308 aa16.15■□□□□ 0.18
HPS4-212ENST00000481910 SCAF1Q9H7N4 1312 aaKnown RBP16.15■□□□□ 0.18
HPS4-212ENST00000481910 ADGRL3Q9HAR2 1447 aa16.15■□□□□ 0.18
HPS4-212ENST00000481910 WASLO00401 505 aaPredicted RBP16.14■□□□□ 0.17
HPS4-212ENST00000481910 NALCNQ8IZF0 1738 aa16.14■□□□□ 0.17
HPS4-212ENST00000481910 CDK19Q9BWU1 502 aa16.13■□□□□ 0.17
HPS4-212ENST00000481910 MSH6P52701 1360 aa16.13■□□□□ 0.17
HPS4-212ENST00000481910 CENPBP07199 599 aaPredicted RBP16.13■□□□□ 0.17
HPS4-212ENST00000481910 SRPK2P78362 688 aaKnown RBP16.13■□□□□ 0.17
HPS4-212ENST00000481910 DISP3Q9P2K9 1392 aa16.12■□□□□ 0.17
HPS4-212ENST00000481910 ATF3P18847 181 aa16.11■□□□□ 0.17
HPS4-212ENST00000481910 ADGRB2O60241 1585 aa16.11■□□□□ 0.17
HPS4-212ENST00000481910 NUTM2FA1L443 756 aa16.11■□□□□ 0.17
HPS4-212ENST00000481910 C11orf95C9JLR9 678 aaPredicted RBP16.11■□□□□ 0.17
HPS4-212ENST00000481910 CABP2Q9NPB3 220 aa16.11■□□□□ 0.17
HPS4-212ENST00000481910 TULP4Q9NRJ4 1543 aa16.1■□□□□ 0.17
HPS4-212ENST00000481910 CDCA8Q53HL2 280 aa16.1■□□□□ 0.17
HPS4-212ENST00000481910 CADPS2Q86UW7 1296 aa16.09■□□□□ 0.17
HPS4-212ENST00000481910 POLR3GLQ9BT43 218 aa16.09■□□□□ 0.17
HPS4-212ENST00000481910 CDC42BPGQ6DT37 1551 aa16.09■□□□□ 0.17
HPS4-212ENST00000481910 ZNF316A6NFI3 1004 aaPredicted RBP16.08■□□□□ 0.16
HPS4-212ENST00000481910 DCCP43146 1447 aa16.08■□□□□ 0.16
HPS4-212ENST00000481910 CERKQ8TCT0 537 aa16.07■□□□□ 0.16
HPS4-212ENST00000481910 PUS7Q96PZ0 661 aaKnown RBP16.07■□□□□ 0.16
HPS4-212ENST00000481910 NUDT16Q96DE0 195 aaKnown RBP16.06■□□□□ 0.16
HPS4-212ENST00000481910 KIF7Q2M1P5 1343 aa16.06■□□□□ 0.16
HPS4-212ENST00000481910 FMN2Q9NZ56 1722 aa16.06■□□□□ 0.16
HPS4-212ENST00000481910 WASHC2AQ641Q2 1341 aa16.05■□□□□ 0.16
HPS4-212ENST00000481910 ATAD2Q6PL18 1390 aa16.04■□□□□ 0.16
HPS4-212ENST00000481910 PRR36Q9H6K5 1346 aa16.04■□□□□ 0.16
HPS4-212ENST00000481910 CCDC61Q9Y6R9 512 aa16.04■□□□□ 0.16
HPS4-212ENST00000481910 CCDC7Q96M83 1385 aa16.04■□□□□ 0.16
HPS4-212ENST00000481910 TMC1Q8TDI8 760 aa16.04■□□□□ 0.16
HPS4-212ENST00000481910 SLAIN2Q9P270 581 aa16.04■□□□□ 0.16
HPS4-212ENST00000481910 RGPD8O14715 1765 aaPredicted RBP16.03■□□□□ 0.16
HPS4-212ENST00000481910 ANKARQ7Z5J8 1434 aa16.03■□□□□ 0.16
HPS4-212ENST00000481910 ESCO1Q5FWF5 840 aa16.03■□□□□ 0.16
HPS4-212ENST00000481910 MST1RQ04912 1400 aa16.02■□□□□ 0.16
HPS4-212ENST00000481910 ATP7BP35670 1465 aa16.02■□□□□ 0.15
HPS4-212ENST00000481910 IQSEC2Q5JU85 1478 aa16.02■□□□□ 0.15
HPS4-212ENST00000481910 USP32Q8NFA0 1604 aa16.02■□□□□ 0.15
HPS4-212ENST00000481910 TOM1O60784 492 aa16.02■□□□□ 0.15
HPS4-212ENST00000481910 CABP1Q9NZU7 370 aa16.02■□□□□ 0.15
HPS4-212ENST00000481910 C1orf167Q5SNV9 1468 aa16.01■□□□□ 0.15
HPS4-212ENST00000481910 ORAI2Q96SN7 254 aa16.01■□□□□ 0.15
HPS4-212ENST00000481910 SLC12A5Q9H2X9 1139 aa16.01■□□□□ 0.15
HPS4-212ENST00000481910 PPIP5K1Q6PFW1 1433 aa16■□□□□ 0.15
HPS4-212ENST00000481910 PMFBP1Q8TBY8 1022 aa16■□□□□ 0.15
HPS4-212ENST00000481910 UBAP1LF5GYI3 381 aa15.99■□□□□ 0.15
HPS4-212ENST00000481910 ITSN1Q15811 1721 aa15.98■□□□□ 0.15
HPS4-212ENST00000481910 PHF8Q9UPP1 1060 aa15.98■□□□□ 0.15
HPS4-212ENST00000481910 PLEKHG3A1L390 1219 aa15.97■□□□□ 0.15
HPS4-212ENST00000481910 NGDNQ8NEJ9 315 aaKnown RBP15.97■□□□□ 0.15
HPS4-212ENST00000481910 NINLQ9Y2I6 1382 aa15.97■□□□□ 0.15
HPS4-212ENST00000481910 TOPAZ1Q8N9V7 1692 aa15.97■□□□□ 0.15
HPS4-212ENST00000481910 BRINP3Q76B58 766 aa15.96■□□□□ 0.15
HPS4-212ENST00000481910 PIP4K2BP78356 416 aa15.96■□□□□ 0.14
HPS4-212ENST00000481910 TERF2IPQ9NYB0 399 aa15.96■□□□□ 0.14
HPS4-212ENST00000481910 ACEP12821 1306 aa15.95■□□□□ 0.14
HPS4-212ENST00000481910 MYOM1P52179 1685 aa15.95■□□□□ 0.14
HPS4-212ENST00000481910 FOXO3O43524 673 aa15.95■□□□□ 0.14
HPS4-212ENST00000481910 DDX10Q13206 875 aaKnown RBP15.95■□□□□ 0.14
HPS4-212ENST00000481910 ARXQ96QS3 562 aa15.95■□□□□ 0.14
HPS4-212ENST00000481910 HDGFL2Q7Z4V5 671 aaPredicted RBP15.94■□□□□ 0.14
HPS4-212ENST00000481910 ZNF692Q9BU19 519 aaPredicted RBP15.94■□□□□ 0.14
HPS4-212ENST00000481910 PANK3Q9H999 370 aa15.94■□□□□ 0.14
HPS4-212ENST00000481910 PSME1Q06323 249 aa15.93■□□□□ 0.14
HPS4-212ENST00000481910 KIF1AQ12756 1690 aa15.92■□□□□ 0.14
HPS4-212ENST00000481910 POLR3AO14802 1390 aaPredicted RBP15.92■□□□□ 0.14
HPS4-212ENST00000481910 ANKRD36BQ8N2N9 1353 aa15.92■□□□□ 0.14
HPS4-212ENST00000481910 A0A1W2PP64 1363 aa15.91■□□□□ 0.14
HPS4-212ENST00000481910 CPSF1Q10570 1443 aaKnown RBP15.91■□□□□ 0.14
HPS4-212ENST00000481910 CD163L1Q9NR16 1453 aa15.91■□□□□ 0.14
HPS4-212ENST00000481910 DDX17Q92841 729 aaKnown RBP15.91■□□□□ 0.14
HPS4-212ENST00000481910 KTN1Q86UP2 1357 aaKnown RBP15.91■□□□□ 0.14
HPS4-212ENST00000481910 ROBO1Q9Y6N7 1651 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms