RNA–Protein interactions for RNA: ENST00000481804.5

CCDC78-211, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,248 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-211ENST00000481804 NSD3Q9BZ95 1437 aa18.19■□□□□ 0.5
CCDC78-211ENST00000481804 MTHFSP49914 203 aa18.19■□□□□ 0.5
CCDC78-211ENST00000481804 PLCH2O75038 1416 aa18.19■□□□□ 0.5
CCDC78-211ENST00000481804 TRPM2O94759 1503 aa18.19■□□□□ 0.5
CCDC78-211ENST00000481804 ERVK-7P63135 1459 aa18.18■□□□□ 0.5
CCDC78-211ENST00000481804 WDR63Q8IWG1 891 aa18.18■□□□□ 0.5
CCDC78-211ENST00000481804 SHROOM2Q13796 1616 aa18.17■□□□□ 0.5
CCDC78-211ENST00000481804 ZKSCAN2Q63HK3 967 aa18.17■□□□□ 0.5
CCDC78-211ENST00000481804 C22orf23Q9BZE7 217 aa18.17■□□□□ 0.5
CCDC78-211ENST00000481804 MYOM1P52179 1685 aa18.17■□□□□ 0.5
CCDC78-211ENST00000481804 SPHKAPQ2M3C7 1700 aa18.16■□□□□ 0.5
CCDC78-211ENST00000481804 MCM4P33991 863 aa18.16■□□□□ 0.5
CCDC78-211ENST00000481804 DZIP1LQ8IYY4 767 aaKnown RBP18.16■□□□□ 0.5
CCDC78-211ENST00000481804 RRAGDQ9NQL2 400 aaPredicted RBP18.16■□□□□ 0.5
CCDC78-211ENST00000481804 MVPQ14764 893 aaKnown RBP18.16■□□□□ 0.5
CCDC78-211ENST00000481804 SMC4Q9NTJ3 1288 aa18.16■□□□□ 0.5
CCDC78-211ENST00000481804 CLTCL1P53675 1640 aa18.16■□□□□ 0.5
CCDC78-211ENST00000481804 ITPRIPQ8IWB1 547 aa18.15■□□□□ 0.5
CCDC78-211ENST00000481804 HSCBQ8IWL3 235 aa18.15■□□□□ 0.5
CCDC78-211ENST00000481804 VIRMAQ69YN4 1812 aaKnown RBP18.15■□□□□ 0.5
CCDC78-211ENST00000481804 CHMP5Q9NZZ3 219 aa18.15■□□□□ 0.5
CCDC78-211ENST00000481804 NLRP1Q9C000 1473 aa18.14■□□□□ 0.49
CCDC78-211ENST00000481804 PTPRTO14522 1441 aa18.14■□□□□ 0.49
CCDC78-211ENST00000481804 NAP1L5Q96NT1 182 aaPredicted RBP18.13■□□□□ 0.49
CCDC78-211ENST00000481804 TSR2Q969E8 191 aaKnown RBP18.13■□□□□ 0.49
CCDC78-211ENST00000481804 ZCCHC11Q5TAX3 1644 aaKnown RBP18.13■□□□□ 0.49
CCDC78-211ENST00000481804 U2SURPO15042 1029 aaKnown RBP18.13■□□□□ 0.49
CCDC78-211ENST00000481804 XRCC6P12956 609 aaKnown RBP eCLIP18.13■□□□□ 0.49
CCDC78-211ENST00000481804 TRAK2O60296 914 aa18.12■□□□□ 0.49
CCDC78-211ENST00000481804 UBE2Q2Q8WVN8 375 aa18.12■□□□□ 0.49
CCDC78-211ENST00000481804 PANK2Q9BZ23 570 aa18.11■□□□□ 0.49
CCDC78-211ENST00000481804 PNNQ9H307 717 aaKnown RBP18.11■□□□□ 0.49
CCDC78-211ENST00000481804 CEP152O94986 1710 aa18.11■□□□□ 0.49
CCDC78-211ENST00000481804 TMEM132EQ6IEE7 984 aa18.1■□□□□ 0.49
CCDC78-211ENST00000481804 ABCC1P33527 1531 aa18.09■□□□□ 0.49
CCDC78-211ENST00000481804 HSP90AA1P07900 732 aaKnown RBP18.08■□□□□ 0.49
CCDC78-211ENST00000481804 UGGT1Q9NYU2 1555 aa18.08■□□□□ 0.49
CCDC78-211ENST00000481804 EXOSC9Q06265 439 aaKnown RBP18.08■□□□□ 0.48
CCDC78-211ENST00000481804 ZMYM3Q14202 1370 aa18.07■□□□□ 0.48
CCDC78-211ENST00000481804 DDX19BQ9UMR2 479 aa18.07■□□□□ 0.48
CCDC78-211ENST00000481804 CCDC27Q2M243 656 aa18.07■□□□□ 0.48
CCDC78-211ENST00000481804 SENP3Q9H4L4 574 aaPredicted RBP18.06■□□□□ 0.48
CCDC78-211ENST00000481804 PHF23Q9BUL5 403 aaPredicted RBP18.06■□□□□ 0.48
CCDC78-211ENST00000481804 DDX11L8A8MPP1 907 aa18.06■□□□□ 0.48
CCDC78-211ENST00000481804 SAFB2Q14151 953 aaKnown RBP eCLIP18.06■□□□□ 0.48
CCDC78-211ENST00000481804 HSP90AB1P08238 724 aaKnown RBP18.05■□□□□ 0.48
CCDC78-211ENST00000481804 TRIM27P14373 513 aa18.05■□□□□ 0.48
CCDC78-211ENST00000481804 RTEL1-TNFRSF6BF6WH68 1400 aa18.05■□□□□ 0.48
CCDC78-211ENST00000481804 NOS1P29475 1434 aa18.05■□□□□ 0.48
CCDC78-211ENST00000481804 MRE11P49959 708 aa18.04■□□□□ 0.48
CCDC78-211ENST00000481804 ABCA6Q8N139 1617 aa18.04■□□□□ 0.48
CCDC78-211ENST00000481804 SSH1Q8WYL5 1049 aa18.04■□□□□ 0.48
CCDC78-211ENST00000481804 MAP3K4Q9Y6R4 1608 aa18.03■□□□□ 0.48
CCDC78-211ENST00000481804 TET3O43151 1660 aa18.03■□□□□ 0.48
CCDC78-211ENST00000481804 NUTM2DQ5VT03 806 aaPredicted RBP18.03■□□□□ 0.48
CCDC78-211ENST00000481804 ATF7IPQ6VMQ6 1270 aa18.03■□□□□ 0.48
CCDC78-211ENST00000481804 LNPKQ9C0E8 428 aa18.03■□□□□ 0.48
CCDC78-211ENST00000481804 FSD2A1L4K1 749 aa18.02■□□□□ 0.48
CCDC78-211ENST00000481804 NOB1Q9ULX3 412 aaKnown RBP18.02■□□□□ 0.48
CCDC78-211ENST00000481804 SBNO2Q9Y2G9 1366 aa18.02■□□□□ 0.48
CCDC78-211ENST00000481804 ZFYVE16Q7Z3T8 1539 aa18.02■□□□□ 0.48
CCDC78-211ENST00000481804 MYOM2P54296 1465 aa18.02■□□□□ 0.48
CCDC78-211ENST00000481804 TRIM44Q96DX7 344 aaPredicted RBP18.02■□□□□ 0.48
CCDC78-211ENST00000481804 KIAA1210Q9ULL0 1709 aa18.02■□□□□ 0.47
CCDC78-211ENST00000481804 HDAC1Q13547 482 aaPredicted RBP18.01■□□□□ 0.47
CCDC78-211ENST00000481804 IQSEC2Q5JU85 1478 aa18.01■□□□□ 0.47
CCDC78-211ENST00000481804 CT47B1P0C2W7 299 aaPredicted RBP18■□□□□ 0.47
CCDC78-211ENST00000481804 FOXD4L1Q9NU39 408 aa18■□□□□ 0.47
CCDC78-211ENST00000481804 TMEM57Q8N5G2 664 aa18■□□□□ 0.47
CCDC78-211ENST00000481804 GRPEL1Q9HAV7 217 aa18■□□□□ 0.47
CCDC78-211ENST00000481804 EVC2Q86UK5 1308 aa18■□□□□ 0.47
CCDC78-211ENST00000481804 IPO8O15397 1037 aaKnown RBP18■□□□□ 0.47
CCDC78-211ENST00000481804 ZNF518AQ6AHZ1 1483 aa18■□□□□ 0.47
CCDC78-211ENST00000481804 CABP2Q9NPB3 220 aa17.99■□□□□ 0.47
CCDC78-211ENST00000481804 GGT6Q6P531 493 aa17.99■□□□□ 0.47
CCDC78-211ENST00000481804 GBP4Q96PP9 640 aa17.99■□□□□ 0.47
CCDC78-211ENST00000481804 TMPOP42166 694 aaKnown RBP17.98■□□□□ 0.47
CCDC78-211ENST00000481804 GGNBP2Q9H3C7 697 aa17.98■□□□□ 0.47
CCDC78-211ENST00000481804 C14orf93Q9H972 538 aaKnown RBP17.97■□□□□ 0.47
CCDC78-211ENST00000481804 ATP7AQ04656 1500 aa17.97■□□□□ 0.47
CCDC78-211ENST00000481804 SHPRHQ149N8 1683 aa17.97■□□□□ 0.47
CCDC78-211ENST00000481804 CLCN1P35523 988 aa17.97■□□□□ 0.47
CCDC78-211ENST00000481804 RIPK4P57078 832 aa17.97■□□□□ 0.47
CCDC78-211ENST00000481804 SRPK2P78362 688 aaKnown RBP17.97■□□□□ 0.47
CCDC78-211ENST00000481804 SMC5Q8IY18 1101 aa17.96■□□□□ 0.47
CCDC78-211ENST00000481804 FANCAO15360 1455 aa17.96■□□□□ 0.47
CCDC78-211ENST00000481804 GLIPR1L2Q4G1C9 344 aa17.96■□□□□ 0.47
CCDC78-211ENST00000481804 KIF1BO60333 1816 aa17.96■□□□□ 0.46
CCDC78-211ENST00000481804 KIF16BQ96L93 1317 aa17.95■□□□□ 0.46
CCDC78-211ENST00000481804 TNPO1Q92973 898 aaKnown RBP17.95■□□□□ 0.46
CCDC78-211ENST00000481804 ANKRD45Q5TZF3 282 aa17.94■□□□□ 0.46
CCDC78-211ENST00000481804 STK26Q9P289 416 aa17.94■□□□□ 0.46
CCDC78-211ENST00000481804 UHRF1BP1LA0JNW5 1464 aa17.93■□□□□ 0.46
CCDC78-211ENST00000481804 CHD1LQ86WJ1 897 aa17.93■□□□□ 0.46
CCDC78-211ENST00000481804 ZBTB40Q9NUA8 1239 aa17.93■□□□□ 0.46
CCDC78-211ENST00000481804 ESPNB1AK53 854 aa17.93■□□□□ 0.46
CCDC78-211ENST00000481804 ADGRL1O94910 1474 aa17.92■□□□□ 0.46
CCDC78-211ENST00000481804 DEPDC5O75140 1603 aa17.92■□□□□ 0.46
CCDC78-211ENST00000481804 CFAP65Q6ZU64 1925 aaKnown RBP17.92■□□□□ 0.46
CCDC78-211ENST00000481804 TRIM35Q9UPQ4 493 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms