RNA–Protein interactions for RNA: ENST00000481300.1

CBX3-207, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-207ENST00000481300 PRR20AP86496 221 aa8.4□□□□□ -1.06
CBX3-207ENST00000481300 USP46P62068 366 aa8.39□□□□□ -1.07
CBX3-207ENST00000481300 Q3C1V9 767 aa8.39□□□□□ -1.07
CBX3-207ENST00000481300 KRI1Q8N9T8 703 aaKnown RBP8.39□□□□□ -1.07
CBX3-207ENST00000481300 TNFRSF10AO00220 468 aa8.38□□□□□ -1.07
CBX3-207ENST00000481300 RPIAP49247 311 aa8.38□□□□□ -1.07
CBX3-207ENST00000481300 GUCA2AQ02747 115 aa8.38□□□□□ -1.07
CBX3-207ENST00000481300 PKD2L1Q9P0L9 805 aa8.37□□□□□ -1.07
CBX3-207ENST00000481300 MMP16P51512 607 aa8.36□□□□□ -1.07
CBX3-207ENST00000481300 USB1Q9BQ65 265 aaKnown RBP8.36□□□□□ -1.07
CBX3-207ENST00000481300 SSTR3P32745 418 aaPredicted RBP8.35□□□□□ -1.07
CBX3-207ENST00000481300 AMHR2Q16671 573 aa8.35□□□□□ -1.07
CBX3-207ENST00000481300 DXOO77932 396 aaKnown RBP8.34□□□□□ -1.07
CBX3-207ENST00000481300 FOXC1Q12948 553 aa8.33□□□□□ -1.08
CBX3-207ENST00000481300 TTLL12Q14166 644 aaPredicted RBP8.33□□□□□ -1.08
CBX3-207ENST00000481300 NUTM1Q86Y26 1132 aa8.33□□□□□ -1.08
CBX3-207ENST00000481300 SYMPKQ92797 1274 aaKnown RBP8.33□□□□□ -1.08
CBX3-207ENST00000481300 DGAT1O75907 488 aa8.32□□□□□ -1.08
CBX3-207ENST00000481300 CD2BP2O95400 341 aaKnown RBP8.32□□□□□ -1.08
CBX3-207ENST00000481300 MYT1Q01538 1121 aa8.32□□□□□ -1.08
CBX3-207ENST00000481300 PKDCCQ504Y2 493 aa8.32□□□□□ -1.08
CBX3-207ENST00000481300 FAM187AA6NFU0 413 aa8.31□□□□□ -1.08
CBX3-207ENST00000481300 GIGYF2Q6Y7W6 1299 aaKnown RBP8.31□□□□□ -1.08
CBX3-207ENST00000481300 SPIRE2Q8WWL2 714 aa8.31□□□□□ -1.08
CBX3-207ENST00000481300 SLC24A3Q9HC58 644 aa8.31□□□□□ -1.08
CBX3-207ENST00000481300 PCDHGC3Q9UN70 934 aa8.31□□□□□ -1.08
CBX3-207ENST00000481300 TRIM66O15016 1216 aa8.29□□□□□ -1.08
CBX3-207ENST00000481300 ZBTB24O43167 697 aaPredicted RBP8.29□□□□□ -1.08
CBX3-207ENST00000481300 FDX1P10109 184 aa8.29□□□□□ -1.08
CBX3-207ENST00000481300 JUNDP17535 347 aa8.28□□□□□ -1.08
CBX3-207ENST00000481300 NDUFV2P19404 249 aa8.28□□□□□ -1.08
CBX3-207ENST00000481300 TRIM32Q13049 653 aa8.28□□□□□ -1.08
CBX3-207ENST00000481300 RETREG3Q86VR2 466 aa8.28□□□□□ -1.08
CBX3-207ENST00000481300 PARP9Q8IXQ6 854 aa8.28□□□□□ -1.08
CBX3-207ENST00000481300 TOR4AQ9NXH8 423 aa8.28□□□□□ -1.08
CBX3-207ENST00000481300 MOXD2PA6NHM9 499 aa8.27□□□□□ -1.09
CBX3-207ENST00000481300 BEGAINQ9BUH8 593 aa8.27□□□□□ -1.09
CBX3-207ENST00000481300 ZNF787Q6DD87 383 aa8.26□□□□□ -1.09
CBX3-207ENST00000481300 CCDC24Q8N4L8 307 aa8.26□□□□□ -1.09
CBX3-207ENST00000481300 AK7Q96M32 723 aa8.26□□□□□ -1.09
CBX3-207ENST00000481300 C6orf229H3BNL8 230 aa8.25□□□□□ -1.09
CBX3-207ENST00000481300 WNT7AO00755 349 aa8.25□□□□□ -1.09
CBX3-207ENST00000481300 MS4A1P11836 297 aa8.25□□□□□ -1.09
CBX3-207ENST00000481300 ST8SIA5O15466 376 aa8.24□□□□□ -1.09
CBX3-207ENST00000481300 CYP4X1Q8N118 509 aa8.24□□□□□ -1.09
CBX3-207ENST00000481300 POTECB2RU33 542 aa8.23□□□□□ -1.09
CBX3-207ENST00000481300 SKOR1P84550 965 aa8.23□□□□□ -1.09
CBX3-207ENST00000481300 TBC1D2Q9BYX2 928 aa8.23□□□□□ -1.09
CBX3-207ENST00000481300 AAASQ9NRG9 546 aa8.23□□□□□ -1.09
CBX3-207ENST00000481300 NEUROD2Q15784 382 aa8.22□□□□□ -1.09
CBX3-207ENST00000481300 PTCRAQ6ISU1 281 aaPredicted RBP8.22□□□□□ -1.09
CBX3-207ENST00000481300 MRGPRX2Q96LB1 330 aa8.22□□□□□ -1.09
CBX3-207ENST00000481300 NUDT12Q9BQG2 462 aa8.22□□□□□ -1.09
CBX3-207ENST00000481300 AVPP01185 164 aa8.21□□□□□ -1.1
CBX3-207ENST00000481300 TTC24A2A3L6 582 aaPredicted RBP8.2□□□□□ -1.1
CBX3-207ENST00000481300 SMPD1P17405 629 aa8.2□□□□□ -1.1
CBX3-207ENST00000481300 PDE4DQ08499 809 aa8.2□□□□□ -1.1
CBX3-207ENST00000481300 RSBN1LQ6PCB5 846 aaPredicted RBP8.2□□□□□ -1.1
CBX3-207ENST00000481300 CRIPAKQ8N1N5 446 aa8.2□□□□□ -1.1
CBX3-207ENST00000481300 PCDHB15Q9Y5E8 787 aa8.2□□□□□ -1.1
CBX3-207ENST00000481300 GJA5P36382 358 aa8.19□□□□□ -1.1
CBX3-207ENST00000481300 BRPF1P55201 1214 aaPredicted RBP8.19□□□□□ -1.1
CBX3-207ENST00000481300 WNT7BP56706 349 aa8.19□□□□□ -1.1
CBX3-207ENST00000481300 MTMR2Q13614 643 aa8.19□□□□□ -1.1
CBX3-207ENST00000481300 RC3H1Q5TC82 1133 aaKnown RBP8.19□□□□□ -1.1
CBX3-207ENST00000481300 SNIP1Q8TAD8 396 aaKnown RBP8.19□□□□□ -1.1
CBX3-207ENST00000481300 PRR7Q8TB68 274 aa8.19□□□□□ -1.1
CBX3-207ENST00000481300 DACH1Q9UI36 760 aa8.19□□□□□ -1.1
CBX3-207ENST00000481300 J3QL48 77 aa8.18□□□□□ -1.1
CBX3-207ENST00000481300 CCNYL3P0C7X3 344 aa8.18□□□□□ -1.1
CBX3-207ENST00000481300 PTPRNQ16849 979 aa8.18□□□□□ -1.1
CBX3-207ENST00000481300 SPDYE5A6NIY4 337 aa8.17□□□□□ -1.1
CBX3-207ENST00000481300 SPTLC1O15269 473 aa8.17□□□□□ -1.1
CBX3-207ENST00000481300 DIXDC1Q155Q3 683 aa8.17□□□□□ -1.1
CBX3-207ENST00000481300 SMCPP49901 116 aaPredicted RBP8.16□□□□□ -1.1
CBX3-207ENST00000481300 DESI1Q6ICB0 168 aa8.16□□□□□ -1.1
CBX3-207ENST00000481300 ZNF775Q96BV0 537 aaPredicted RBP8.16□□□□□ -1.1
CBX3-207ENST00000481300 EVA1BQ9NVM1 165 aa8.16□□□□□ -1.1
CBX3-207ENST00000481300 CFAP99D6REC4 459 aa8.15□□□□□ -1.1
CBX3-207ENST00000481300 AXIN1O15169 862 aa8.15□□□□□ -1.1
CBX3-207ENST00000481300 CTC1Q2NKJ3 1217 aa8.15□□□□□ -1.1
CBX3-207ENST00000481300 RIC3Q7Z5B4 369 aa8.15□□□□□ -1.1
CBX3-207ENST00000481300 HRCP23327 699 aa8.14□□□□□ -1.11
CBX3-207ENST00000481300 SH3BP2P78314 561 aa8.14□□□□□ -1.11
CBX3-207ENST00000481300 UNC93B1Q9H1C4 597 aa8.14□□□□□ -1.11
CBX3-207ENST00000481300 SIAH2O43255 324 aa8.13□□□□□ -1.11
CBX3-207ENST00000481300 KCNH2Q12809 1159 aa8.13□□□□□ -1.11
CBX3-207ENST00000481300 MYSM1Q5VVJ2 828 aa8.13□□□□□ -1.11
CBX3-207ENST00000481300 CABLES1Q8TDN4 633 aa8.13□□□□□ -1.11
CBX3-207ENST00000481300 HPS1Q92902 700 aa8.13□□□□□ -1.11
CBX3-207ENST00000481300 LIMD1Q9UGP4 676 aa8.13□□□□□ -1.11
CBX3-207ENST00000481300 LYPD8Q6UX82 237 aa8.12□□□□□ -1.11
CBX3-207ENST00000481300 ZBTB3Q9H5J0 574 aa8.12□□□□□ -1.11
CBX3-207ENST00000481300 CSPP1Q1MSJ5 1256 aa8.11□□□□□ -1.11
CBX3-207ENST00000481300 TMEM132AQ24JP5 1023 aa8.11□□□□□ -1.11
CBX3-207ENST00000481300 LINC01559Q495D7 138 aa8.11□□□□□ -1.11
CBX3-207ENST00000481300 PRPF38BQ5VTL8 546 aaKnown RBP8.11□□□□□ -1.11
CBX3-207ENST00000481300 EHBP1Q8NDI1 1231 aa8.11□□□□□ -1.11
CBX3-207ENST00000481300 BAP1Q92560 729 aa8.11□□□□□ -1.11
CBX3-207ENST00000481300 GPBP1L1Q9HC44 474 aaPredicted RBP8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms