RNA–Protein interactions for RNA: ENST00000481242.5

GARNL3-216, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 4,816 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-216ENST00000481242 TATP17735 454 aaPredicted RBP11.6□□□□□ -0.55
GARNL3-216ENST00000481242 RBM33Q96EV2 1170 aaKnown RBP11.6□□□□□ -0.55
GARNL3-216ENST00000481242 DCAF8L1A6NGE4 600 aa11.6□□□□□ -0.55
GARNL3-216ENST00000481242 RIC3Q7Z5B4 369 aa11.6□□□□□ -0.55
GARNL3-216ENST00000481242 FAM184AQ8NB25 1140 aa11.6□□□□□ -0.55
GARNL3-216ENST00000481242 SPRYD3Q8NCJ5 442 aa11.6□□□□□ -0.55
GARNL3-216ENST00000481242 BCL2L13Q9BXK5 485 aa11.59□□□□□ -0.55
GARNL3-216ENST00000481242 RAPGEF3O95398 923 aa11.59□□□□□ -0.55
GARNL3-216ENST00000481242 GNAI3P08754 354 aa11.58□□□□□ -0.55
GARNL3-216ENST00000481242 CCDC30Q5VVM6 783 aa11.58□□□□□ -0.55
GARNL3-216ENST00000481242 CTDP1Q9Y5B0 961 aaPredicted RBP11.58□□□□□ -0.55
GARNL3-216ENST00000481242 MTHFSP49914 203 aa11.58□□□□□ -0.56
GARNL3-216ENST00000481242 CD109Q6YHK3 1445 aa11.58□□□□□ -0.56
GARNL3-216ENST00000481242 FAM161AQ3B820 660 aa11.58□□□□□ -0.56
GARNL3-216ENST00000481242 H3BQV1 296 aa11.58□□□□□ -0.56
GARNL3-216ENST00000481242 IFFO2Q5TF58 517 aa11.58□□□□□ -0.56
GARNL3-216ENST00000481242 COG6Q9Y2V7 657 aa11.58□□□□□ -0.56
GARNL3-216ENST00000481242 IQGAP2Q13576 1575 aa11.58□□□□□ -0.56
GARNL3-216ENST00000481242 SLKQ9H2G2 1235 aaPredicted RBP11.57□□□□□ -0.56
GARNL3-216ENST00000481242 RTEL1-TNFRSF6BF6WH68 1400 aa11.56□□□□□ -0.56
GARNL3-216ENST00000481242 HMOX1P09601 288 aa11.56□□□□□ -0.56
GARNL3-216ENST00000481242 CCDC141Q6ZP82 1450 aa11.56□□□□□ -0.56
GARNL3-216ENST00000481242 DAPK1P53355 1430 aa11.56□□□□□ -0.56
GARNL3-216ENST00000481242 TRIM29Q14134 588 aa11.56□□□□□ -0.56
GARNL3-216ENST00000481242 EPRSP07814 1512 aaKnown RBP11.56□□□□□ -0.56
GARNL3-216ENST00000481242 UBTFL1P0CB47 393 aaPredicted RBP11.55□□□□□ -0.56
GARNL3-216ENST00000481242 SF3B2Q13435 895 aaKnown RBP11.55□□□□□ -0.56
GARNL3-216ENST00000481242 SPG7Q9UQ90 795 aa11.55□□□□□ -0.56
GARNL3-216ENST00000481242 CDK19Q9BWU1 502 aa11.55□□□□□ -0.56
GARNL3-216ENST00000481242 CUL7Q14999 1698 aa11.55□□□□□ -0.56
GARNL3-216ENST00000481242 CT47B1P0C2W7 299 aaPredicted RBP11.55□□□□□ -0.56
GARNL3-216ENST00000481242 VPS53Q5VIR6 699 aa11.55□□□□□ -0.56
GARNL3-216ENST00000481242 ERICH2A1L162 156 aa11.54□□□□□ -0.56
GARNL3-216ENST00000481242 CPLX1O14810 134 aa11.54□□□□□ -0.56
GARNL3-216ENST00000481242 SUPT6HQ7KZ85 1726 aaKnown RBP11.54□□□□□ -0.56
GARNL3-216ENST00000481242 APPP05067 770 aa11.54□□□□□ -0.56
GARNL3-216ENST00000481242 DDX11L8A8MPP1 907 aa11.54□□□□□ -0.56
GARNL3-216ENST00000481242 PDE4AP27815 886 aa11.54□□□□□ -0.56
GARNL3-216ENST00000481242 KIF6Q6ZMV9 814 aa11.54□□□□□ -0.56
GARNL3-216ENST00000481242 CCDC47Q96A33 483 aaKnown RBP11.54□□□□□ -0.56
GARNL3-216ENST00000481242 GRIN2AQ12879 1464 aa11.54□□□□□ -0.56
GARNL3-216ENST00000481242 KCNH5Q8NCM2 988 aa11.53□□□□□ -0.56
GARNL3-216ENST00000481242 MAP7D2Q96T17 732 aa11.53□□□□□ -0.56
GARNL3-216ENST00000481242 CCDC61Q9Y6R9 512 aa11.53□□□□□ -0.56
GARNL3-216ENST00000481242 TIAM1Q13009 1591 aa11.53□□□□□ -0.56
GARNL3-216ENST00000481242 NUTM2GQ5VZR2 741 aa11.53□□□□□ -0.56
GARNL3-216ENST00000481242 TCP11L2Q8N4U5 519 aa11.53□□□□□ -0.56
GARNL3-216ENST00000481242 PRDM11Q9NQV5 511 aa11.53□□□□□ -0.56
GARNL3-216ENST00000481242 TCEAL9Q9UHQ7 104 aa11.53□□□□□ -0.56
GARNL3-216ENST00000481242 CEP89Q96ST8 783 aa11.53□□□□□ -0.56
GARNL3-216ENST00000481242 DMRT2Q9Y5R5 561 aa11.53□□□□□ -0.56
GARNL3-216ENST00000481242 ERBINQ96RT1 1412 aa11.53□□□□□ -0.56
GARNL3-216ENST00000481242 INTS3Q68E01 1043 aaKnown RBP11.52□□□□□ -0.56
GARNL3-216ENST00000481242 CLASRPQ8N2M8 674 aaKnown RBP11.52□□□□□ -0.57
GARNL3-216ENST00000481242 CRBNQ96SW2 442 aa11.52□□□□□ -0.57
GARNL3-216ENST00000481242 PRKAR2BP31323 418 aa11.52□□□□□ -0.57
GARNL3-216ENST00000481242 NECTIN2Q92692 538 aa11.52□□□□□ -0.57
GARNL3-216ENST00000481242 PPP2R1AP30153 589 aa11.51□□□□□ -0.57
GARNL3-216ENST00000481242 SKOR2Q2VWA4 1001 aaPredicted RBP11.51□□□□□ -0.57
GARNL3-216ENST00000481242 TOM1L2Q6ZVM7 507 aa11.51□□□□□ -0.57
GARNL3-216ENST00000481242 ERC1Q8IUD2 1116 aa11.51□□□□□ -0.57
GARNL3-216ENST00000481242 ZNF428Q96B54 188 aa11.51□□□□□ -0.57
GARNL3-216ENST00000481242 CABP1Q9NZU7 370 aa11.51□□□□□ -0.57
GARNL3-216ENST00000481242 EXOC6Q8TAG9 804 aa11.51□□□□□ -0.57
GARNL3-216ENST00000481242 SLC26A8Q96RN1 970 aa11.51□□□□□ -0.57
GARNL3-216ENST00000481242 TPM2P07951 284 aa11.51□□□□□ -0.57
GARNL3-216ENST00000481242 TBC1D2BQ9UPU7 963 aa11.5□□□□□ -0.57
GARNL3-216ENST00000481242 RALYLQ86SE5 291 aaKnown RBP11.5□□□□□ -0.57
GARNL3-216ENST00000481242 HOOK1Q9UJC3 728 aaKnown RBP11.5□□□□□ -0.57
GARNL3-216ENST00000481242 BICRAQ9NZM4 1560 aa11.5□□□□□ -0.57
GARNL3-216ENST00000481242 HIP1O00291 1037 aa11.5□□□□□ -0.57
GARNL3-216ENST00000481242 TPM3P06753 285 aa11.5□□□□□ -0.57
GARNL3-216ENST00000481242 TSR1Q2NL82 804 aaKnown RBP11.5□□□□□ -0.57
GARNL3-216ENST00000481242 NOL8Q76FK4 1167 aaKnown RBP11.5□□□□□ -0.57
GARNL3-216ENST00000481242 MTERF4Q7Z6M4 381 aaKnown RBP11.49□□□□□ -0.57
GARNL3-216ENST00000481242 ADGRL1O94910 1474 aa11.49□□□□□ -0.57
GARNL3-216ENST00000481242 AIMP1Q12904 312 aaKnown RBP11.49□□□□□ -0.57
GARNL3-216ENST00000481242 SLC12A5Q9H2X9 1139 aa11.49□□□□□ -0.57
GARNL3-216ENST00000481242 STRN4Q9NRL3 753 aa11.49□□□□□ -0.57
GARNL3-216ENST00000481242 NINLQ9Y2I6 1382 aa11.49□□□□□ -0.57
GARNL3-216ENST00000481242 SAFBQ15424 915 aaKnown RBP eCLIP11.49□□□□□ -0.57
GARNL3-216ENST00000481242 RRP9O43818 475 aaKnown RBP11.49□□□□□ -0.57
GARNL3-216ENST00000481242 NBPF1Q3BBV0 1214 aa11.49□□□□□ -0.57
GARNL3-216ENST00000481242 ZNF530Q6P9A1 599 aaPredicted RBP11.49□□□□□ -0.57
GARNL3-216ENST00000481242 AKNAQ7Z591 1439 aa11.49□□□□□ -0.57
GARNL3-216ENST00000481242 GOLGA6L3A6NEY3 463 aa11.48□□□□□ -0.57
GARNL3-216ENST00000481242 PLIN1O60240 522 aa11.48□□□□□ -0.57
GARNL3-216ENST00000481242 CABP4P57796 275 aa11.48□□□□□ -0.57
GARNL3-216ENST00000481242 TPD52L1Q16890 204 aaPredicted RBP11.48□□□□□ -0.57
GARNL3-216ENST00000481242 NEUROD6Q96NK8 337 aa11.48□□□□□ -0.57
GARNL3-216ENST00000481242 ADAMTS8Q9UP79 889 aa11.48□□□□□ -0.57
GARNL3-216ENST00000481242 DHX16O60231 1041 aaKnown RBP11.48□□□□□ -0.57
GARNL3-216ENST00000481242 TPM1P09493 284 aa11.48□□□□□ -0.57
GARNL3-216ENST00000481242 ANO2Q9NQ90 1003 aa11.48□□□□□ -0.57
GARNL3-216ENST00000481242 GNL3LQ9NVN8 582 aaKnown RBP11.48□□□□□ -0.57
GARNL3-216ENST00000481242 RBM42Q9BTD8 480 aaKnown RBP11.48□□□□□ -0.57
GARNL3-216ENST00000481242 MAP3K1Q13233 1512 aa11.48□□□□□ -0.57
GARNL3-216ENST00000481242 PLB1Q6P1J6 1458 aa11.48□□□□□ -0.57
GARNL3-216ENST00000481242 SULT6B1Q6IMI4 303 aa11.47□□□□□ -0.57
GARNL3-216ENST00000481242 WDR63Q8IWG1 891 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms