RNA–Protein interactions for RNA: ENST00000481231.5

SMARCE1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 695 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-210ENST00000481231 XPCQ01831 940 aaPredicted RBP14.57□□□□□ -0.08
SMARCE1-210ENST00000481231 BRWD3Q6RI45 1802 aa14.56□□□□□ -0.08
SMARCE1-210ENST00000481231 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.55□□□□□ -0.08
SMARCE1-210ENST00000481231 MARF1Q9Y4F3 1742 aaKnown RBP14.55□□□□□ -0.08
SMARCE1-210ENST00000481231 UNC5CLQ8IV45 518 aa14.55□□□□□ -0.08
SMARCE1-210ENST00000481231 SEPT12Q8IYM1 358 aa14.55□□□□□ -0.08
SMARCE1-210ENST00000481231 PXDNQ92626 1479 aa14.55□□□□□ -0.08
SMARCE1-210ENST00000481231 IQGAP3Q86VI3 1631 aa14.55□□□□□ -0.08
SMARCE1-210ENST00000481231 SPHKAPQ2M3C7 1700 aa14.55□□□□□ -0.08
SMARCE1-210ENST00000481231 YY1P25490 414 aa14.54□□□□□ -0.08
SMARCE1-210ENST00000481231 ZNF326Q5BKZ1 582 aaKnown RBP14.54□□□□□ -0.08
SMARCE1-210ENST00000481231 ROBO2Q9HCK4 1378 aa14.54□□□□□ -0.08
SMARCE1-210ENST00000481231 SLIT2O94813 1529 aa14.54□□□□□ -0.08
SMARCE1-210ENST00000481231 NPHP3Q7Z494 1330 aa14.52□□□□□ -0.08
SMARCE1-210ENST00000481231 BAG6P46379 1132 aa14.51□□□□□ -0.09
SMARCE1-210ENST00000481231 R3HDM1Q15032 1099 aaKnown RBP14.51□□□□□ -0.09
SMARCE1-210ENST00000481231 ESCO1Q5FWF5 840 aa14.51□□□□□ -0.09
SMARCE1-210ENST00000481231 FOXO3O43524 673 aa14.5□□□□□ -0.09
SMARCE1-210ENST00000481231 KRT27Q7Z3Y8 459 aa14.5□□□□□ -0.09
SMARCE1-210ENST00000481231 ROCK1Q13464 1354 aa14.49□□□□□ -0.09
SMARCE1-210ENST00000481231 NEXMIFQ5QGS0 1516 aa14.49□□□□□ -0.09
SMARCE1-210ENST00000481231 EN1Q05925 392 aaPredicted RBP14.48□□□□□ -0.09
SMARCE1-210ENST00000481231 CCDC9Q9Y3X0 531 aaKnown RBP14.47□□□□□ -0.09
SMARCE1-210ENST00000481231 USP32Q8NFA0 1604 aa14.47□□□□□ -0.09
SMARCE1-210ENST00000481231 A0A0G2JS52 829 aa14.46□□□□□ -0.09
SMARCE1-210ENST00000481231 MYT1Q01538 1121 aa14.46□□□□□ -0.09
SMARCE1-210ENST00000481231 VPS72Q15906 364 aa14.46□□□□□ -0.09
SMARCE1-210ENST00000481231 NUP155O75694 1391 aa14.46□□□□□ -0.1
SMARCE1-210ENST00000481231 NUTM2FA1L443 756 aa14.45□□□□□ -0.1
SMARCE1-210ENST00000481231 PLEKHG5O94827 1062 aa14.45□□□□□ -0.1
SMARCE1-210ENST00000481231 CDC42BPGQ6DT37 1551 aa14.44□□□□□ -0.1
SMARCE1-210ENST00000481231 HFM1A2PYH4 1435 aa14.43□□□□□ -0.1
SMARCE1-210ENST00000481231 ONECUT3O60422 494 aaPredicted RBP14.43□□□□□ -0.1
SMARCE1-210ENST00000481231 ITGAEP38570 1179 aa14.43□□□□□ -0.1
SMARCE1-210ENST00000481231 FAM182BQ5T319 152 aa14.43□□□□□ -0.1
SMARCE1-210ENST00000481231 SPATA31A3Q5VYP0 1347 aa14.42□□□□□ -0.1
SMARCE1-210ENST00000481231 PRAG1Q86YV5 1406 aa14.42□□□□□ -0.1
SMARCE1-210ENST00000481231 CLTCL1P53675 1640 aa14.42□□□□□ -0.1
SMARCE1-210ENST00000481231 CABLES1Q8TDN4 633 aa14.42□□□□□ -0.1
SMARCE1-210ENST00000481231 PLCH1Q4KWH8 1693 aa14.42□□□□□ -0.1
SMARCE1-210ENST00000481231 HAP1P54257 671 aaPredicted RBP14.41□□□□□ -0.1
SMARCE1-210ENST00000481231 LRPPRCP42704 1394 aaKnown RBP14.41□□□□□ -0.1
SMARCE1-210ENST00000481231 EZH2Q15910 746 aaKnown RBP14.4□□□□□ -0.1
SMARCE1-210ENST00000481231 FAM98CQ17RN3 349 aaKnown RBP14.4□□□□□ -0.1
SMARCE1-210ENST00000481231 PPARGC1BQ86YN6 1023 aaKnown RBP14.39□□□□□ -0.11
SMARCE1-210ENST00000481231 NAIPQ13075 1403 aa14.39□□□□□ -0.11
SMARCE1-210ENST00000481231 RGPD1P0DJD0 1748 aa14.38□□□□□ -0.11
SMARCE1-210ENST00000481231 DISP2A7MBM2 1401 aa14.38□□□□□ -0.11
SMARCE1-210ENST00000481231 CCDC144AA2RUR9 1427 aa14.37□□□□□ -0.11
SMARCE1-210ENST00000481231 NWD2Q9ULI1 1742 aa14.37□□□□□ -0.11
SMARCE1-210ENST00000481231 TNS1Q9HBL0 1735 aaKnown RBP14.36□□□□□ -0.11
SMARCE1-210ENST00000481231 TNS3Q68CZ2 1445 aa14.36□□□□□ -0.11
SMARCE1-210ENST00000481231 KRT28Q7Z3Y7 464 aa14.35□□□□□ -0.11
SMARCE1-210ENST00000481231 FAM83GA6ND36 823 aa14.34□□□□□ -0.11
SMARCE1-210ENST00000481231 ABCA3Q99758 1704 aa14.34□□□□□ -0.11
SMARCE1-210ENST00000481231 VGFO15240 615 aaPredicted RBP14.33□□□□□ -0.12
SMARCE1-210ENST00000481231 WAPLQ7Z5K2 1190 aa14.33□□□□□ -0.12
SMARCE1-210ENST00000481231 CAMKK2Q96RR4 588 aa14.33□□□□□ -0.12
SMARCE1-210ENST00000481231 KIF1AQ12756 1690 aa14.33□□□□□ -0.12
SMARCE1-210ENST00000481231 NRAPQ86VF7 1730 aa14.32□□□□□ -0.12
SMARCE1-210ENST00000481231 IFFO2Q5TF58 517 aa14.32□□□□□ -0.12
SMARCE1-210ENST00000481231 LMOD2Q6P5Q4 547 aa14.32□□□□□ -0.12
SMARCE1-210ENST00000481231 PLEKHH1Q9ULM0 1364 aa14.32□□□□□ -0.12
SMARCE1-210ENST00000481231 ADGRB2O60241 1585 aa14.31□□□□□ -0.12
SMARCE1-210ENST00000481231 SENP3-EIF4A1A0A087X0R7 540 aa14.31□□□□□ -0.12
SMARCE1-210ENST00000481231 BTG4Q9NY30 223 aa14.31□□□□□ -0.12
SMARCE1-210ENST00000481231 STK26Q9P289 416 aa14.31□□□□□ -0.12
SMARCE1-210ENST00000481231 PPP1R1BQ9UD71 204 aaPredicted RBP14.31□□□□□ -0.12
SMARCE1-210ENST00000481231 FMN2Q9NZ56 1722 aa14.3□□□□□ -0.12
SMARCE1-210ENST00000481231 TRIM37O94972 964 aa14.3□□□□□ -0.12
SMARCE1-210ENST00000481231 CAMTA1Q9Y6Y1 1673 aa14.3□□□□□ -0.12
SMARCE1-210ENST00000481231 THSD7AQ9UPZ6 1657 aa14.29□□□□□ -0.12
SMARCE1-210ENST00000481231 KIF1BO60333 1816 aa14.29□□□□□ -0.12
SMARCE1-210ENST00000481231 ZNF784Q8NCA9 323 aaPredicted RBP14.28□□□□□ -0.12
SMARCE1-210ENST00000481231 TECPR2O15040 1411 aa14.27□□□□□ -0.12
SMARCE1-210ENST00000481231 RRBP1Q9P2E9 1410 aaKnown RBP14.27□□□□□ -0.12
SMARCE1-210ENST00000481231 NINLQ9Y2I6 1382 aa14.27□□□□□ -0.12
SMARCE1-210ENST00000481231 DCAF8L1A6NGE4 600 aa14.27□□□□□ -0.13
SMARCE1-210ENST00000481231 APBA3O96018 575 aa14.27□□□□□ -0.13
SMARCE1-210ENST00000481231 SBNO1A3KN83 1393 aa14.26□□□□□ -0.13
SMARCE1-210ENST00000481231 ARHGEF10O15013 1369 aa14.26□□□□□ -0.13
SMARCE1-210ENST00000481231 SPATA31A5Q5VU36 1347 aa14.26□□□□□ -0.13
SMARCE1-210ENST00000481231 SPATA31A7Q8IWB4 1347 aa14.26□□□□□ -0.13
SMARCE1-210ENST00000481231 PSME1Q06323 249 aa14.26□□□□□ -0.13
SMARCE1-210ENST00000481231 SPON1Q9HCB6 807 aa14.26□□□□□ -0.13
SMARCE1-210ENST00000481231 PHF8Q9UPP1 1060 aa14.26□□□□□ -0.13
SMARCE1-210ENST00000481231 NUP188Q5SRE5 1749 aa14.26□□□□□ -0.13
SMARCE1-210ENST00000481231 RREB1Q92766 1687 aa14.26□□□□□ -0.13
SMARCE1-210ENST00000481231 PARD3Q8TEW0 1356 aa14.25□□□□□ -0.13
SMARCE1-210ENST00000481231 PPLO60437 1756 aa14.24□□□□□ -0.13
SMARCE1-210ENST00000481231 NRXN1Q9ULB1 1477 aa14.24□□□□□ -0.13
SMARCE1-210ENST00000481231 UTRNP46939 3433 aa14.24□□□□□ -0.13
SMARCE1-210ENST00000481231 RPGRIP1LQ68CZ1 1315 aa14.23□□□□□ -0.13
SMARCE1-210ENST00000481231 KCNQ2O43526 872 aa14.23□□□□□ -0.13
SMARCE1-210ENST00000481231 COL14A1Q05707 1796 aaKnown RBP14.23□□□□□ -0.13
SMARCE1-210ENST00000481231 ADGRF5Q8IZF2 1346 aa14.22□□□□□ -0.13
SMARCE1-210ENST00000481231 TMEM132EQ6IEE7 984 aa14.22□□□□□ -0.13
SMARCE1-210ENST00000481231 FAM196AQ6ZSG2 479 aa14.22□□□□□ -0.13
SMARCE1-210ENST00000481231 NBPF8Q3BBV2 869 aa14.21□□□□□ -0.13
SMARCE1-210ENST00000481231 NBPF14Q5TI25 921 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms