RNA–Protein interactions for RNA: ENST00000481154.1

PTPN12-211, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 630 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-211ENST00000481154 SLC19A1P41440 591 aa11.52□□□□□ -0.57
PTPN12-211ENST00000481154 PDE4DQ08499 809 aa11.52□□□□□ -0.57
PTPN12-211ENST00000481154 SPIRE2Q8WWL2 714 aa11.52□□□□□ -0.57
PTPN12-211ENST00000481154 BEGAINQ9BUH8 593 aa11.52□□□□□ -0.57
PTPN12-211ENST00000481154 LIAT1Q6ZQX7 453 aa11.51□□□□□ -0.57
PTPN12-211ENST00000481154 SYMPKQ92797 1274 aaKnown RBP11.51□□□□□ -0.57
PTPN12-211ENST00000481154 FCF1Q9Y324 198 aaKnown RBP11.51□□□□□ -0.57
PTPN12-211ENST00000481154 NDUFV2P19404 249 aa11.49□□□□□ -0.57
PTPN12-211ENST00000481154 MSS51Q4VC12 460 aa11.49□□□□□ -0.57
PTPN12-211ENST00000481154 MOXD2PA6NHM9 499 aa11.48□□□□□ -0.57
PTPN12-211ENST00000481154 USB1Q9BQ65 265 aaKnown RBP11.48□□□□□ -0.57
PTPN12-211ENST00000481154 PCDHGC3Q9UN70 934 aa11.48□□□□□ -0.57
PTPN12-211ENST00000481154 FDX1P10109 184 aa11.47□□□□□ -0.57
PTPN12-211ENST00000481154 SPRYD7Q5W111 196 aa11.46□□□□□ -0.57
PTPN12-211ENST00000481154 ZNF787Q6DD87 383 aa11.45□□□□□ -0.58
PTPN12-211ENST00000481154 TBC1D2Q9BYX2 928 aa11.45□□□□□ -0.58
PTPN12-211ENST00000481154 C6orf229H3BNL8 230 aa11.42□□□□□ -0.58
PTPN12-211ENST00000481154 MMP16P51512 607 aa11.42□□□□□ -0.58
PTPN12-211ENST00000481154 ZNF697Q5TEC3 545 aa11.42□□□□□ -0.58
PTPN12-211ENST00000481154 ZNF598Q86UK7 904 aaKnown RBP11.42□□□□□ -0.58
PTPN12-211ENST00000481154 DXOO77932 396 aaKnown RBP11.41□□□□□ -0.58
PTPN12-211ENST00000481154 RETREG3Q86VR2 466 aa11.4□□□□□ -0.58
PTPN12-211ENST00000481154 TNFRSF10AO00220 468 aa11.38□□□□□ -0.59
PTPN12-211ENST00000481154 RSBN1LQ6PCB5 846 aaPredicted RBP11.38□□□□□ -0.59
PTPN12-211ENST00000481154 CCDC24Q8N4L8 307 aa11.38□□□□□ -0.59
PTPN12-211ENST00000481154 ZNF775Q96BV0 537 aaPredicted RBP11.38□□□□□ -0.59
PTPN12-211ENST00000481154 GPBP1L1Q9HC44 474 aaPredicted RBP11.38□□□□□ -0.59
PTPN12-211ENST00000481154 JUNDP17535 347 aa11.37□□□□□ -0.59
PTPN12-211ENST00000481154 MYT1Q01538 1121 aa11.37□□□□□ -0.59
PTPN12-211ENST00000481154 PCDHB15Q9Y5E8 787 aa11.37□□□□□ -0.59
PTPN12-211ENST00000481154 RPIAP49247 311 aa11.36□□□□□ -0.59
PTPN12-211ENST00000481154 PRR20EP86478 221 aa11.36□□□□□ -0.59
PTPN12-211ENST00000481154 PRR20CP86479 221 aa11.36□□□□□ -0.59
PTPN12-211ENST00000481154 PRR20DP86480 221 aa11.36□□□□□ -0.59
PTPN12-211ENST00000481154 PRR20BP86481 221 aa11.36□□□□□ -0.59
PTPN12-211ENST00000481154 PRR20AP86496 221 aa11.36□□□□□ -0.59
PTPN12-211ENST00000481154 ZBTB24O43167 697 aaPredicted RBP11.35□□□□□ -0.59
PTPN12-211ENST00000481154 GDF9O60383 454 aa11.35□□□□□ -0.59
PTPN12-211ENST00000481154 DIXDC1Q155Q3 683 aa11.35□□□□□ -0.59
PTPN12-211ENST00000481154 CSPP1Q1MSJ5 1256 aa11.35□□□□□ -0.59
PTPN12-211ENST00000481154 POTECB2RU33 542 aa11.34□□□□□ -0.59
PTPN12-211ENST00000481154 FOXC1Q12948 553 aa11.34□□□□□ -0.59
PTPN12-211ENST00000481154 MTMR2Q13614 643 aa11.34□□□□□ -0.59
PTPN12-211ENST00000481154 MYSM1Q5VVJ2 828 aa11.34□□□□□ -0.59
PTPN12-211ENST00000481154 RIC3Q7Z5B4 369 aa11.34□□□□□ -0.59
PTPN12-211ENST00000481154 SPTLC1O15269 473 aa11.33□□□□□ -0.6
PTPN12-211ENST00000481154 DGAT1O75907 488 aa11.33□□□□□ -0.6
PTPN12-211ENST00000481154 PRR7Q8TB68 274 aa11.33□□□□□ -0.6
PTPN12-211ENST00000481154 LIMD1Q9UGP4 676 aa11.33□□□□□ -0.6
PTPN12-211ENST00000481154 CD2BP2O95400 341 aaKnown RBP11.32□□□□□ -0.6
PTPN12-211ENST00000481154 PKDCCQ504Y2 493 aa11.32□□□□□ -0.6
PTPN12-211ENST00000481154 KDM4CQ9H3R0 1056 aa11.32□□□□□ -0.6
PTPN12-211ENST00000481154 PKD2L1Q9P0L9 805 aa11.32□□□□□ -0.6
PTPN12-211ENST00000481154 CABLES1Q8TDN4 633 aa11.31□□□□□ -0.6
PTPN12-211ENST00000481154 NUDT12Q9BQG2 462 aa11.31□□□□□ -0.6
PTPN12-211ENST00000481154 HRCP23327 699 aa11.3□□□□□ -0.6
PTPN12-211ENST00000481154 GJA5P36382 358 aa11.3□□□□□ -0.6
PTPN12-211ENST00000481154 TRIM32Q13049 653 aa11.3□□□□□ -0.6
PTPN12-211ENST00000481154 TPRNQ4KMQ1 711 aa11.29□□□□□ -0.6
PTPN12-211ENST00000481154 CFAP99D6REC4 459 aa11.28□□□□□ -0.6
PTPN12-211ENST00000481154 FAM187AA6NFU0 413 aa11.27□□□□□ -0.61
PTPN12-211ENST00000481154 SPDYE5A6NIY4 337 aa11.27□□□□□ -0.61
PTPN12-211ENST00000481154 QPCTQ16769 361 aa11.27□□□□□ -0.61
PTPN12-211ENST00000481154 PTCRAQ6ISU1 281 aaPredicted RBP11.27□□□□□ -0.61
PTPN12-211ENST00000481154 FAM117AQ9C073 453 aa11.27□□□□□ -0.61
PTPN12-211ENST00000481154 ZBTB3Q9H5J0 574 aa11.27□□□□□ -0.61
PTPN12-211ENST00000481154 POLR3EQ9NVU0 708 aa11.27□□□□□ -0.61
PTPN12-211ENST00000481154 CCNYL3P0C7X3 344 aa11.26□□□□□ -0.61
PTPN12-211ENST00000481154 PRKCSHP14314 528 aaPredicted RBP11.26□□□□□ -0.61
PTPN12-211ENST00000481154 CLK2P49760 499 aaKnown RBP11.25□□□□□ -0.61
PTPN12-211ENST00000481154 PTPRNQ16849 979 aa11.25□□□□□ -0.61
PTPN12-211ENST00000481154 ST8SIA5O15466 376 aa11.24□□□□□ -0.61
PTPN12-211ENST00000481154 PRPF38BQ5VTL8 546 aaKnown RBP11.24□□□□□ -0.61
PTPN12-211ENST00000481154 TSC1Q92574 1164 aa11.24□□□□□ -0.61
PTPN12-211ENST00000481154 NUTM2BA6NNL0 878 aaPredicted RBP11.23□□□□□ -0.61
PTPN12-211ENST00000481154 NUTM2EB1AL46 878 aaPredicted RBP11.23□□□□□ -0.61
PTPN12-211ENST00000481154 SKOR1P84550 965 aa11.23□□□□□ -0.61
PTPN12-211ENST00000481154 NUTM2DQ5VT03 806 aaPredicted RBP11.23□□□□□ -0.61
PTPN12-211ENST00000481154 NUTM2AQ8IVF1 878 aaPredicted RBP11.23□□□□□ -0.61
PTPN12-211ENST00000481154 DESI1Q6ICB0 168 aa11.22□□□□□ -0.61
PTPN12-211ENST00000481154 PLEKHG3A1L390 1219 aa11.21□□□□□ -0.61
PTPN12-211ENST00000481154 RSPH6AQ9H0K4 717 aa11.21□□□□□ -0.61
PTPN12-211ENST00000481154 AAASQ9NRG9 546 aa11.21□□□□□ -0.61
PTPN12-211ENST00000481154 WNT7AO00755 349 aa11.2□□□□□ -0.62
PTPN12-211ENST00000481154 LILRB3O75022 631 aa11.2□□□□□ -0.62
PTPN12-211ENST00000481154 RTL5Q5HYW3 569 aaPredicted RBP11.2□□□□□ -0.62
PTPN12-211ENST00000481154 CYP4X1Q8N118 509 aa11.2□□□□□ -0.62
PTPN12-211ENST00000481154 DDRGK1Q96HY6 314 aa11.2□□□□□ -0.62
PTPN12-211ENST00000481154 EVA1BQ9NVM1 165 aa11.2□□□□□ -0.62
PTPN12-211ENST00000481154 TUSC1Q2TAM9 212 aa11.19□□□□□ -0.62
PTPN12-211ENST00000481154 LINC01559Q495D7 138 aa11.19□□□□□ -0.62
PTPN12-211ENST00000481154 LYPD8Q6UX82 237 aa11.19□□□□□ -0.62
PTPN12-211ENST00000481154 MRGPRX2Q96LB1 330 aa11.19□□□□□ -0.62
PTPN12-211ENST00000481154 UNC93B1Q9H1C4 597 aa11.19□□□□□ -0.62
PTPN12-211ENST00000481154 TOR4AQ9NXH8 423 aa11.19□□□□□ -0.62
PTPN12-211ENST00000481154 PER1O15534 1290 aaPredicted RBP11.18□□□□□ -0.62
PTPN12-211ENST00000481154 CTHP32929 405 aa11.18□□□□□ -0.62
PTPN12-211ENST00000481154 KCNH2Q12809 1159 aa11.18□□□□□ -0.62
PTPN12-211ENST00000481154 NEUROD2Q15784 382 aa11.18□□□□□ -0.62
PTPN12-211ENST00000481154 RC3H1Q5TC82 1133 aaKnown RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms