RNA–Protein interactions for RNA: ENST00000481135.1

CUL3-209, Transcript of cullin 3, humanhuman

TSL 3

Gene CUL3, Length 754 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-209ENST00000481135 AP1G2O75843 785 aa17.21■□□□□ 0.35
CUL3-209ENST00000481135 SUPT5HO00267 1087 aaKnown RBP17.19■□□□□ 0.34
CUL3-209ENST00000481135 Q3C1V9 767 aa17.19■□□□□ 0.34
CUL3-209ENST00000481135 A6NJR5 290 aa17.18■□□□□ 0.34
CUL3-209ENST00000481135 MORN1Q5T089 497 aa17.18■□□□□ 0.34
CUL3-209ENST00000481135 HELBQ8NG08 1087 aaPredicted RBP17.17■□□□□ 0.34
CUL3-209ENST00000481135 PRM3Q9NNZ6 103 aa17.17■□□□□ 0.34
CUL3-209ENST00000481135 SNRKQ9NRH2 765 aa17.16■□□□□ 0.34
CUL3-209ENST00000481135 SOCS7O14512 581 aa17.15■□□□□ 0.34
CUL3-209ENST00000481135 PUS10Q3MIT2 529 aaKnown RBP17.15■□□□□ 0.34
CUL3-209ENST00000481135 CLUAP1Q96AJ1 413 aa17.13■□□□□ 0.33
CUL3-209ENST00000481135 PCDHB3Q9Y5E6 796 aa17.13■□□□□ 0.33
CUL3-209ENST00000481135 SLC27A5Q9Y2P5 690 aa17.12■□□□□ 0.33
CUL3-209ENST00000481135 USP17L8P0C7I0 530 aa17.11■□□□□ 0.33
CUL3-209ENST00000481135 APLP1P51693 650 aa17.11■□□□□ 0.33
CUL3-209ENST00000481135 TSC1Q92574 1164 aa17.11■□□□□ 0.33
CUL3-209ENST00000481135 NR1I2O75469 434 aa17.1■□□□□ 0.33
CUL3-209ENST00000481135 POTEGQ6S5H5 508 aa17.1■□□□□ 0.33
CUL3-209ENST00000481135 THSD4Q6ZMP0 1018 aa17.1■□□□□ 0.33
CUL3-209ENST00000481135 RETREG3Q86VR2 466 aa17.1■□□□□ 0.33
CUL3-209ENST00000481135 CDAN1Q8IWY9 1227 aa17.1■□□□□ 0.33
CUL3-209ENST00000481135 NYAP1Q6ZVC0 841 aa17.08■□□□□ 0.32
CUL3-209ENST00000481135 MTMR14Q8NCE2 650 aa17.08■□□□□ 0.32
CUL3-209ENST00000481135 KCTD12Q96CX2 325 aaKnown RBP17.08■□□□□ 0.32
CUL3-209ENST00000481135 WBP1LQ9NX94 342 aa17.08■□□□□ 0.32
CUL3-209ENST00000481135 SALL2Q9Y467 1007 aaPredicted RBP17.08■□□□□ 0.32
CUL3-209ENST00000481135 PRR7Q8TB68 274 aa17.07■□□□□ 0.32
CUL3-209ENST00000481135 POTEMA6NI47 508 aa17.06■□□□□ 0.32
CUL3-209ENST00000481135 SYMPKQ92797 1274 aaKnown RBP17.06■□□□□ 0.32
CUL3-209ENST00000481135 CFAP99D6REC4 459 aa17.05■□□□□ 0.32
CUL3-209ENST00000481135 PROSER2Q86WR7 435 aaPredicted RBP17.05■□□□□ 0.32
CUL3-209ENST00000481135 WWC1Q8IX03 1113 aa17.05■□□□□ 0.32
CUL3-209ENST00000481135 COG6Q9Y2V7 657 aa17.05■□□□□ 0.32
CUL3-209ENST00000481135 CTDSPL2Q05D32 466 aa17.04■□□□□ 0.32
CUL3-209ENST00000481135 TRAK2O60296 914 aa17.03■□□□□ 0.32
CUL3-209ENST00000481135 FMNL1O95466 1100 aaPredicted RBP17.03■□□□□ 0.32
CUL3-209ENST00000481135 SCUBE3Q8IX30 993 aa17.03■□□□□ 0.32
CUL3-209ENST00000481135 POM121Q96HA1 1249 aa17.03■□□□□ 0.32
CUL3-209ENST00000481135 DESI1Q6ICB0 168 aa17.01■□□□□ 0.31
CUL3-209ENST00000481135 USB1Q9BQ65 265 aaKnown RBP17.01■□□□□ 0.31
CUL3-209ENST00000481135 BRICD5Q6PL45 260 aa17■□□□□ 0.31
CUL3-209ENST00000481135 BLOC1S3Q6QNY0 202 aa17■□□□□ 0.31
CUL3-209ENST00000481135 RNF19BQ6ZMZ0 732 aa16.98■□□□□ 0.31
CUL3-209ENST00000481135 GDPD2Q9HCC8 539 aa16.97■□□□□ 0.31
CUL3-209ENST00000481135 NDUFB9Q9Y6M9 179 aa16.97■□□□□ 0.31
CUL3-209ENST00000481135 FNBP4Q8N3X1 1017 aaPredicted RBP16.94■□□□□ 0.3
CUL3-209ENST00000481135 LRRN4Q8WUT4 740 aa16.93■□□□□ 0.3
CUL3-209ENST00000481135 THAP11Q96EK4 314 aa16.93■□□□□ 0.3
CUL3-209ENST00000481135 ABL2P42684 1182 aa16.92■□□□□ 0.3
CUL3-209ENST00000481135 PTPN5P54829 565 aa16.92■□□□□ 0.3
CUL3-209ENST00000481135 COPS2P61201 443 aa16.92■□□□□ 0.3
CUL3-209ENST00000481135 GJD4Q96KN9 370 aaPredicted RBP16.92■□□□□ 0.3
CUL3-209ENST00000481135 TBC1D2BQ9UPU7 963 aa16.92■□□□□ 0.3
CUL3-209ENST00000481135 ZNF330Q9Y3S2 320 aaPredicted RBP16.91■□□□□ 0.3
CUL3-209ENST00000481135 PNMA1Q8ND90 353 aa16.9■□□□□ 0.3
CUL3-209ENST00000481135 HMX1Q9NP08 348 aaPredicted RBP16.9■□□□□ 0.3
CUL3-209ENST00000481135 MYT1LQ9UL68 1186 aa16.9■□□□□ 0.3
CUL3-209ENST00000481135 LYPD8Q6UX82 237 aa16.89■□□□□ 0.29
CUL3-209ENST00000481135 SPSB2Q99619 263 aa16.89■□□□□ 0.29
CUL3-209ENST00000481135 ARID3CA6NKF2 412 aa16.88■□□□□ 0.29
CUL3-209ENST00000481135 JUNDP17535 347 aa16.87■□□□□ 0.29
CUL3-209ENST00000481135 MSS51Q4VC12 460 aa16.87■□□□□ 0.29
CUL3-209ENST00000481135 PER1O15534 1290 aaPredicted RBP16.86■□□□□ 0.29
CUL3-209ENST00000481135 ARXQ96QS3 562 aa16.86■□□□□ 0.29
CUL3-209ENST00000481135 TRIM34Q9BYJ4 488 aa16.86■□□□□ 0.29
CUL3-209ENST00000481135 ZNF777Q9ULD5 760 aaPredicted RBP16.85■□□□□ 0.29
CUL3-209ENST00000481135 ZPR1O75312 459 aa16.84■□□□□ 0.29
CUL3-209ENST00000481135 MTRQ99707 1265 aa16.84■□□□□ 0.29
CUL3-209ENST00000481135 IL21Q9HBE4 155 aa16.84■□□□□ 0.29
CUL3-209ENST00000481135 PTPRNQ16849 979 aa16.83■□□□□ 0.28
CUL3-209ENST00000481135 WASHC4Q2M389 1173 aa16.83■□□□□ 0.28
CUL3-209ENST00000481135 PCDH10Q9P2E7 1040 aa16.83■□□□□ 0.28
CUL3-209ENST00000481135 ADH1BP00325 375 aa16.81■□□□□ 0.28
CUL3-209ENST00000481135 NR6A1Q15406 480 aa16.81■□□□□ 0.28
CUL3-209ENST00000481135 C1orf115Q9H7X2 142 aa16.8■□□□□ 0.28
CUL3-209ENST00000481135 FAM160A2Q8N612 972 aaPredicted RBP16.78■□□□□ 0.28
CUL3-209ENST00000481135 DXOO77932 396 aaKnown RBP16.77■□□□□ 0.28
CUL3-209ENST00000481135 EPS8L1Q8TE68 723 aa16.77■□□□□ 0.28
CUL3-209ENST00000481135 MMP16P51512 607 aa16.76■□□□□ 0.27
CUL3-209ENST00000481135 TJAP1Q5JTD0 557 aa16.76■□□□□ 0.27
CUL3-209ENST00000481135 ARID3AQ99856 593 aa16.76■□□□□ 0.27
CUL3-209ENST00000481135 CCNYL3P0C7X3 344 aa16.75■□□□□ 0.27
CUL3-209ENST00000481135 TLL1O43897 1013 aa16.74■□□□□ 0.27
CUL3-209ENST00000481135 CTHP32929 405 aa16.74■□□□□ 0.27
CUL3-209ENST00000481135 IRF5Q13568 498 aa16.74■□□□□ 0.27
CUL3-209ENST00000481135 CCDC97Q96F63 343 aaPredicted RBP16.74■□□□□ 0.27
CUL3-209ENST00000481135 HCSTQ9UBK5 93 aa16.74■□□□□ 0.27
CUL3-209ENST00000481135 F12P00748 615 aaPredicted RBP16.73■□□□□ 0.27
CUL3-209ENST00000481135 NUDT12Q9BQG2 462 aa16.73■□□□□ 0.27
CUL3-209ENST00000481135 SERPINA10Q9UK55 444 aa16.73■□□□□ 0.27
CUL3-209ENST00000481135 SLC6A16Q9GZN6 736 aa16.72■□□□□ 0.27
CUL3-209ENST00000481135 PLSCR2Q9NRY7 297 aa16.72■□□□□ 0.27
CUL3-209ENST00000481135 HOMEZQ8IX15 550 aa16.71■□□□□ 0.27
CUL3-209ENST00000481135 CCDC82Q8N4S0 544 aa16.71■□□□□ 0.27
CUL3-209ENST00000481135 ARMC2Q8NEN0 867 aa16.7■□□□□ 0.26
CUL3-209ENST00000481135 ZNF516Q92618 1163 aa16.7■□□□□ 0.26
CUL3-209ENST00000481135 RNF166Q96A37 237 aaPredicted RBP16.7■□□□□ 0.26
CUL3-209ENST00000481135 EVA1BQ9NVM1 165 aa16.7■□□□□ 0.26
CUL3-209ENST00000481135 FKBPLQ9UIM3 349 aa16.7■□□□□ 0.26
CUL3-209ENST00000481135 ZC3H4Q9UPT8 1303 aaKnown RBP16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms