RNA–Protein interactions for RNA: ENST00000480853.1

LSG1-208, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 5

Gene LSG1, Length 539 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-208ENST00000480853 SOS2Q07890 1332 aaPredicted RBP25.15■■□□□ 1.62
LSG1-208ENST00000480853 ESCO1Q5FWF5 840 aa25.15■■□□□ 1.62
LSG1-208ENST00000480853 C8orf37Q96NL8 207 aa25.15■■□□□ 1.62
LSG1-208ENST00000480853 LRPPRCP42704 1394 aaKnown RBP25.15■■□□□ 1.62
LSG1-208ENST00000480853 ADAMTS2O95450 1211 aa25.14■■□□□ 1.62
LSG1-208ENST00000480853 RXRBP28702 533 aa25.13■■□□□ 1.61
LSG1-208ENST00000480853 CFAP70Q5T0N1 1121 aa25.13■■□□□ 1.61
LSG1-208ENST00000480853 PIK3C2GO75747 1445 aa25.12■■□□□ 1.61
LSG1-208ENST00000480853 XPCQ01831 940 aaPredicted RBP25.12■■□□□ 1.61
LSG1-208ENST00000480853 ABCC11Q96J66 1382 aa25.12■■□□□ 1.61
LSG1-208ENST00000480853 C14orf93Q9H972 538 aaKnown RBP25.11■■□□□ 1.61
LSG1-208ENST00000480853 FOXO3O43524 673 aa25.1■■□□□ 1.61
LSG1-208ENST00000480853 LAMC1P11047 1609 aa25.09■■□□□ 1.61
LSG1-208ENST00000480853 QTRT2Q9H974 415 aaKnown RBP25.09■■□□□ 1.61
LSG1-208ENST00000480853 TECPR2O15040 1411 aa25.09■■□□□ 1.61
LSG1-208ENST00000480853 YTHDC2Q9H6S0 1430 aaKnown RBP25.08■■□□□ 1.61
LSG1-208ENST00000480853 NGLY1Q96IV0 654 aa25.07■■□□□ 1.6
LSG1-208ENST00000480853 CDC42BPGQ6DT37 1551 aa25.05■■□□□ 1.6
LSG1-208ENST00000480853 SAFB2Q14151 953 aaKnown RBP eCLIP25.04■■□□□ 1.6
LSG1-208ENST00000480853 UPF1Q92900 1129 aaKnown RBP eCLIP25.04■■□□□ 1.6
LSG1-208ENST00000480853 ACIN1Q9UKV3 1341 aaKnown RBP25.04■■□□□ 1.6
LSG1-208ENST00000480853 KDM2AQ9Y2K7 1162 aa25.02■■□□□ 1.6
LSG1-208ENST00000480853 NPHP3Q7Z494 1330 aa25.02■■□□□ 1.6
LSG1-208ENST00000480853 NRXN1Q9ULB1 1477 aa25.02■■□□□ 1.6
LSG1-208ENST00000480853 KNDC1Q76NI1 1749 aa25.01■■□□□ 1.59
LSG1-208ENST00000480853 SIRT1Q96EB6 747 aa25.01■■□□□ 1.59
LSG1-208ENST00000480853 PXDNQ92626 1479 aa25■■□□□ 1.59
LSG1-208ENST00000480853 RBM6P78332 1123 aaKnown RBP24.99■■□□□ 1.59
LSG1-208ENST00000480853 DHX57Q6P158 1386 aaKnown RBP24.99■■□□□ 1.59
LSG1-208ENST00000480853 PRAM1Q96QH2 718 aa24.99■■□□□ 1.59
LSG1-208ENST00000480853 RGPD8O14715 1765 aaPredicted RBP24.98■■□□□ 1.59
LSG1-208ENST00000480853 USP21Q9UK80 565 aa24.97■■□□□ 1.59
LSG1-208ENST00000480853 MYOM2P54296 1465 aa24.96■■□□□ 1.59
LSG1-208ENST00000480853 FMN2Q9NZ56 1722 aa24.96■■□□□ 1.59
LSG1-208ENST00000480853 DCAF11Q8TEB1 546 aa24.96■■□□□ 1.59
LSG1-208ENST00000480853 KRT28Q7Z3Y7 464 aa24.94■■□□□ 1.58
LSG1-208ENST00000480853 FNBP4Q8N3X1 1017 aaPredicted RBP24.94■■□□□ 1.58
LSG1-208ENST00000480853 RGS12O14924 1447 aa24.94■■□□□ 1.58
LSG1-208ENST00000480853 TRAK1Q9UPV9 953 aa24.93■■□□□ 1.58
LSG1-208ENST00000480853 CDK12Q9NYV4 1490 aaPredicted RBP24.93■■□□□ 1.58
LSG1-208ENST00000480853 COL22A1Q8NFW1 1626 aaPredicted RBP24.93■■□□□ 1.58
LSG1-208ENST00000480853 POGKQ9P215 609 aa24.92■■□□□ 1.58
LSG1-208ENST00000480853 PLEKHG5O94827 1062 aa24.91■■□□□ 1.58
LSG1-208ENST00000480853 PHF8Q9UPP1 1060 aa24.91■■□□□ 1.58
LSG1-208ENST00000480853 SPATA31A3Q5VYP0 1347 aa24.9■■□□□ 1.58
LSG1-208ENST00000480853 HRCP23327 699 aa24.9■■□□□ 1.58
LSG1-208ENST00000480853 HIRIP3Q9BW71 556 aaPredicted RBP24.9■■□□□ 1.58
LSG1-208ENST00000480853 PMFBP1Q8TBY8 1022 aa24.88■■□□□ 1.57
LSG1-208ENST00000480853 TRPC5Q9UL62 973 aaPredicted RBP24.88■■□□□ 1.57
LSG1-208ENST00000480853 CABLES1Q8TDN4 633 aa24.87■■□□□ 1.57
LSG1-208ENST00000480853 ADGRB1O14514 1584 aa24.87■■□□□ 1.57
LSG1-208ENST00000480853 MINK1Q8N4C8 1332 aaPredicted RBP24.86■■□□□ 1.57
LSG1-208ENST00000480853 BCL9LQ86UU0 1499 aa24.85■■□□□ 1.57
LSG1-208ENST00000480853 ATRNO75882 1429 aa24.85■■□□□ 1.57
LSG1-208ENST00000480853 DLC1Q96QB1 1528 aa24.83■■□□□ 1.57
LSG1-208ENST00000480853 MARF1Q9Y4F3 1742 aaKnown RBP24.83■■□□□ 1.57
LSG1-208ENST00000480853 KIF1AQ12756 1690 aa24.82■■□□□ 1.56
LSG1-208ENST00000480853 PSME1Q06323 249 aa24.82■■□□□ 1.56
LSG1-208ENST00000480853 LMOD2Q6P5Q4 547 aa24.82■■□□□ 1.56
LSG1-208ENST00000480853 USP32Q8NFA0 1604 aa24.81■■□□□ 1.56
LSG1-208ENST00000480853 PRR36Q9H6K5 1346 aa24.81■■□□□ 1.56
LSG1-208ENST00000480853 GJD4Q96KN9 370 aaPredicted RBP24.78■■□□□ 1.56
LSG1-208ENST00000480853 TNS3Q68CZ2 1445 aa24.77■■□□□ 1.56
LSG1-208ENST00000480853 WASLO00401 505 aaPredicted RBP24.76■■□□□ 1.55
LSG1-208ENST00000480853 UNC5CLQ8IV45 518 aa24.76■■□□□ 1.55
LSG1-208ENST00000480853 HAP1P54257 671 aaPredicted RBP24.74■■□□□ 1.55
LSG1-208ENST00000480853 STAC3Q96MF2 364 aa24.74■■□□□ 1.55
LSG1-208ENST00000480853 SBNO1A3KN83 1393 aa24.74■■□□□ 1.55
LSG1-208ENST00000480853 SLIT2O94813 1529 aa24.73■■□□□ 1.55
LSG1-208ENST00000480853 ANKARQ7Z5J8 1434 aa24.73■■□□□ 1.55
LSG1-208ENST00000480853 NBPF1Q3BBV0 1214 aa24.72■■□□□ 1.55
LSG1-208ENST00000480853 ADGRB2O60241 1585 aa24.71■■□□□ 1.55
LSG1-208ENST00000480853 FAM83GA6ND36 823 aa24.71■■□□□ 1.55
LSG1-208ENST00000480853 ATAD2Q6PL18 1390 aa24.68■■□□□ 1.54
LSG1-208ENST00000480853 RALGAPBQ86X10 1494 aa24.68■■□□□ 1.54
LSG1-208ENST00000480853 GLI3P10071 1580 aa24.67■■□□□ 1.54
LSG1-208ENST00000480853 NGDNQ8NEJ9 315 aaKnown RBP24.67■■□□□ 1.54
LSG1-208ENST00000480853 NUDT16Q96DE0 195 aaKnown RBP24.67■■□□□ 1.54
LSG1-208ENST00000480853 ARHGEF28Q8N1W1 1705 aaKnown RBP24.66■■□□□ 1.54
LSG1-208ENST00000480853 CDK19Q9BWU1 502 aa24.66■■□□□ 1.54
LSG1-208ENST00000480853 TRPM3Q9HCF6 1732 aaPredicted RBP24.66■■□□□ 1.54
LSG1-208ENST00000480853 ARHGEF10O15013 1369 aa24.66■■□□□ 1.54
LSG1-208ENST00000480853 TULP4Q9NRJ4 1543 aa24.66■■□□□ 1.54
LSG1-208ENST00000480853 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.65■■□□□ 1.54
LSG1-208ENST00000480853 PAK3O75914 559 aaPredicted RBP24.64■■□□□ 1.54
LSG1-208ENST00000480853 GPRASP1Q5JY77 1395 aa24.64■■□□□ 1.53
LSG1-208ENST00000480853 ABCA3Q99758 1704 aa24.64■■□□□ 1.53
LSG1-208ENST00000480853 VPS72Q15906 364 aa24.63■■□□□ 1.53
LSG1-208ENST00000480853 CCDC9Q9Y3X0 531 aaKnown RBP24.63■■□□□ 1.53
LSG1-208ENST00000480853 EP400Q96L91 3159 aa24.62■■□□□ 1.53
LSG1-208ENST00000480853 SEPT12Q8IYM1 358 aa24.61■■□□□ 1.53
LSG1-208ENST00000480853 SIN3AQ96ST3 1273 aa24.61■■□□□ 1.53
LSG1-208ENST00000480853 BRWD3Q6RI45 1802 aa24.61■■□□□ 1.53
LSG1-208ENST00000480853 PLCH1Q4KWH8 1693 aa24.6■■□□□ 1.53
LSG1-208ENST00000480853 ALS2Q96Q42 1657 aa24.6■■□□□ 1.53
LSG1-208ENST00000480853 EIF3AQ14152 1382 aaKnown RBP24.6■■□□□ 1.53
LSG1-208ENST00000480853 NUTM2GQ5VZR2 741 aa24.59■■□□□ 1.53
LSG1-208ENST00000480853 BTG4Q9NY30 223 aa24.59■■□□□ 1.53
LSG1-208ENST00000480853 ATP7BP35670 1465 aa24.58■■□□□ 1.52
LSG1-208ENST00000480853 L3MBTL2Q969R5 705 aa24.57■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms