RNA–Protein interactions for RNA: ENST00000480171.7

PKP4-210, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-210ENST00000480171 BCAR3O75815 825 aa11.22□□□□□ -0.61
PKP4-210ENST00000480171 CNKSR2Q8WXI2 1034 aa11.22□□□□□ -0.61
PKP4-210ENST00000480171 SBNO2Q9Y2G9 1366 aa11.21□□□□□ -0.61
PKP4-210ENST00000480171 ADGRF5Q8IZF2 1346 aa11.21□□□□□ -0.61
PKP4-210ENST00000480171 CENPJQ9HC77 1338 aaPredicted RBP11.21□□□□□ -0.61
PKP4-210ENST00000480171 CARD14Q9BXL6 1004 aa11.21□□□□□ -0.61
PKP4-210ENST00000480171 SPINK5Q9NQ38 1064 aaPredicted RBP11.21□□□□□ -0.61
PKP4-210ENST00000480171 NFKBIBQ15653 356 aa11.2□□□□□ -0.62
PKP4-210ENST00000480171 ABCA9Q8IUA7 1624 aa11.2□□□□□ -0.62
PKP4-210ENST00000480171 MAPK8IP3Q9UPT6 1336 aa11.19□□□□□ -0.62
PKP4-210ENST00000480171 MYO3AQ8NEV4 1616 aa11.19□□□□□ -0.62
PKP4-210ENST00000480171 MORC1Q86VD1 984 aa11.19□□□□□ -0.62
PKP4-210ENST00000480171 ADGRL1O94910 1474 aa11.19□□□□□ -0.62
PKP4-210ENST00000480171 SLC4A3P48751 1232 aa11.19□□□□□ -0.62
PKP4-210ENST00000480171 AAMPQ13685 434 aa11.19□□□□□ -0.62
PKP4-210ENST00000480171 GSE1Q14687 1217 aa11.19□□□□□ -0.62
PKP4-210ENST00000480171 EFCAB6Q5THR3 1501 aa11.19□□□□□ -0.62
PKP4-210ENST00000480171 WWC1Q8IX03 1113 aa11.18□□□□□ -0.62
PKP4-210ENST00000480171 IFT172Q9UG01 1749 aa11.18□□□□□ -0.62
PKP4-210ENST00000480171 CLUAP1Q96AJ1 413 aa11.18□□□□□ -0.62
PKP4-210ENST00000480171 NRXN1Q9ULB1 1477 aa11.18□□□□□ -0.62
PKP4-210ENST00000480171 RUNDC1Q96C34 613 aa11.17□□□□□ -0.62
PKP4-210ENST00000480171 UGGT1Q9NYU2 1555 aa11.17□□□□□ -0.62
PKP4-210ENST00000480171 MROH1Q8NDA8 1641 aa11.17□□□□□ -0.62
PKP4-210ENST00000480171 SETBP1Q9Y6X0 1596 aa11.17□□□□□ -0.62
PKP4-210ENST00000480171 CFAP53Q96M91 514 aa11.16□□□□□ -0.62
PKP4-210ENST00000480171 NSD3Q9BZ95 1437 aa11.16□□□□□ -0.62
PKP4-210ENST00000480171 CHGAP10645 457 aaKnown RBP11.16□□□□□ -0.62
PKP4-210ENST00000480171 PMFBP1Q8TBY8 1022 aa11.16□□□□□ -0.62
PKP4-210ENST00000480171 IGHDP01880 384 aa11.16□□□□□ -0.62
PKP4-210ENST00000480171 LMTK2Q8IWU2 1503 aa11.16□□□□□ -0.62
PKP4-210ENST00000480171 WDR63Q8IWG1 891 aa11.15□□□□□ -0.62
PKP4-210ENST00000480171 COG6Q9Y2V7 657 aa11.15□□□□□ -0.62
PKP4-210ENST00000480171 DMRT2Q9Y5R5 561 aa11.15□□□□□ -0.62
PKP4-210ENST00000480171 NOS1P29475 1434 aa11.15□□□□□ -0.62
PKP4-210ENST00000480171 FRAT1Q92837 279 aaPredicted RBP11.15□□□□□ -0.63
PKP4-210ENST00000480171 MROH2AA6NES4 1674 aa11.14□□□□□ -0.63
PKP4-210ENST00000480171 BECN1Q14457 450 aa11.14□□□□□ -0.63
PKP4-210ENST00000480171 PPRC1Q5VV67 1664 aaKnown RBP11.14□□□□□ -0.63
PKP4-210ENST00000480171 VIRMAQ69YN4 1812 aaKnown RBP11.14□□□□□ -0.63
PKP4-210ENST00000480171 PANK1Q8TE04 598 aa11.14□□□□□ -0.63
PKP4-210ENST00000480171 TRAK1Q9UPV9 953 aa11.14□□□□□ -0.63
PKP4-210ENST00000480171 ADGRB3O60242 1522 aa11.14□□□□□ -0.63
PKP4-210ENST00000480171 NEUROD2Q15784 382 aa11.13□□□□□ -0.63
PKP4-210ENST00000480171 TCP11L2Q8N4U5 519 aa11.13□□□□□ -0.63
PKP4-210ENST00000480171 RPGRIP1LQ68CZ1 1315 aa11.13□□□□□ -0.63
PKP4-210ENST00000480171 RARSP54136 660 aaKnown RBP11.13□□□□□ -0.63
PKP4-210ENST00000480171 VSIG10Q8N0Z9 540 aa11.13□□□□□ -0.63
PKP4-210ENST00000480171 C14orf93Q9H972 538 aaKnown RBP11.13□□□□□ -0.63
PKP4-210ENST00000480171 TNNT2P45379 298 aaPredicted RBP11.12□□□□□ -0.63
PKP4-210ENST00000480171 IL27Q8NEV9 243 aa11.12□□□□□ -0.63
PKP4-210ENST00000480171 UPF2Q9HAU5 1272 aaKnown RBP11.12□□□□□ -0.63
PKP4-210ENST00000480171 CCDC27Q2M243 656 aa11.12□□□□□ -0.63
PKP4-210ENST00000480171 SLC12A5Q9H2X9 1139 aa11.12□□□□□ -0.63
PKP4-210ENST00000480171 MYH16Q9H6N6 1097 aa11.12□□□□□ -0.63
PKP4-210ENST00000480171 SHPRHQ149N8 1683 aa11.12□□□□□ -0.63
PKP4-210ENST00000480171 QRICH2Q9H0J4 1663 aa11.12□□□□□ -0.63
PKP4-210ENST00000480171 ZNF518AQ6AHZ1 1483 aa11.12□□□□□ -0.63
PKP4-210ENST00000480171 FGD1P98174 961 aa11.11□□□□□ -0.63
PKP4-210ENST00000480171 PUS7Q96PZ0 661 aaKnown RBP11.11□□□□□ -0.63
PKP4-210ENST00000480171 USP32Q8NFA0 1604 aa11.11□□□□□ -0.63
PKP4-210ENST00000480171 KIDINS220Q9ULH0 1771 aa11.11□□□□□ -0.63
PKP4-210ENST00000480171 ZMYM3Q14202 1370 aa11.11□□□□□ -0.63
PKP4-210ENST00000480171 RRP7AQ9Y3A4 280 aaKnown RBP11.11□□□□□ -0.63
PKP4-210ENST00000480171 ZC3H13Q5T200 1668 aaKnown RBP11.11□□□□□ -0.63
PKP4-210ENST00000480171 RWDD1Q9H446 243 aaPredicted RBP11.11□□□□□ -0.63
PKP4-210ENST00000480171 IQSEC2Q5JU85 1478 aa11.1□□□□□ -0.63
PKP4-210ENST00000480171 NSD2O96028 1365 aa11.1□□□□□ -0.63
PKP4-210ENST00000480171 MTHFSP49914 203 aa11.1□□□□□ -0.63
PKP4-210ENST00000480171 EVC2Q86UK5 1308 aa11.1□□□□□ -0.63
PKP4-210ENST00000480171 PPLO60437 1756 aa11.1□□□□□ -0.63
PKP4-210ENST00000480171 FRAT2O75474 233 aaPredicted RBP11.09□□□□□ -0.63
PKP4-210ENST00000480171 ASXL2Q76L83 1435 aa11.09□□□□□ -0.63
PKP4-210ENST00000480171 USP19O94966 1318 aa11.08□□□□□ -0.64
PKP4-210ENST00000480171 ADGRB1O14514 1584 aa11.08□□□□□ -0.64
PKP4-210ENST00000480171 NPATQ14207 1427 aa11.07□□□□□ -0.64
PKP4-210ENST00000480171 CT47B1P0C2W7 299 aaPredicted RBP11.07□□□□□ -0.64
PKP4-210ENST00000480171 U2AF1L5P0DN76 240 aaPredicted RBP11.07□□□□□ -0.64
PKP4-210ENST00000480171 U2AF1Q01081 240 aaKnown RBP eCLIP11.07□□□□□ -0.64
PKP4-210ENST00000480171 TMEM132EQ6IEE7 984 aa11.07□□□□□ -0.64
PKP4-210ENST00000480171 ANKRD36BQ8N2N9 1353 aa11.07□□□□□ -0.64
PKP4-210ENST00000480171 GGT6Q6P531 493 aa11.07□□□□□ -0.64
PKP4-210ENST00000480171 VGFO15240 615 aaPredicted RBP11.06□□□□□ -0.64
PKP4-210ENST00000480171 PDZRN3Q9UPQ7 1066 aa11.06□□□□□ -0.64
PKP4-210ENST00000480171 PCDHB15Q9Y5E8 787 aa11.06□□□□□ -0.64
PKP4-210ENST00000480171 CFAP74Q9C0B2 1584 aa11.06□□□□□ -0.64
PKP4-210ENST00000480171 NPM1P06748 294 aaKnown RBP eCLIP11.06□□□□□ -0.64
PKP4-210ENST00000480171 ZKSCAN2Q63HK3 967 aa11.06□□□□□ -0.64
PKP4-210ENST00000480171 SEC24BO95487 1268 aa11.05□□□□□ -0.64
PKP4-210ENST00000480171 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.05□□□□□ -0.64
PKP4-210ENST00000480171 FTSJ3Q8IY81 847 aaKnown RBP11.05□□□□□ -0.64
PKP4-210ENST00000480171 BCL2L13Q9BXK5 485 aa11.05□□□□□ -0.64
PKP4-210ENST00000480171 RLBP1P12271 317 aa11.05□□□□□ -0.64
PKP4-210ENST00000480171 MVPQ14764 893 aaKnown RBP11.05□□□□□ -0.64
PKP4-210ENST00000480171 DZIP1LQ8IYY4 767 aaKnown RBP11.05□□□□□ -0.64
PKP4-210ENST00000480171 BRPF3Q9ULD4 1205 aa11.05□□□□□ -0.64
PKP4-210ENST00000480171 MLH3Q9UHC1 1453 aa11.05□□□□□ -0.64
PKP4-210ENST00000480171 CFAP65Q6ZU64 1925 aaKnown RBP11.04□□□□□ -0.64
PKP4-210ENST00000480171 GLI2P10070 1586 aa11.04□□□□□ -0.64
PKP4-210ENST00000480171 POGZQ7Z3K3 1410 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms