RNA–Protein interactions for RNA: ENST00000480158.1

HERC4-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,438 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-210ENST00000480158 LRPPRCP42704 1394 aaKnown RBP9□□□□□ -0.97
HERC4-210ENST00000480158 C11orf95C9JLR9 678 aaPredicted RBP8.99□□□□□ -0.97
HERC4-210ENST00000480158 ROBO2Q9HCK4 1378 aa8.99□□□□□ -0.97
HERC4-210ENST00000480158 SETD1AO15047 1707 aaKnown RBP8.99□□□□□ -0.97
HERC4-210ENST00000480158 ZNF335Q9H4Z2 1342 aaPredicted RBP8.99□□□□□ -0.97
HERC4-210ENST00000480158 EIF3AQ14152 1382 aaKnown RBP8.99□□□□□ -0.97
HERC4-210ENST00000480158 C14orf37Q86TY3 774 aa8.98□□□□□ -0.97
HERC4-210ENST00000480158 ABCC11Q96J66 1382 aa8.98□□□□□ -0.97
HERC4-210ENST00000480158 TESK2Q96S53 571 aa8.97□□□□□ -0.97
HERC4-210ENST00000480158 NUTM2FA1L443 756 aa8.97□□□□□ -0.97
HERC4-210ENST00000480158 PROSER2Q86WR7 435 aaPredicted RBP8.97□□□□□ -0.97
HERC4-210ENST00000480158 DIP2AQ14689 1571 aa8.96□□□□□ -0.97
HERC4-210ENST00000480158 DISP3Q9P2K9 1392 aa8.96□□□□□ -0.98
HERC4-210ENST00000480158 PIK3R4Q99570 1358 aa8.95□□□□□ -0.98
HERC4-210ENST00000480158 SRPK2P78362 688 aaKnown RBP8.95□□□□□ -0.98
HERC4-210ENST00000480158 TMF1P82094 1093 aa8.95□□□□□ -0.98
HERC4-210ENST00000480158 POTEHQ6S545 545 aa8.95□□□□□ -0.98
HERC4-210ENST00000480158 CABP2Q9NPB3 220 aa8.95□□□□□ -0.98
HERC4-210ENST00000480158 WASHC2AQ641Q2 1341 aa8.94□□□□□ -0.98
HERC4-210ENST00000480158 ARHGEF28Q8N1W1 1705 aaKnown RBP8.94□□□□□ -0.98
HERC4-210ENST00000480158 KIF7Q2M1P5 1343 aa8.94□□□□□ -0.98
HERC4-210ENST00000480158 DDX10Q13206 875 aaKnown RBP8.94□□□□□ -0.98
HERC4-210ENST00000480158 TECPR2O15040 1411 aa8.93□□□□□ -0.98
HERC4-210ENST00000480158 CDK19Q9BWU1 502 aa8.93□□□□□ -0.98
HERC4-210ENST00000480158 CHD2O14647 1828 aaKnown RBP8.93□□□□□ -0.98
HERC4-210ENST00000480158 QRICH2Q9H0J4 1663 aa8.92□□□□□ -0.98
HERC4-210ENST00000480158 EVC2Q86UK5 1308 aa8.92□□□□□ -0.98
HERC4-210ENST00000480158 FAM135BQ49AJ0 1406 aa8.92□□□□□ -0.98
HERC4-210ENST00000480158 CNGB1Q14028 1251 aaPredicted RBP8.92□□□□□ -0.98
HERC4-210ENST00000480158 TMC1Q8TDI8 760 aa8.92□□□□□ -0.98
HERC4-210ENST00000480158 SIRT1Q96EB6 747 aa8.92□□□□□ -0.98
HERC4-210ENST00000480158 TMEM94Q12767 1356 aa8.92□□□□□ -0.98
HERC4-210ENST00000480158 CPS1P31327 1500 aa8.92□□□□□ -0.98
HERC4-210ENST00000480158 XRN1Q8IZH2 1706 aaKnown RBP8.91□□□□□ -0.98
HERC4-210ENST00000480158 DLC1Q96QB1 1528 aa8.91□□□□□ -0.98
HERC4-210ENST00000480158 PTCH1Q13635 1447 aa8.91□□□□□ -0.98
HERC4-210ENST00000480158 CCDC7Q96M83 1385 aa8.91□□□□□ -0.98
HERC4-210ENST00000480158 WASLO00401 505 aaPredicted RBP8.91□□□□□ -0.98
HERC4-210ENST00000480158 STRCP1A6NGW2 1772 aa8.91□□□□□ -0.98
HERC4-210ENST00000480158 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.9□□□□□ -0.98
HERC4-210ENST00000480158 SLC12A5Q9H2X9 1139 aa8.9□□□□□ -0.99
HERC4-210ENST00000480158 KNDC1Q76NI1 1749 aa8.9□□□□□ -0.99
HERC4-210ENST00000480158 TULP4Q9NRJ4 1543 aa8.89□□□□□ -0.99
HERC4-210ENST00000480158 CDCA8Q53HL2 280 aa8.89□□□□□ -0.99
HERC4-210ENST00000480158 SBNO2Q9Y2G9 1366 aa8.89□□□□□ -0.99
HERC4-210ENST00000480158 NWD1Q149M9 1564 aa8.89□□□□□ -0.99
HERC4-210ENST00000480158 NUDT16Q96DE0 195 aaKnown RBP8.89□□□□□ -0.99
HERC4-210ENST00000480158 NKTRP30414 1462 aaKnown RBP8.88□□□□□ -0.99
HERC4-210ENST00000480158 ATF3P18847 181 aa8.88□□□□□ -0.99
HERC4-210ENST00000480158 C19orf44Q9H6X5 657 aa8.88□□□□□ -0.99
HERC4-210ENST00000480158 CABP1Q9NZU7 370 aa8.88□□□□□ -0.99
HERC4-210ENST00000480158 LRRC7Q96NW7 1537 aa8.88□□□□□ -0.99
HERC4-210ENST00000480158 PMFBP1Q8TBY8 1022 aa8.88□□□□□ -0.99
HERC4-210ENST00000480158 PRR36Q9H6K5 1346 aa8.87□□□□□ -0.99
HERC4-210ENST00000480158 ADGRL3Q9HAR2 1447 aa8.87□□□□□ -0.99
HERC4-210ENST00000480158 ESCO1Q5FWF5 840 aa8.86□□□□□ -0.99
HERC4-210ENST00000480158 PANK3Q9H999 370 aa8.86□□□□□ -0.99
HERC4-210ENST00000480158 MSH6P52701 1360 aa8.86□□□□□ -0.99
HERC4-210ENST00000480158 NALCNQ8IZF0 1738 aa8.86□□□□□ -0.99
HERC4-210ENST00000480158 DIEXFQ68CQ4 756 aaKnown RBP8.85□□□□□ -0.99
HERC4-210ENST00000480158 ORAI2Q96SN7 254 aa8.85□□□□□ -0.99
HERC4-210ENST00000480158 CCDC61Q9Y6R9 512 aa8.85□□□□□ -0.99
HERC4-210ENST00000480158 PPIP5K1Q6PFW1 1433 aa8.84□□□□□ -0.99
HERC4-210ENST00000480158 ATAD2Q6PL18 1390 aa8.84□□□□□ -0.99
HERC4-210ENST00000480158 PLCB2Q00722 1185 aa8.84□□□□□ -0.99
HERC4-210ENST00000480158 CADPS2Q86UW7 1296 aa8.84□□□□□ -0.99
HERC4-210ENST00000480158 ATF5Q9Y2D1 282 aaPredicted RBP8.84□□□□□ -0.99
HERC4-210ENST00000480158 XPCQ01831 940 aaPredicted RBP8.83□□□□□ -1
HERC4-210ENST00000480158 NGDNQ8NEJ9 315 aaKnown RBP8.83□□□□□ -1
HERC4-210ENST00000480158 DDX17Q92841 729 aaKnown RBP8.83□□□□□ -1
HERC4-210ENST00000480158 LTBP4Q8N2S1 1624 aa8.83□□□□□ -1
HERC4-210ENST00000480158 FOXO3O43524 673 aa8.83□□□□□ -1
HERC4-210ENST00000480158 CARD14Q9BXL6 1004 aa8.83□□□□□ -1
HERC4-210ENST00000480158 SLAIN2Q9P270 581 aa8.83□□□□□ -1
HERC4-210ENST00000480158 ATP7BP35670 1465 aa8.83□□□□□ -1
HERC4-210ENST00000480158 ACEP12821 1306 aa8.82□□□□□ -1
HERC4-210ENST00000480158 ADGRB2O60241 1585 aa8.82□□□□□ -1
HERC4-210ENST00000480158 PLEKHG5O94827 1062 aa8.82□□□□□ -1
HERC4-210ENST00000480158 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.82□□□□□ -1
HERC4-210ENST00000480158 PIP4K2BP78356 416 aa8.82□□□□□ -1
HERC4-210ENST00000480158 HDGFL2Q7Z4V5 671 aaPredicted RBP8.82□□□□□ -1
HERC4-210ENST00000480158 PUS7Q96PZ0 661 aaKnown RBP8.82□□□□□ -1
HERC4-210ENST00000480158 TERF2IPQ9NYB0 399 aa8.82□□□□□ -1
HERC4-210ENST00000480158 PHF8Q9UPP1 1060 aa8.82□□□□□ -1
HERC4-210ENST00000480158 XIRP1Q702N8 1843 aaKnown RBP8.82□□□□□ -1
HERC4-210ENST00000480158 CDC42BPGQ6DT37 1551 aa8.81□□□□□ -1
HERC4-210ENST00000480158 CC2D1BQ5T0F9 858 aaKnown RBP8.81□□□□□ -1
HERC4-210ENST00000480158 NCOA3Q9Y6Q9 1424 aa8.81□□□□□ -1
HERC4-210ENST00000480158 A0A1W2PP64 1363 aa8.81□□□□□ -1
HERC4-210ENST00000480158 USP32Q8NFA0 1604 aa8.81□□□□□ -1
HERC4-210ENST00000480158 RGPD8O14715 1765 aaPredicted RBP8.81□□□□□ -1
HERC4-210ENST00000480158 PAK3O75914 559 aaPredicted RBP8.81□□□□□ -1
HERC4-210ENST00000480158 KNSTRNQ9Y448 316 aa8.81□□□□□ -1
HERC4-210ENST00000480158 C1orf167Q5SNV9 1468 aa8.8□□□□□ -1
HERC4-210ENST00000480158 MST1RQ04912 1400 aa8.8□□□□□ -1
HERC4-210ENST00000480158 PSME1Q06323 249 aa8.8□□□□□ -1
HERC4-210ENST00000480158 MYOM1P52179 1685 aa8.8□□□□□ -1
HERC4-210ENST00000480158 KTN1Q86UP2 1357 aaKnown RBP8.8□□□□□ -1
HERC4-210ENST00000480158 FMN2Q9NZ56 1722 aa8.8□□□□□ -1
HERC4-210ENST00000480158 PLEKHG3A1L390 1219 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms