RNA–Protein interactions for RNA: ENST00000479977.6

VAV3-205, Transcript of vav guanine nucleotide exchange factor 3, humanhuman

TSL 4

Gene VAV3, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAV3-205ENST00000479977 TRIM66O15016 1216 aa8.91□□□□□ -0.98
VAV3-205ENST00000479977 PRKCSHP14314 528 aaPredicted RBP8.91□□□□□ -0.98
VAV3-205ENST00000479977 RPIAP49247 311 aa8.91□□□□□ -0.98
VAV3-205ENST00000479977 RNF19BQ6ZMZ0 732 aa8.91□□□□□ -0.98
VAV3-205ENST00000479977 AAASQ9NRG9 546 aa8.9□□□□□ -0.98
VAV3-205ENST00000479977 CD2BP2O95400 341 aaKnown RBP8.89□□□□□ -0.99
VAV3-205ENST00000479977 AMHR2Q16671 573 aa8.89□□□□□ -0.99
VAV3-205ENST00000479977 CYP4X1Q8N118 509 aa8.89□□□□□ -0.99
VAV3-205ENST00000479977 ZBTB24O43167 697 aaPredicted RBP8.88□□□□□ -0.99
VAV3-205ENST00000479977 MDM2Q00987 491 aaPredicted RBP8.88□□□□□ -0.99
VAV3-205ENST00000479977 GRIPAP1Q4V328 841 aa8.88□□□□□ -0.99
VAV3-205ENST00000479977 BRICD5Q6PL45 260 aa8.88□□□□□ -0.99
VAV3-205ENST00000479977 REPIN1Q9BWE0 567 aaKnown RBP8.87□□□□□ -0.99
VAV3-205ENST00000479977 MSS51Q4VC12 460 aa8.86□□□□□ -0.99
VAV3-205ENST00000479977 TOR4AQ9NXH8 423 aa8.85□□□□□ -0.99
VAV3-205ENST00000479977 SALL2Q9Y467 1007 aaPredicted RBP8.85□□□□□ -0.99
VAV3-205ENST00000479977 TTC24A2A3L6 582 aaPredicted RBP8.84□□□□□ -0.99
VAV3-205ENST00000479977 CLCN1P35523 988 aa8.84□□□□□ -0.99
VAV3-205ENST00000479977 PDE4DQ08499 809 aa8.84□□□□□ -0.99
VAV3-205ENST00000479977 PARP9Q8IXQ6 854 aa8.84□□□□□ -0.99
VAV3-205ENST00000479977 GPCPD1Q9NPB8 672 aa8.84□□□□□ -0.99
VAV3-205ENST00000479977 DACH1Q9UI36 760 aa8.84□□□□□ -0.99
VAV3-205ENST00000479977 AXIN1O15169 862 aa8.83□□□□□ -1
VAV3-205ENST00000479977 CD46P15529 392 aa8.83□□□□□ -1
VAV3-205ENST00000479977 Q3C1V9 767 aa8.83□□□□□ -1
VAV3-205ENST00000479977 TTLL12Q14166 644 aaPredicted RBP8.82□□□□□ -1
VAV3-205ENST00000479977 FAM217BQ9NTX9 383 aaPredicted RBP8.82□□□□□ -1
VAV3-205ENST00000479977 KDM4AO75164 1064 aa8.81□□□□□ -1
VAV3-205ENST00000479977 TRIM32Q13049 653 aa8.81□□□□□ -1
VAV3-205ENST00000479977 GIGYF2Q6Y7W6 1299 aaKnown RBP8.81□□□□□ -1
VAV3-205ENST00000479977 CRIPAKQ8N1N5 446 aa8.81□□□□□ -1
VAV3-205ENST00000479977 HLA-CQ95604 372 aa8.81□□□□□ -1
VAV3-205ENST00000479977 GMPR2Q9P2T1 348 aaKnown RBP8.81□□□□□ -1
VAV3-205ENST00000479977 AVPP01185 164 aa8.8□□□□□ -1
VAV3-205ENST00000479977 MMP16P51512 607 aa8.79□□□□□ -1
VAV3-205ENST00000479977 CCDC24Q8N4L8 307 aa8.79□□□□□ -1
VAV3-205ENST00000479977 USB1Q9BQ65 265 aaKnown RBP8.79□□□□□ -1
VAV3-205ENST00000479977 WNT7AO00755 349 aa8.78□□□□□ -1
VAV3-205ENST00000479977 CTC1Q2NKJ3 1217 aa8.78□□□□□ -1
VAV3-205ENST00000479977 C11orf95C9JLR9 678 aaPredicted RBP8.77□□□□□ -1.01
VAV3-205ENST00000479977 MS4A1P11836 297 aa8.77□□□□□ -1.01
VAV3-205ENST00000479977 SSTR3P32745 418 aaPredicted RBP8.77□□□□□ -1.01
VAV3-205ENST00000479977 MRGPRX2Q96LB1 330 aa8.77□□□□□ -1.01
VAV3-205ENST00000479977 DXOO77932 396 aaKnown RBP8.76□□□□□ -1.01
VAV3-205ENST00000479977 GUCA2AQ02747 115 aa8.76□□□□□ -1.01
VAV3-205ENST00000479977 GPBP1L1Q9HC44 474 aaPredicted RBP8.76□□□□□ -1.01
VAV3-205ENST00000479977 HOXA2O43364 376 aa8.75□□□□□ -1.01
VAV3-205ENST00000479977 SMPD1P17405 629 aa8.75□□□□□ -1.01
VAV3-205ENST00000479977 USP46P62068 366 aa8.75□□□□□ -1.01
VAV3-205ENST00000479977 TREML4Q6UXN2 200 aa8.75□□□□□ -1.01
VAV3-205ENST00000479977 SNIP1Q8TAD8 396 aaKnown RBP8.75□□□□□ -1.01
VAV3-205ENST00000479977 J3QL48 77 aa8.74□□□□□ -1.01
VAV3-205ENST00000479977 SMCPP49901 116 aaPredicted RBP8.74□□□□□ -1.01
VAV3-205ENST00000479977 BRPF1P55201 1214 aaPredicted RBP8.72□□□□□ -1.01
VAV3-205ENST00000479977 SYMPKQ92797 1274 aaKnown RBP8.72□□□□□ -1.01
VAV3-205ENST00000479977 KDM4CQ9H3R0 1056 aa8.72□□□□□ -1.01
VAV3-205ENST00000479977 BEGAINQ9BUH8 593 aa8.71□□□□□ -1.02
VAV3-205ENST00000479977 ATP13A2Q9NQ11 1180 aa8.71□□□□□ -1.02
VAV3-205ENST00000479977 WFS1O76024 890 aa8.7□□□□□ -1.02
VAV3-205ENST00000479977 SKOR1P84550 965 aa8.7□□□□□ -1.02
VAV3-205ENST00000479977 NEUROD2Q15784 382 aa8.7□□□□□ -1.02
VAV3-205ENST00000479977 RC3H1Q5TC82 1133 aaKnown RBP8.7□□□□□ -1.02
VAV3-205ENST00000479977 NUTM1Q86Y26 1132 aa8.7□□□□□ -1.02
VAV3-205ENST00000479977 JUNDP17535 347 aa8.69□□□□□ -1.02
VAV3-205ENST00000479977 LCE2AQ5TA79 106 aaPredicted RBP8.69□□□□□ -1.02
VAV3-205ENST00000479977 HPS1Q92902 700 aa8.69□□□□□ -1.02
VAV3-205ENST00000479977 SNRPBP14678 240 aaKnown RBP8.67□□□□□ -1.02
VAV3-205ENST00000479977 WNT7BP56706 349 aa8.67□□□□□ -1.02
VAV3-205ENST00000479977 SPIRE2Q8WWL2 714 aa8.67□□□□□ -1.02
VAV3-205ENST00000479977 NUDT12Q9BQG2 462 aa8.67□□□□□ -1.02
VAV3-205ENST00000479977 FAM117AQ9C073 453 aa8.67□□□□□ -1.02
VAV3-205ENST00000479977 C6orf229H3BNL8 230 aa8.66□□□□□ -1.02
VAV3-205ENST00000479977 ALDH1A1P00352 501 aa8.66□□□□□ -1.02
VAV3-205ENST00000479977 RETREG3Q86VR2 466 aa8.66□□□□□ -1.02
VAV3-205ENST00000479977 TBC1D2Q9BYX2 928 aa8.65□□□□□ -1.02
VAV3-205ENST00000479977 SENP2Q9HC62 589 aa8.65□□□□□ -1.02
VAV3-205ENST00000479977 PLEKHG3A1L390 1219 aa8.64□□□□□ -1.03
VAV3-205ENST00000479977 FDX1P10109 184 aa8.64□□□□□ -1.03
VAV3-205ENST00000479977 NFX1Q12986 1120 aaKnown RBP8.64□□□□□ -1.03
VAV3-205ENST00000479977 EHBP1Q8NDI1 1231 aa8.64□□□□□ -1.03
VAV3-205ENST00000479977 TRIM47Q96LD4 638 aa8.64□□□□□ -1.03
VAV3-205ENST00000479977 PTCRAQ6ISU1 281 aaPredicted RBP8.63□□□□□ -1.03
VAV3-205ENST00000479977 MOXD2PA6NHM9 499 aa8.62□□□□□ -1.03
VAV3-205ENST00000479977 DDRGK1Q96HY6 314 aa8.62□□□□□ -1.03
VAV3-205ENST00000479977 PCDHGC3Q9UN70 934 aa8.62□□□□□ -1.03
VAV3-205ENST00000479977 NISCHQ9Y2I1 1504 aa8.62□□□□□ -1.03
VAV3-205ENST00000479977 NDUFV2P19404 249 aa8.61□□□□□ -1.03
VAV3-205ENST00000479977 WASF2Q9Y6W5 498 aa8.61□□□□□ -1.03
VAV3-205ENST00000479977 CCNYL3P0C7X3 344 aa8.6□□□□□ -1.03
VAV3-205ENST00000479977 BMP1P13497 986 aa8.6□□□□□ -1.03
VAV3-205ENST00000479977 DIXDC1Q155Q3 683 aa8.6□□□□□ -1.03
VAV3-205ENST00000479977 MYSM1Q5VVJ2 828 aa8.6□□□□□ -1.03
VAV3-205ENST00000479977 KIFC2Q96AC6 838 aa8.6□□□□□ -1.03
VAV3-205ENST00000479977 TERTO14746 1132 aaKnown RBP8.59□□□□□ -1.03
VAV3-205ENST00000479977 LINC01559Q495D7 138 aa8.59□□□□□ -1.03
VAV3-205ENST00000479977 RSBN1LQ6PCB5 846 aaPredicted RBP8.59□□□□□ -1.03
VAV3-205ENST00000479977 SPTLC1O15269 473 aa8.58□□□□□ -1.04
VAV3-205ENST00000479977 IL27Q8NEV9 243 aa8.58□□□□□ -1.04
VAV3-205ENST00000479977 GJA5P36382 358 aa8.57□□□□□ -1.04
VAV3-205ENST00000479977 SH3BP2P78314 561 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms