RNA–Protein interactions for RNA: ENST00000479485.5

SSR1-207, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 2

Gene SSR1, Length 640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-207ENST00000479485 KDM4CQ9H3R0 1056 aa9.68□□□□□ -0.86
SSR1-207ENST00000479485 PCDHB3Q9Y5E6 796 aa9.68□□□□□ -0.86
SSR1-207ENST00000479485 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.67□□□□□ -0.86
SSR1-207ENST00000479485 CLCN1P35523 988 aa9.67□□□□□ -0.86
SSR1-207ENST00000479485 REPIN1Q9BWE0 567 aaKnown RBP9.67□□□□□ -0.86
SSR1-207ENST00000479485 GPCPD1Q9NPB8 672 aa9.67□□□□□ -0.86
SSR1-207ENST00000479485 DNAJB2P25686 324 aa9.66□□□□□ -0.86
SSR1-207ENST00000479485 NECTIN2Q92692 538 aa9.65□□□□□ -0.86
SSR1-207ENST00000479485 TOR4AQ9NXH8 423 aa9.65□□□□□ -0.86
SSR1-207ENST00000479485 SLF2Q8IX21 1173 aa9.64□□□□□ -0.87
SSR1-207ENST00000479485 TMEM134Q9H6X4 195 aa9.64□□□□□ -0.87
SSR1-207ENST00000479485 SMCPP49901 116 aaPredicted RBP9.63□□□□□ -0.87
SSR1-207ENST00000479485 CTC1Q2NKJ3 1217 aa9.63□□□□□ -0.87
SSR1-207ENST00000479485 ZSCAN1Q8NBB4 408 aa9.62□□□□□ -0.87
SSR1-207ENST00000479485 MS4A1P11836 297 aa9.61□□□□□ -0.87
SSR1-207ENST00000479485 FAM217BQ9NTX9 383 aaPredicted RBP9.61□□□□□ -0.87
SSR1-207ENST00000479485 DAXXQ9UER7 740 aaPredicted RBP9.61□□□□□ -0.87
SSR1-207ENST00000479485 FAM117AQ9C073 453 aa9.59□□□□□ -0.87
SSR1-207ENST00000479485 SSTR3P32745 418 aaPredicted RBP9.58□□□□□ -0.88
SSR1-207ENST00000479485 GMPRP36959 345 aa9.58□□□□□ -0.88
SSR1-207ENST00000479485 ATP13A2Q9NQ11 1180 aa9.58□□□□□ -0.88
SSR1-207ENST00000479485 DDX11L8A8MPP1 907 aa9.57□□□□□ -0.88
SSR1-207ENST00000479485 SULF1Q8IWU6 871 aa9.56□□□□□ -0.88
SSR1-207ENST00000479485 IL27Q8NEV9 243 aa9.56□□□□□ -0.88
SSR1-207ENST00000479485 TRIM47Q96LD4 638 aa9.56□□□□□ -0.88
SSR1-207ENST00000479485 CYP4X1Q8N118 509 aa9.55□□□□□ -0.88
SSR1-207ENST00000479485 DDRGK1Q96HY6 314 aa9.55□□□□□ -0.88
SSR1-207ENST00000479485 PRR14Q9BWN1 585 aa9.55□□□□□ -0.88
SSR1-207ENST00000479485 PLEKHG3A1L390 1219 aa9.54□□□□□ -0.88
SSR1-207ENST00000479485 ADH1BP00325 375 aa9.54□□□□□ -0.88
SSR1-207ENST00000479485 CD46P15529 392 aa9.54□□□□□ -0.88
SSR1-207ENST00000479485 TMEM132AQ24JP5 1023 aa9.54□□□□□ -0.88
SSR1-207ENST00000479485 RDH13Q8NBN7 331 aa9.54□□□□□ -0.88
SSR1-207ENST00000479485 BEGAINQ9BUH8 593 aa9.54□□□□□ -0.88
SSR1-207ENST00000479485 KCTD17Q8N5Z5 321 aa9.53□□□□□ -0.88
SSR1-207ENST00000479485 SLC4A3P48751 1232 aa9.52□□□□□ -0.89
SSR1-207ENST00000479485 SLC6A16Q9GZN6 736 aa9.52□□□□□ -0.89
SSR1-207ENST00000479485 SLC10A3P09131 477 aa9.5□□□□□ -0.89
SSR1-207ENST00000479485 SLC16A10Q8TF71 515 aa9.49□□□□□ -0.89
SSR1-207ENST00000479485 SENP2Q9HC62 589 aa9.48□□□□□ -0.89
SSR1-207ENST00000479485 CFHP08603 1231 aa9.47□□□□□ -0.89
SSR1-207ENST00000479485 ACTN4O43707 911 aaKnown RBP9.46□□□□□ -0.9
SSR1-207ENST00000479485 GSK3AP49840 483 aa9.46□□□□□ -0.9
SSR1-207ENST00000479485 RSPH4AQ5TD94 716 aa9.46□□□□□ -0.9
SSR1-207ENST00000479485 SMPD1P17405 629 aa9.45□□□□□ -0.9
SSR1-207ENST00000479485 GCGRP47871 477 aa9.45□□□□□ -0.9
SSR1-207ENST00000479485 RPIAP49247 311 aa9.45□□□□□ -0.9
SSR1-207ENST00000479485 SPIRE2Q8WWL2 714 aa9.45□□□□□ -0.9
SSR1-207ENST00000479485 TBC1D2Q9BYX2 928 aa9.45□□□□□ -0.9
SSR1-207ENST00000479485 TTC24A2A3L6 582 aaPredicted RBP9.44□□□□□ -0.9
SSR1-207ENST00000479485 SH3D19Q5HYK7 790 aa9.44□□□□□ -0.9
SSR1-207ENST00000479485 NUTM1Q86Y26 1132 aa9.44□□□□□ -0.9
SSR1-207ENST00000479485 NXF1Q9UBU9 619 aaKnown RBP9.44□□□□□ -0.9
SSR1-207ENST00000479485 MYSM1Q5VVJ2 828 aa9.43□□□□□ -0.9
SSR1-207ENST00000479485 KDM4AO75164 1064 aa9.42□□□□□ -0.9
SSR1-207ENST00000479485 VEGFBP49765 207 aa9.42□□□□□ -0.9
SSR1-207ENST00000479485 RSPH6AQ9H0K4 717 aa9.42□□□□□ -0.9
SSR1-207ENST00000479485 ERBB4Q15303 1308 aa9.41□□□□□ -0.9
SSR1-207ENST00000479485 DIXDC1Q155Q3 683 aa9.41□□□□□ -0.9
SSR1-207ENST00000479485 KMT5BQ4FZB7 885 aa9.41□□□□□ -0.9
SSR1-207ENST00000479485 IRF7Q92985 503 aa9.41□□□□□ -0.9
SSR1-207ENST00000479485 HOXA2O43364 376 aa9.4□□□□□ -0.9
SSR1-207ENST00000479485 CD2BP2O95400 341 aaKnown RBP9.4□□□□□ -0.9
SSR1-207ENST00000479485 FUT2Q10981 343 aa9.4□□□□□ -0.9
SSR1-207ENST00000479485 KCNMA1Q12791 1236 aa9.4□□□□□ -0.9
SSR1-207ENST00000479485 KIFC2Q96AC6 838 aa9.4□□□□□ -0.9
SSR1-207ENST00000479485 MOXD2PA6NHM9 499 aa9.39□□□□□ -0.91
SSR1-207ENST00000479485 CLK2P49760 499 aaKnown RBP9.39□□□□□ -0.91
SSR1-207ENST00000479485 USP46P62068 366 aa9.39□□□□□ -0.91
SSR1-207ENST00000479485 GOPCQ9HD26 462 aa9.39□□□□□ -0.91
SSR1-207ENST00000479485 POLR3EQ9NVU0 708 aa9.39□□□□□ -0.91
SSR1-207ENST00000479485 NR1I2O75469 434 aa9.38□□□□□ -0.91
SSR1-207ENST00000479485 SKIV2LQ15477 1246 aaKnown RBP9.38□□□□□ -0.91
SSR1-207ENST00000479485 HLA-CQ95604 372 aa9.38□□□□□ -0.91
SSR1-207ENST00000479485 PCMTD1Q96MG8 357 aaPredicted RBP9.38□□□□□ -0.91
SSR1-207ENST00000479485 J3QL48 77 aa9.37□□□□□ -0.91
SSR1-207ENST00000479485 NDUFV2P19404 249 aa9.37□□□□□ -0.91
SSR1-207ENST00000479485 XP32Q5T750 250 aa9.37□□□□□ -0.91
SSR1-207ENST00000479485 RSBN1LQ6PCB5 846 aaPredicted RBP9.37□□□□□ -0.91
SSR1-207ENST00000479485 LIMD1Q9UGP4 676 aa9.37□□□□□ -0.91
SSR1-207ENST00000479485 GUCA2AQ02747 115 aa9.36□□□□□ -0.91
SSR1-207ENST00000479485 RIC3Q7Z5B4 369 aa9.36□□□□□ -0.91
SSR1-207ENST00000479485 SCUBE3Q8IX30 993 aa9.36□□□□□ -0.91
SSR1-207ENST00000479485 HPS1Q92902 700 aa9.36□□□□□ -0.91
SSR1-207ENST00000479485 ATP1B4Q9UN42 357 aaPredicted RBP9.36□□□□□ -0.91
SSR1-207ENST00000479485 FCF1Q9Y324 198 aaKnown RBP9.36□□□□□ -0.91
SSR1-207ENST00000479485 H3BM21 787 aa9.35□□□□□ -0.91
SSR1-207ENST00000479485 PUS10Q3MIT2 529 aaKnown RBP9.35□□□□□ -0.91
SSR1-207ENST00000479485 PROCA1Q8NCQ7 364 aaPredicted RBP9.35□□□□□ -0.91
SSR1-207ENST00000479485 SPSB2Q99619 263 aa9.35□□□□□ -0.91
SSR1-207ENST00000479485 SPTLC1O15269 473 aa9.34□□□□□ -0.91
SSR1-207ENST00000479485 ATP6V1AP38606 617 aa9.34□□□□□ -0.91
SSR1-207ENST00000479485 GRIPAP1Q4V328 841 aa9.34□□□□□ -0.91
SSR1-207ENST00000479485 SNIP1Q8TAD8 396 aaKnown RBP9.34□□□□□ -0.91
SSR1-207ENST00000479485 FDX1P10109 184 aa9.33□□□□□ -0.92
SSR1-207ENST00000479485 CSPP1Q1MSJ5 1256 aa9.33□□□□□ -0.92
SSR1-207ENST00000479485 NPAS3Q8IXF0 933 aa9.33□□□□□ -0.92
SSR1-207ENST00000479485 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.33□□□□□ -0.92
SSR1-207ENST00000479485 KRTAP4-8Q9BYQ9 185 aa9.33□□□□□ -0.92
SSR1-207ENST00000479485 GJA5P36382 358 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms