RNA–Protein interactions for RNA: ENST00000479414.1

CCDC58-204, Transcript of coiled-coil domain containing 58, humanhuman

TSL 3

Gene CCDC58, Length 431 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-204ENST00000479414 ZPR1O75312 459 aa11.63□□□□□ -0.55
CCDC58-204ENST00000479414 QPCTQ16769 361 aa11.63□□□□□ -0.55
CCDC58-204ENST00000479414 CSPP1Q1MSJ5 1256 aa11.63□□□□□ -0.55
CCDC58-204ENST00000479414 PPP2R2DQ66LE6 453 aa11.63□□□□□ -0.55
CCDC58-204ENST00000479414 BRICD5Q6PL45 260 aa11.63□□□□□ -0.55
CCDC58-204ENST00000479414 ZBTB3Q9H5J0 574 aa11.63□□□□□ -0.55
CCDC58-204ENST00000479414 ITGBL1O95965 494 aaPredicted RBP11.62□□□□□ -0.55
CCDC58-204ENST00000479414 HRCP23327 699 aa11.62□□□□□ -0.55
CCDC58-204ENST00000479414 RNF19BQ6ZMZ0 732 aa11.62□□□□□ -0.55
CCDC58-204ENST00000479414 SPDYE5A6NIY4 337 aa11.61□□□□□ -0.55
CCDC58-204ENST00000479414 FMNL1O95466 1100 aaPredicted RBP11.61□□□□□ -0.55
CCDC58-204ENST00000479414 MTMR2Q13614 643 aa11.61□□□□□ -0.55
CCDC58-204ENST00000479414 CABLES1Q8TDN4 633 aa11.61□□□□□ -0.55
CCDC58-204ENST00000479414 ZNF516Q92618 1163 aa11.61□□□□□ -0.55
CCDC58-204ENST00000479414 ATP1B4Q9UN42 357 aaPredicted RBP11.61□□□□□ -0.55
CCDC58-204ENST00000479414 C6orf229H3BNL8 230 aa11.6□□□□□ -0.55
CCDC58-204ENST00000479414 FBXO31Q5XUX0 539 aaPredicted RBP11.6□□□□□ -0.55
CCDC58-204ENST00000479414 RETREG3Q86VR2 466 aa11.6□□□□□ -0.55
CCDC58-204ENST00000479414 SYMPKQ92797 1274 aaKnown RBP11.59□□□□□ -0.55
CCDC58-204ENST00000479414 NUTM2BA6NNL0 878 aaPredicted RBP11.58□□□□□ -0.56
CCDC58-204ENST00000479414 NUTM2EB1AL46 878 aaPredicted RBP11.58□□□□□ -0.56
CCDC58-204ENST00000479414 RTL5Q5HYW3 569 aaPredicted RBP11.58□□□□□ -0.56
CCDC58-204ENST00000479414 NUTM2DQ5VT03 806 aaPredicted RBP11.58□□□□□ -0.56
CCDC58-204ENST00000479414 NUTM2AQ8IVF1 878 aaPredicted RBP11.58□□□□□ -0.56
CCDC58-204ENST00000479414 USB1Q9BQ65 265 aaKnown RBP11.58□□□□□ -0.56
CCDC58-204ENST00000479414 KCNC4Q03721 635 aa11.57□□□□□ -0.56
CCDC58-204ENST00000479414 SPSB2Q99619 263 aa11.57□□□□□ -0.56
CCDC58-204ENST00000479414 TLL1O43897 1013 aa11.56□□□□□ -0.56
CCDC58-204ENST00000479414 ADH1BP00325 375 aa11.56□□□□□ -0.56
CCDC58-204ENST00000479414 RFC5P40937 340 aa11.56□□□□□ -0.56
CCDC58-204ENST00000479414 MSS51Q4VC12 460 aa11.55□□□□□ -0.56
CCDC58-204ENST00000479414 FAM160A2Q8N612 972 aaPredicted RBP11.54□□□□□ -0.56
CCDC58-204ENST00000479414 PRR7Q8TB68 274 aa11.54□□□□□ -0.56
CCDC58-204ENST00000479414 CFAP99D6REC4 459 aa11.53□□□□□ -0.56
CCDC58-204ENST00000479414 NKX2-3Q8TAU0 364 aa11.53□□□□□ -0.56
CCDC58-204ENST00000479414 TMEM259Q4ZIN3 620 aa11.52□□□□□ -0.57
CCDC58-204ENST00000479414 IFFO2Q5TF58 517 aa11.52□□□□□ -0.57
CCDC58-204ENST00000479414 DESI1Q6ICB0 168 aa11.52□□□□□ -0.57
CCDC58-204ENST00000479414 MMP16P51512 607 aa11.49□□□□□ -0.57
CCDC58-204ENST00000479414 SLC6A16Q9GZN6 736 aa11.49□□□□□ -0.57
CCDC58-204ENST00000479414 GTF3C3Q9Y5Q9 886 aa11.49□□□□□ -0.57
CCDC58-204ENST00000479414 DXOO77932 396 aaKnown RBP11.48□□□□□ -0.57
CCDC58-204ENST00000479414 JUNDP17535 347 aa11.48□□□□□ -0.57
CCDC58-204ENST00000479414 BANK1Q8NDB2 785 aa11.48□□□□□ -0.57
CCDC58-204ENST00000479414 HELBQ8NG08 1087 aaPredicted RBP11.48□□□□□ -0.57
CCDC58-204ENST00000479414 PLSCR2Q9NRY7 297 aa11.48□□□□□ -0.57
CCDC58-204ENST00000479414 AP1G2O75843 785 aa11.46□□□□□ -0.57
CCDC58-204ENST00000479414 PRDM9Q9NQV7 894 aa11.46□□□□□ -0.57
CCDC58-204ENST00000479414 S1PR4O95977 384 aa11.44□□□□□ -0.58
CCDC58-204ENST00000479414 CTDSPL2Q05D32 466 aa11.44□□□□□ -0.58
CCDC58-204ENST00000479414 LYPD8Q6UX82 237 aa11.44□□□□□ -0.58
CCDC58-204ENST00000479414 TSC1Q92574 1164 aa11.44□□□□□ -0.58
CCDC58-204ENST00000479414 PLA2G2EQ9NZK7 142 aa11.44□□□□□ -0.58
CCDC58-204ENST00000479414 USP17L8P0C7I0 530 aa11.43□□□□□ -0.58
CCDC58-204ENST00000479414 PTPRNQ16849 979 aa11.43□□□□□ -0.58
CCDC58-204ENST00000479414 SOCS7O14512 581 aa11.42□□□□□ -0.58
CCDC58-204ENST00000479414 PER1O15534 1290 aaPredicted RBP11.41□□□□□ -0.58
CCDC58-204ENST00000479414 GGCXP38435 758 aa11.4□□□□□ -0.58
CCDC58-204ENST00000479414 FLIIQ13045 1269 aa11.4□□□□□ -0.58
CCDC58-204ENST00000479414 MCM6Q14566 821 aa11.39□□□□□ -0.59
CCDC58-204ENST00000479414 CCNYL3P0C7X3 344 aa11.38□□□□□ -0.59
CCDC58-204ENST00000479414 PPP1R18Q6NYC8 613 aa11.38□□□□□ -0.59
CCDC58-204ENST00000479414 LRRN4Q8WUT4 740 aa11.38□□□□□ -0.59
CCDC58-204ENST00000479414 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.38□□□□□ -0.59
CCDC58-204ENST00000479414 SNRKQ9NRH2 765 aa11.38□□□□□ -0.59
CCDC58-204ENST00000479414 RNF223E7ERA6 249 aa11.37□□□□□ -0.59
CCDC58-204ENST00000479414 MTMR14Q8NCE2 650 aa11.37□□□□□ -0.59
CCDC58-204ENST00000479414 NUDT12Q9BQG2 462 aa11.37□□□□□ -0.59
CCDC58-204ENST00000479414 F12P00748 615 aaPredicted RBP11.36□□□□□ -0.59
CCDC58-204ENST00000479414 ANKLE1Q8NAG6 615 aa11.36□□□□□ -0.59
CCDC58-204ENST00000479414 EVA1BQ9NVM1 165 aa11.36□□□□□ -0.59
CCDC58-204ENST00000479414 A0A0G2JS52 829 aa11.35□□□□□ -0.59
CCDC58-204ENST00000479414 HMX1Q9NP08 348 aaPredicted RBP11.35□□□□□ -0.59
CCDC58-204ENST00000479414 FCF1Q9Y324 198 aaKnown RBP11.35□□□□□ -0.59
CCDC58-204ENST00000479414 PPEF1O14829 653 aaPredicted RBP11.34□□□□□ -0.59
CCDC58-204ENST00000479414 KCNH2Q12809 1159 aa11.33□□□□□ -0.6
CCDC58-204ENST00000479414 APBB1O00213 710 aa11.32□□□□□ -0.6
CCDC58-204ENST00000479414 GJD4Q96KN9 370 aaPredicted RBP11.32□□□□□ -0.6
CCDC58-204ENST00000479414 TRIM34Q9BYJ4 488 aa11.32□□□□□ -0.6
CCDC58-204ENST00000479414 MAP10Q9P2G4 905 aa11.31□□□□□ -0.6
CCDC58-204ENST00000479414 CCDC24Q8N4L8 307 aa11.3□□□□□ -0.6
CCDC58-204ENST00000479414 CTHP32929 405 aa11.29□□□□□ -0.6
CCDC58-204ENST00000479414 NR6A1Q15406 480 aa11.29□□□□□ -0.6
CCDC58-204ENST00000479414 PTCRAQ6ISU1 281 aaPredicted RBP11.29□□□□□ -0.6
CCDC58-204ENST00000479414 PLA2G2CQ5R387 149 aa11.28□□□□□ -0.6
CCDC58-204ENST00000479414 EPS8L1Q8TE68 723 aa11.28□□□□□ -0.6
CCDC58-204ENST00000479414 TIMELESSQ9UNS1 1208 aa11.28□□□□□ -0.6
CCDC58-204ENST00000479414 UNC93B1Q9H1C4 597 aa11.26□□□□□ -0.61
CCDC58-204ENST00000479414 UBTFP17480 764 aaKnown RBP11.25□□□□□ -0.61
CCDC58-204ENST00000479414 RPIAP49247 311 aa11.25□□□□□ -0.61
CCDC58-204ENST00000479414 NDUFB9Q9Y6M9 179 aa11.25□□□□□ -0.61
CCDC58-204ENST00000479414 PNMA1Q8ND90 353 aa11.24□□□□□ -0.61
CCDC58-204ENST00000479414 ARMC2Q8NEN0 867 aa11.24□□□□□ -0.61
CCDC58-204ENST00000479414 PRM3Q9NNZ6 103 aa11.24□□□□□ -0.61
CCDC58-204ENST00000479414 GPR37L1O60883 481 aa11.23□□□□□ -0.61
CCDC58-204ENST00000479414 EMID1Q96A84 441 aaPredicted RBP11.23□□□□□ -0.61
CCDC58-204ENST00000479414 FKBPLQ9UIM3 349 aa11.23□□□□□ -0.61
CCDC58-204ENST00000479414 COG6Q9Y2V7 657 aa11.23□□□□□ -0.61
CCDC58-204ENST00000479414 ZC3H4Q9UPT8 1303 aaKnown RBP11.23□□□□□ -0.61
CCDC58-204ENST00000479414 ZBTB24O43167 697 aaPredicted RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms