RNA–Protein interactions for RNA: ENST00000479348.2

PCIF1-202, Transcript of PDX1 C-terminal inhibiting factor 1, humanhuman

TSL 1 (best)

Gene PCIF1, Length 1,324 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCIF1-202ENST00000479348 ATF3P18847 181 aa19.89■□□□□ 0.77
PCIF1-202ENST00000479348 PRAM1Q96QH2 718 aa19.89■□□□□ 0.77
PCIF1-202ENST00000479348 PLEKHH1Q9ULM0 1364 aa19.86■□□□□ 0.77
PCIF1-202ENST00000479348 CARD11Q9BXL7 1154 aa19.86■□□□□ 0.77
PCIF1-202ENST00000479348 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.86■□□□□ 0.77
PCIF1-202ENST00000479348 NALCNQ8IZF0 1738 aa19.84■□□□□ 0.77
PCIF1-202ENST00000479348 ARHGEF28Q8N1W1 1705 aaKnown RBP19.84■□□□□ 0.77
PCIF1-202ENST00000479348 EIF3AQ14152 1382 aaKnown RBP19.84■□□□□ 0.77
PCIF1-202ENST00000479348 SLAIN2Q9P270 581 aa19.83■□□□□ 0.77
PCIF1-202ENST00000479348 CDC42BPGQ6DT37 1551 aa19.82■□□□□ 0.76
PCIF1-202ENST00000479348 CENPJQ9HC77 1338 aaPredicted RBP19.82■□□□□ 0.76
PCIF1-202ENST00000479348 SAFB2Q14151 953 aaKnown RBP eCLIP19.81■□□□□ 0.76
PCIF1-202ENST00000479348 PIP4K2BP78356 416 aa19.78■□□□□ 0.76
PCIF1-202ENST00000479348 MINK1Q8N4C8 1332 aaPredicted RBP19.78■□□□□ 0.76
PCIF1-202ENST00000479348 ADGRB2O60241 1585 aa19.78■□□□□ 0.76
PCIF1-202ENST00000479348 MST1RQ04912 1400 aa19.78■□□□□ 0.76
PCIF1-202ENST00000479348 SCAF1Q9H7N4 1312 aaKnown RBP19.76■□□□□ 0.75
PCIF1-202ENST00000479348 WASLO00401 505 aaPredicted RBP19.75■□□□□ 0.75
PCIF1-202ENST00000479348 C1orf167Q5SNV9 1468 aa19.74■□□□□ 0.75
PCIF1-202ENST00000479348 SBNO2Q9Y2G9 1366 aa19.74■□□□□ 0.75
PCIF1-202ENST00000479348 SLC24A1O60721 1099 aa19.74■□□□□ 0.75
PCIF1-202ENST00000479348 HIRIP3Q9BW71 556 aaPredicted RBP19.74■□□□□ 0.75
PCIF1-202ENST00000479348 QRICH2Q9H0J4 1663 aa19.72■□□□□ 0.75
PCIF1-202ENST00000479348 ANKARQ7Z5J8 1434 aa19.72■□□□□ 0.75
PCIF1-202ENST00000479348 FMN2Q9NZ56 1722 aa19.72■□□□□ 0.75
PCIF1-202ENST00000479348 USP47Q96K76 1375 aa19.71■□□□□ 0.75
PCIF1-202ENST00000479348 BRINP3Q76B58 766 aa19.71■□□□□ 0.75
PCIF1-202ENST00000479348 CDK19Q9BWU1 502 aa19.7■□□□□ 0.74
PCIF1-202ENST00000479348 EVC2Q86UK5 1308 aa19.7■□□□□ 0.74
PCIF1-202ENST00000479348 ROBO1Q9Y6N7 1651 aa19.69■□□□□ 0.74
PCIF1-202ENST00000479348 TULP4Q9NRJ4 1543 aa19.68■□□□□ 0.74
PCIF1-202ENST00000479348 ST20-MTHFSA0A0A6YYL1 179 aa19.68■□□□□ 0.74
PCIF1-202ENST00000479348 ESCO1Q5FWF5 840 aa19.68■□□□□ 0.74
PCIF1-202ENST00000479348 NUTM2FA1L443 756 aa19.67■□□□□ 0.74
PCIF1-202ENST00000479348 ORAI2Q96SN7 254 aa19.67■□□□□ 0.74
PCIF1-202ENST00000479348 EIF4G2P78344 907 aaKnown RBP eCLIP19.66■□□□□ 0.74
PCIF1-202ENST00000479348 SRPK2P78362 688 aaKnown RBP19.64■□□□□ 0.73
PCIF1-202ENST00000479348 NUDT16Q96DE0 195 aaKnown RBP19.64■□□□□ 0.73
PCIF1-202ENST00000479348 TESK2Q96S53 571 aa19.64■□□□□ 0.73
PCIF1-202ENST00000479348 PUS7Q96PZ0 661 aaKnown RBP19.63■□□□□ 0.73
PCIF1-202ENST00000479348 PRR36Q9H6K5 1346 aa19.63■□□□□ 0.73
PCIF1-202ENST00000479348 CCDC61Q9Y6R9 512 aa19.63■□□□□ 0.73
PCIF1-202ENST00000479348 AHDC1Q5TGY3 1603 aaPredicted RBP19.62■□□□□ 0.73
PCIF1-202ENST00000479348 ATP7BP35670 1465 aa19.62■□□□□ 0.73
PCIF1-202ENST00000479348 HSPA1LP34931 641 aa19.62■□□□□ 0.73
PCIF1-202ENST00000479348 ZEB1P37275 1124 aaPredicted RBP19.62■□□□□ 0.73
PCIF1-202ENST00000479348 PHF8Q9UPP1 1060 aa19.62■□□□□ 0.73
PCIF1-202ENST00000479348 USP32Q8NFA0 1604 aa19.62■□□□□ 0.73
PCIF1-202ENST00000479348 NPHP3Q7Z494 1330 aa19.61■□□□□ 0.73
PCIF1-202ENST00000479348 KIF1AQ12756 1690 aa19.61■□□□□ 0.73
PCIF1-202ENST00000479348 TMF1P82094 1093 aa19.6■□□□□ 0.73
PCIF1-202ENST00000479348 CABP2Q9NPB3 220 aa19.6■□□□□ 0.73
PCIF1-202ENST00000479348 ATAD2Q6PL18 1390 aa19.59■□□□□ 0.73
PCIF1-202ENST00000479348 NHSL1Q5SYE7 1610 aa19.58■□□□□ 0.73
PCIF1-202ENST00000479348 FOXO3O43524 673 aa19.58■□□□□ 0.73
PCIF1-202ENST00000479348 HSPA5P11021 654 aaKnown RBP19.58■□□□□ 0.73
PCIF1-202ENST00000479348 RGPD8O14715 1765 aaPredicted RBP19.58■□□□□ 0.73
PCIF1-202ENST00000479348 ITSN1Q15811 1721 aa19.58■□□□□ 0.73
PCIF1-202ENST00000479348 PLEKHG3A1L390 1219 aa19.57■□□□□ 0.72
PCIF1-202ENST00000479348 CDCA8Q53HL2 280 aa19.57■□□□□ 0.72
PCIF1-202ENST00000479348 PHLPP1O60346 1717 aa19.57■□□□□ 0.72
PCIF1-202ENST00000479348 SOS2Q07890 1332 aaPredicted RBP19.57■□□□□ 0.72
PCIF1-202ENST00000479348 PMFBP1Q8TBY8 1022 aa19.55■□□□□ 0.72
PCIF1-202ENST00000479348 LRRC59Q96AG4 307 aaKnown RBP19.55■□□□□ 0.72
PCIF1-202ENST00000479348 PSME1Q06323 249 aa19.54■□□□□ 0.72
PCIF1-202ENST00000479348 NGDNQ8NEJ9 315 aaKnown RBP19.54■□□□□ 0.72
PCIF1-202ENST00000479348 DDX17Q92841 729 aaKnown RBP19.54■□□□□ 0.72
PCIF1-202ENST00000479348 TOPAZ1Q8N9V7 1692 aa19.54■□□□□ 0.72
PCIF1-202ENST00000479348 COL16A1Q07092 1604 aaPredicted RBP19.54■□□□□ 0.72
PCIF1-202ENST00000479348 PPIP5K1Q6PFW1 1433 aa19.54■□□□□ 0.72
PCIF1-202ENST00000479348 POLR3AO14802 1390 aaPredicted RBP19.53■□□□□ 0.72
PCIF1-202ENST00000479348 KRT28Q7Z3Y7 464 aa19.52■□□□□ 0.72
PCIF1-202ENST00000479348 CABP1Q9NZU7 370 aa19.52■□□□□ 0.72
PCIF1-202ENST00000479348 PXDNQ92626 1479 aa19.52■□□□□ 0.72
PCIF1-202ENST00000479348 ACEP12821 1306 aa19.52■□□□□ 0.72
PCIF1-202ENST00000479348 DISP3Q9P2K9 1392 aa19.51■□□□□ 0.71
PCIF1-202ENST00000479348 JCADQ9P266 1359 aa19.51■□□□□ 0.71
PCIF1-202ENST00000479348 NINLQ9Y2I6 1382 aa19.51■□□□□ 0.71
PCIF1-202ENST00000479348 ZNF692Q9BU19 519 aaPredicted RBP19.5■□□□□ 0.71
PCIF1-202ENST00000479348 SBNO1A3KN83 1393 aa19.49■□□□□ 0.71
PCIF1-202ENST00000479348 BRD4O60885 1362 aaPredicted RBP19.49■□□□□ 0.71
PCIF1-202ENST00000479348 XPCQ01831 940 aaPredicted RBP19.48■□□□□ 0.71
PCIF1-202ENST00000479348 SPATA31A3Q5VYP0 1347 aa19.46■□□□□ 0.71
PCIF1-202ENST00000479348 TMC1Q8TDI8 760 aa19.46■□□□□ 0.71
PCIF1-202ENST00000479348 TERF2IPQ9NYB0 399 aa19.46■□□□□ 0.71
PCIF1-202ENST00000479348 CPSF1Q10570 1443 aaKnown RBP19.45■□□□□ 0.7
PCIF1-202ENST00000479348 SLC12A5Q9H2X9 1139 aa19.45■□□□□ 0.7
PCIF1-202ENST00000479348 SPATA31A6Q5VVP1 1343 aa19.45■□□□□ 0.7
PCIF1-202ENST00000479348 PNPLA6Q8IY17 1366 aa19.44■□□□□ 0.7
PCIF1-202ENST00000479348 TNS3Q68CZ2 1445 aa19.44■□□□□ 0.7
PCIF1-202ENST00000479348 HDGFL2Q7Z4V5 671 aaPredicted RBP19.44■□□□□ 0.7
PCIF1-202ENST00000479348 ARHGEF10O15013 1369 aa19.43■□□□□ 0.7
PCIF1-202ENST00000479348 SHPRHQ149N8 1683 aa19.43■□□□□ 0.7
PCIF1-202ENST00000479348 USP6P35125 1406 aa19.43■□□□□ 0.7
PCIF1-202ENST00000479348 TRPM3Q9HCF6 1732 aaPredicted RBP19.41■□□□□ 0.7
PCIF1-202ENST00000479348 PAK3O75914 559 aaPredicted RBP19.41■□□□□ 0.7
PCIF1-202ENST00000479348 KTN1Q86UP2 1357 aaKnown RBP19.41■□□□□ 0.7
PCIF1-202ENST00000479348 ANKRD36BQ8N2N9 1353 aa19.39■□□□□ 0.69
PCIF1-202ENST00000479348 SSH2Q76I76 1423 aa19.39■□□□□ 0.69
PCIF1-202ENST00000479348 CD163L1Q9NR16 1453 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms