RNA–Protein interactions for RNA: ENST00000479335.5

RAD51B-208, Transcript of RAD51 paralog B, humanhuman

TSL 1 (best)

Gene RAD51B, Length 1,615 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD51B-208ENST00000479335 NRXN3Q9Y4C0 1643 aa13.27□□□□□ -0.28
RAD51B-208ENST00000479335 PRAM1Q96QH2 718 aa13.27□□□□□ -0.29
RAD51B-208ENST00000479335 CARD14Q9BXL6 1004 aa13.27□□□□□ -0.29
RAD51B-208ENST00000479335 ATAD2Q6PL18 1390 aa13.26□□□□□ -0.29
RAD51B-208ENST00000479335 PPP2R1AP30153 589 aa13.26□□□□□ -0.29
RAD51B-208ENST00000479335 PLEKHG1Q9ULL1 1385 aa13.26□□□□□ -0.29
RAD51B-208ENST00000479335 SLC12A5Q9H2X9 1139 aa13.25□□□□□ -0.29
RAD51B-208ENST00000479335 SLIT1O75093 1534 aa13.25□□□□□ -0.29
RAD51B-208ENST00000479335 ANKRD36BQ8N2N9 1353 aa13.25□□□□□ -0.29
RAD51B-208ENST00000479335 USP32Q8NFA0 1604 aa13.25□□□□□ -0.29
RAD51B-208ENST00000479335 TECPR2O15040 1411 aa13.25□□□□□ -0.29
RAD51B-208ENST00000479335 FAM135BQ49AJ0 1406 aa13.25□□□□□ -0.29
RAD51B-208ENST00000479335 ARHGAP23Q9P227 1491 aa13.25□□□□□ -0.29
RAD51B-208ENST00000479335 CEBPAP49715 358 aaPredicted RBP13.24□□□□□ -0.29
RAD51B-208ENST00000479335 THEMISQ8N1K5 641 aaPredicted RBP13.24□□□□□ -0.29
RAD51B-208ENST00000479335 KNDC1Q76NI1 1749 aa13.24□□□□□ -0.29
RAD51B-208ENST00000479335 EID1Q9Y6B2 187 aa13.24□□□□□ -0.29
RAD51B-208ENST00000479335 NSD2O96028 1365 aa13.23□□□□□ -0.29
RAD51B-208ENST00000479335 CABP2Q9NPB3 220 aa13.22□□□□□ -0.29
RAD51B-208ENST00000479335 METP08581 1390 aa13.22□□□□□ -0.29
RAD51B-208ENST00000479335 SRPK2P78362 688 aaKnown RBP13.21□□□□□ -0.29
RAD51B-208ENST00000479335 NCBP3Q53F19 620 aaKnown RBP13.21□□□□□ -0.29
RAD51B-208ENST00000479335 TXNDC2Q86VQ3 553 aa13.21□□□□□ -0.29
RAD51B-208ENST00000479335 CGNL1Q0VF96 1302 aa13.21□□□□□ -0.29
RAD51B-208ENST00000479335 MINK1Q8N4C8 1332 aaPredicted RBP13.21□□□□□ -0.29
RAD51B-208ENST00000479335 ADAMTS13Q76LX8 1427 aa13.21□□□□□ -0.29
RAD51B-208ENST00000479335 NSD3Q9BZ95 1437 aa13.21□□□□□ -0.29
RAD51B-208ENST00000479335 MED14O60244 1454 aa13.21□□□□□ -0.29
RAD51B-208ENST00000479335 LTKP29376 864 aa13.21□□□□□ -0.3
RAD51B-208ENST00000479335 SAFB2Q14151 953 aaKnown RBP eCLIP13.21□□□□□ -0.3
RAD51B-208ENST00000479335 CDK19Q9BWU1 502 aa13.21□□□□□ -0.3
RAD51B-208ENST00000479335 TERF2IPQ9NYB0 399 aa13.21□□□□□ -0.3
RAD51B-208ENST00000479335 CPS1P31327 1500 aa13.2□□□□□ -0.3
RAD51B-208ENST00000479335 TBX22Q9Y458 520 aa13.2□□□□□ -0.3
RAD51B-208ENST00000479335 ADAMTSL3P82987 1691 aa13.19□□□□□ -0.3
RAD51B-208ENST00000479335 BLMP54132 1417 aaPredicted RBP13.18□□□□□ -0.3
RAD51B-208ENST00000479335 NEFLP07196 543 aa13.18□□□□□ -0.3
RAD51B-208ENST00000479335 PDE3BQ13370 1112 aa13.18□□□□□ -0.3
RAD51B-208ENST00000479335 BCANQ96GW7 911 aa13.18□□□□□ -0.3
RAD51B-208ENST00000479335 WAPLQ7Z5K2 1190 aa13.17□□□□□ -0.3
RAD51B-208ENST00000479335 MORC1Q86VD1 984 aa13.17□□□□□ -0.3
RAD51B-208ENST00000479335 SMG6Q86US8 1419 aaKnown RBP13.17□□□□□ -0.3
RAD51B-208ENST00000479335 SETD1BQ9UPS6 1966 aaKnown RBP13.17□□□□□ -0.3
RAD51B-208ENST00000479335 POLR3AO14802 1390 aaPredicted RBP13.17□□□□□ -0.3
RAD51B-208ENST00000479335 DIP2AQ14689 1571 aa13.17□□□□□ -0.3
RAD51B-208ENST00000479335 WASLO00401 505 aaPredicted RBP13.17□□□□□ -0.3
RAD51B-208ENST00000479335 HDGFL2Q7Z4V5 671 aaPredicted RBP13.17□□□□□ -0.3
RAD51B-208ENST00000479335 SUPT16HQ9Y5B9 1047 aaKnown RBP13.17□□□□□ -0.3
RAD51B-208ENST00000479335 WDR43Q15061 677 aaKnown RBP eCLIP13.16□□□□□ -0.3
RAD51B-208ENST00000479335 RIMS1Q86UR5 1692 aaKnown RBP13.16□□□□□ -0.3
RAD51B-208ENST00000479335 A0A1W2PP64 1363 aa13.15□□□□□ -0.3
RAD51B-208ENST00000479335 PLEKHH1Q9ULM0 1364 aa13.15□□□□□ -0.3
RAD51B-208ENST00000479335 CEP170BQ9Y4F5 1589 aaPredicted RBP13.15□□□□□ -0.3
RAD51B-208ENST00000479335 ATP7BP35670 1465 aa13.14□□□□□ -0.31
RAD51B-208ENST00000479335 ADAMTS8Q9UP79 889 aa13.14□□□□□ -0.31
RAD51B-208ENST00000479335 NUDCQ9Y266 331 aa13.14□□□□□ -0.31
RAD51B-208ENST00000479335 PIK3R4Q99570 1358 aa13.14□□□□□ -0.31
RAD51B-208ENST00000479335 CD163L1Q9NR16 1453 aa13.14□□□□□ -0.31
RAD51B-208ENST00000479335 ERICH6BQ5W0A0 696 aa13.13□□□□□ -0.31
RAD51B-208ENST00000479335 NGEFQ8N5V2 710 aa13.13□□□□□ -0.31
RAD51B-208ENST00000479335 CABP1Q9NZU7 370 aa13.13□□□□□ -0.31
RAD51B-208ENST00000479335 ADGRB2O60241 1585 aa13.12□□□□□ -0.31
RAD51B-208ENST00000479335 ZNF142P52746 1687 aaPredicted RBP13.12□□□□□ -0.31
RAD51B-208ENST00000479335 FKBP8Q14318 412 aa13.11□□□□□ -0.31
RAD51B-208ENST00000479335 CCDC61Q9Y6R9 512 aa13.11□□□□□ -0.31
RAD51B-208ENST00000479335 ROBO2Q9HCK4 1378 aa13.11□□□□□ -0.31
RAD51B-208ENST00000479335 PTCH1Q13635 1447 aa13.11□□□□□ -0.31
RAD51B-208ENST00000479335 NPM3O75607 178 aaKnown RBP13.1□□□□□ -0.31
RAD51B-208ENST00000479335 CFAP53Q96M91 514 aa13.1□□□□□ -0.31
RAD51B-208ENST00000479335 ANKRD26Q9UPS8 1709 aa13.1□□□□□ -0.31
RAD51B-208ENST00000479335 CPSF1Q10570 1443 aaKnown RBP13.1□□□□□ -0.31
RAD51B-208ENST00000479335 PTPRUQ92729 1446 aa13.1□□□□□ -0.31
RAD51B-208ENST00000479335 FYB1O15117 783 aa13.1□□□□□ -0.31
RAD51B-208ENST00000479335 ANKLE2Q86XL3 938 aa13.1□□□□□ -0.31
RAD51B-208ENST00000479335 NUDT16Q96DE0 195 aaKnown RBP13.1□□□□□ -0.31
RAD51B-208ENST00000479335 SLC26A8Q96RN1 970 aa13.1□□□□□ -0.31
RAD51B-208ENST00000479335 ZNF692Q9BU19 519 aaPredicted RBP13.1□□□□□ -0.31
RAD51B-208ENST00000479335 AMOTL2Q9Y2J4 779 aa13.1□□□□□ -0.31
RAD51B-208ENST00000479335 PPIP5K1Q6PFW1 1433 aa13.08□□□□□ -0.32
RAD51B-208ENST00000479335 MTHFSP49914 203 aa13.07□□□□□ -0.32
RAD51B-208ENST00000479335 EDC4Q6P2E9 1401 aaKnown RBP13.07□□□□□ -0.32
RAD51B-208ENST00000479335 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.07□□□□□ -0.32
RAD51B-208ENST00000479335 RNF123Q5XPI4 1314 aa13.07□□□□□ -0.32
RAD51B-208ENST00000479335 XRN1Q8IZH2 1706 aaKnown RBP13.06□□□□□ -0.32
RAD51B-208ENST00000479335 CDC42BPGQ6DT37 1551 aa13.06□□□□□ -0.32
RAD51B-208ENST00000479335 KIF20BQ96Q89 1820 aa13.06□□□□□ -0.32
RAD51B-208ENST00000479335 PLEKHG3A1L390 1219 aa13.06□□□□□ -0.32
RAD51B-208ENST00000479335 GGNBP2Q9H3C7 697 aa13.05□□□□□ -0.32
RAD51B-208ENST00000479335 SHPRHQ149N8 1683 aa13.04□□□□□ -0.32
RAD51B-208ENST00000479335 AKAP12Q02952 1782 aa13.04□□□□□ -0.32
RAD51B-208ENST00000479335 TNNT2P45379 298 aaPredicted RBP13.03□□□□□ -0.32
RAD51B-208ENST00000479335 PELP1Q8IZL8 1130 aaKnown RBP13.03□□□□□ -0.32
RAD51B-208ENST00000479335 ZNF521Q96K83 1311 aa13.03□□□□□ -0.32
RAD51B-208ENST00000479335 MON2Q7Z3U7 1717 aa13.03□□□□□ -0.32
RAD51B-208ENST00000479335 PRR36Q9H6K5 1346 aa13.02□□□□□ -0.32
RAD51B-208ENST00000479335 TOPAZ1Q8N9V7 1692 aa13.02□□□□□ -0.33
RAD51B-208ENST00000479335 RUNDC1Q96C34 613 aa13.02□□□□□ -0.33
RAD51B-208ENST00000479335 PNPLA6Q8IY17 1366 aa13.02□□□□□ -0.33
RAD51B-208ENST00000479335 ITSN1Q15811 1721 aa13.01□□□□□ -0.33
RAD51B-208ENST00000479335 CHD2O14647 1828 aaKnown RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms