RNA–Protein interactions for RNA: ENST00000479309.6

SPC25-204, Transcript of SPC25, NDC80 kinetochore complex component, humanhuman

TSL 5

Gene SPC25, Length 510 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC25-204ENST00000479309 SPIRE2Q8WWL2 714 aa8.47□□□□□ -1.05
SPC25-204ENST00000479309 USB1Q9BQ65 265 aaKnown RBP8.47□□□□□ -1.05
SPC25-204ENST00000479309 NRG2O14511 850 aaPredicted RBP8.46□□□□□ -1.06
SPC25-204ENST00000479309 RPIAP49247 311 aa8.46□□□□□ -1.06
SPC25-204ENST00000479309 HLA-CQ95604 372 aa8.46□□□□□ -1.06
SPC25-204ENST00000479309 GJA5P36382 358 aa8.45□□□□□ -1.06
SPC25-204ENST00000479309 PRR20EP86478 221 aa8.45□□□□□ -1.06
SPC25-204ENST00000479309 PRR20CP86479 221 aa8.45□□□□□ -1.06
SPC25-204ENST00000479309 PRR20DP86480 221 aa8.45□□□□□ -1.06
SPC25-204ENST00000479309 PRR20BP86481 221 aa8.45□□□□□ -1.06
SPC25-204ENST00000479309 PRR20AP86496 221 aa8.45□□□□□ -1.06
SPC25-204ENST00000479309 DIXDC1Q155Q3 683 aa8.45□□□□□ -1.06
SPC25-204ENST00000479309 TRIM67Q6ZTA4 783 aa8.45□□□□□ -1.06
SPC25-204ENST00000479309 DXOO77932 396 aaKnown RBP8.44□□□□□ -1.06
SPC25-204ENST00000479309 PDE4DQ08499 809 aa8.44□□□□□ -1.06
SPC25-204ENST00000479309 SLC24A3Q9HC58 644 aa8.44□□□□□ -1.06
SPC25-204ENST00000479309 PRDM9Q9NQV7 894 aa8.44□□□□□ -1.06
SPC25-204ENST00000479309 FCF1Q9Y324 198 aaKnown RBP8.44□□□□□ -1.06
SPC25-204ENST00000479309 FDX1P10109 184 aa8.43□□□□□ -1.06
SPC25-204ENST00000479309 MS4A1P11836 297 aa8.43□□□□□ -1.06
SPC25-204ENST00000479309 BEGAINQ9BUH8 593 aa8.43□□□□□ -1.06
SPC25-204ENST00000479309 PCDHGC3Q9UN70 934 aa8.43□□□□□ -1.06
SPC25-204ENST00000479309 GUCA2AQ02747 115 aa8.42□□□□□ -1.06
SPC25-204ENST00000479309 RETREG3Q86VR2 466 aa8.42□□□□□ -1.06
SPC25-204ENST00000479309 PDZRN3Q9UPQ7 1066 aa8.42□□□□□ -1.06
SPC25-204ENST00000479309 MOXD2PA6NHM9 499 aa8.41□□□□□ -1.06
SPC25-204ENST00000479309 GDF9O60383 454 aa8.41□□□□□ -1.06
SPC25-204ENST00000479309 ZNF697Q5TEC3 545 aa8.41□□□□□ -1.06
SPC25-204ENST00000479309 CD2BP2O95400 341 aaKnown RBP8.4□□□□□ -1.06
SPC25-204ENST00000479309 TBC1D2Q9BYX2 928 aa8.39□□□□□ -1.07
SPC25-204ENST00000479309 LOC100996750A0A140TA64 210 aa8.38□□□□□ -1.07
SPC25-204ENST00000479309 SPDYE5A6NIY4 337 aa8.38□□□□□ -1.07
SPC25-204ENST00000479309 JUNDP17535 347 aa8.38□□□□□ -1.07
SPC25-204ENST00000479309 NDUFV2P19404 249 aa8.38□□□□□ -1.07
SPC25-204ENST00000479309 SYMPKQ92797 1274 aaKnown RBP8.38□□□□□ -1.07
SPC25-204ENST00000479309 KRTAP4-6Q9BYQ5 205 aa8.38□□□□□ -1.07
SPC25-204ENST00000479309 SPTLC1O15269 473 aa8.37□□□□□ -1.07
SPC25-204ENST00000479309 RSBN1LQ6PCB5 846 aaPredicted RBP8.37□□□□□ -1.07
SPC25-204ENST00000479309 PKD2L1Q9P0L9 805 aa8.37□□□□□ -1.07
SPC25-204ENST00000479309 ZBTB24O43167 697 aaPredicted RBP8.36□□□□□ -1.07
SPC25-204ENST00000479309 TUSC1Q2TAM9 212 aa8.36□□□□□ -1.07
SPC25-204ENST00000479309 DESI1Q6ICB0 168 aa8.36□□□□□ -1.07
SPC25-204ENST00000479309 C6orf229H3BNL8 230 aa8.35□□□□□ -1.07
SPC25-204ENST00000479309 MTMR2Q13614 643 aa8.35□□□□□ -1.07
SPC25-204ENST00000479309 PRPF38BQ5VTL8 546 aaKnown RBP8.34□□□□□ -1.07
SPC25-204ENST00000479309 DGAT1O75907 488 aa8.33□□□□□ -1.08
SPC25-204ENST00000479309 TRIM32Q13049 653 aa8.33□□□□□ -1.08
SPC25-204ENST00000479309 RIC3Q7Z5B4 369 aa8.33□□□□□ -1.08
SPC25-204ENST00000479309 PTPRNQ16849 979 aa8.32□□□□□ -1.08
SPC25-204ENST00000479309 MYSM1Q5VVJ2 828 aa8.32□□□□□ -1.08
SPC25-204ENST00000479309 PCDHB15Q9Y5E8 787 aa8.32□□□□□ -1.08
SPC25-204ENST00000479309 WNT7AO00755 349 aa8.31□□□□□ -1.08
SPC25-204ENST00000479309 PRR7Q8TB68 274 aa8.31□□□□□ -1.08
SPC25-204ENST00000479309 NUDT12Q9BQG2 462 aa8.31□□□□□ -1.08
SPC25-204ENST00000479309 TOR4AQ9NXH8 423 aa8.31□□□□□ -1.08
SPC25-204ENST00000479309 TNFRSF10AO00220 468 aa8.3□□□□□ -1.08
SPC25-204ENST00000479309 HRCP23327 699 aa8.3□□□□□ -1.08
SPC25-204ENST00000479309 WNT7BP56706 349 aa8.3□□□□□ -1.08
SPC25-204ENST00000479309 RSPH6AQ9H0K4 717 aa8.3□□□□□ -1.08
SPC25-204ENST00000479309 ZBTB3Q9H5J0 574 aa8.3□□□□□ -1.08
SPC25-204ENST00000479309 EVA1BQ9NVM1 165 aa8.3□□□□□ -1.08
SPC25-204ENST00000479309 CCNYL3P0C7X3 344 aa8.29□□□□□ -1.08
SPC25-204ENST00000479309 CCDC24Q8N4L8 307 aa8.29□□□□□ -1.08
SPC25-204ENST00000479309 FOXC1Q12948 553 aa8.28□□□□□ -1.08
SPC25-204ENST00000479309 LIMD1Q9UGP4 676 aa8.28□□□□□ -1.08
SPC25-204ENST00000479309 LILRB3O75022 631 aa8.27□□□□□ -1.09
SPC25-204ENST00000479309 PKDCCQ504Y2 493 aa8.27□□□□□ -1.09
SPC25-204ENST00000479309 PTCRAQ6ISU1 281 aaPredicted RBP8.27□□□□□ -1.09
SPC25-204ENST00000479309 LYPD8Q6UX82 237 aa8.27□□□□□ -1.09
SPC25-204ENST00000479309 CFAP99D6REC4 459 aa8.26□□□□□ -1.09
SPC25-204ENST00000479309 AVPP01185 164 aa8.26□□□□□ -1.09
SPC25-204ENST00000479309 SKOR1P84550 965 aa8.26□□□□□ -1.09
SPC25-204ENST00000479309 MYT1Q01538 1121 aa8.26□□□□□ -1.09
SPC25-204ENST00000479309 KCNH2Q12809 1159 aa8.26□□□□□ -1.09
SPC25-204ENST00000479309 LCE2AQ5TA79 106 aaPredicted RBP8.26□□□□□ -1.09
SPC25-204ENST00000479309 KDM4CQ9H3R0 1056 aa8.26□□□□□ -1.09
SPC25-204ENST00000479309 CLK2P49760 499 aaKnown RBP8.25□□□□□ -1.09
SPC25-204ENST00000479309 CYP4X1Q8N118 509 aa8.25□□□□□ -1.09
SPC25-204ENST00000479309 CRIPAKQ8N1N5 446 aa8.25□□□□□ -1.09
SPC25-204ENST00000479309 DDRGK1Q96HY6 314 aa8.25□□□□□ -1.09
SPC25-204ENST00000479309 FAM187AA6NFU0 413 aa8.24□□□□□ -1.09
SPC25-204ENST00000479309 RC3H1Q5TC82 1133 aaKnown RBP8.24□□□□□ -1.09
SPC25-204ENST00000479309 SNIP1Q8TAD8 396 aaKnown RBP8.24□□□□□ -1.09
SPC25-204ENST00000479309 CABLES1Q8TDN4 633 aa8.24□□□□□ -1.09
SPC25-204ENST00000479309 MRGPRX2Q96LB1 330 aa8.24□□□□□ -1.09
SPC25-204ENST00000479309 F12P00748 615 aaPredicted RBP8.23□□□□□ -1.09
SPC25-204ENST00000479309 SKIV2LQ15477 1246 aaKnown RBP8.23□□□□□ -1.09
SPC25-204ENST00000479309 GPBP1L1Q9HC44 474 aaPredicted RBP8.23□□□□□ -1.09
SPC25-204ENST00000479309 QPCTQ16769 361 aa8.22□□□□□ -1.09
SPC25-204ENST00000479309 SH3D19Q5HYK7 790 aa8.22□□□□□ -1.09
SPC25-204ENST00000479309 FAM117AQ9C073 453 aa8.22□□□□□ -1.09
SPC25-204ENST00000479309 UNC93B1Q9H1C4 597 aa8.22□□□□□ -1.09
SPC25-204ENST00000479309 POTECB2RU33 542 aa8.21□□□□□ -1.1
SPC25-204ENST00000479309 SIAH2O43255 324 aa8.21□□□□□ -1.1
SPC25-204ENST00000479309 SMCPP49901 116 aaPredicted RBP8.21□□□□□ -1.1
SPC25-204ENST00000479309 PLEKHG3A1L390 1219 aa8.2□□□□□ -1.1
SPC25-204ENST00000479309 SMPD1P17405 629 aa8.2□□□□□ -1.1
SPC25-204ENST00000479309 SH3BP2P78314 561 aa8.2□□□□□ -1.1
SPC25-204ENST00000479309 CTC1Q2NKJ3 1217 aa8.2□□□□□ -1.1
SPC25-204ENST00000479309 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms