RNA–Protein interactions for RNA: ENST00000479219.5

USP30-206, Transcript of ubiquitin specific peptidase 30, humanhuman

TSL 1 (best)

Gene USP30, Length 2,906 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-206ENST00000479219 EVC2Q86UK5 1308 aa11.09□□□□□ -0.63
USP30-206ENST00000479219 SHPRHQ149N8 1683 aa11.09□□□□□ -0.63
USP30-206ENST00000479219 CARD14Q9BXL6 1004 aa11.08□□□□□ -0.63
USP30-206ENST00000479219 SLFN5Q08AF3 891 aa11.08□□□□□ -0.64
USP30-206ENST00000479219 IPO9Q96P70 1041 aaKnown RBP11.08□□□□□ -0.64
USP30-206ENST00000479219 E9PSI1 815 aa11.08□□□□□ -0.64
USP30-206ENST00000479219 TRMT2AQ8IZ69 625 aaKnown RBP11.08□□□□□ -0.64
USP30-206ENST00000479219 TMEM131LA2VDJ0 1609 aa11.07□□□□□ -0.64
USP30-206ENST00000479219 CGNL1Q0VF96 1302 aa11.07□□□□□ -0.64
USP30-206ENST00000479219 NCBP3Q53F19 620 aaKnown RBP11.07□□□□□ -0.64
USP30-206ENST00000479219 TRAK1Q9UPV9 953 aa11.07□□□□□ -0.64
USP30-206ENST00000479219 ANKRD36BQ8N2N9 1353 aa11.07□□□□□ -0.64
USP30-206ENST00000479219 CLTCQ00610 1675 aaKnown RBP11.06□□□□□ -0.64
USP30-206ENST00000479219 MYO5BQ9ULV0 1848 aa11.06□□□□□ -0.64
USP30-206ENST00000479219 TULP4Q9NRJ4 1543 aa11.06□□□□□ -0.64
USP30-206ENST00000479219 RAPGEF3O95398 923 aa11.05□□□□□ -0.64
USP30-206ENST00000479219 MORC1Q86VD1 984 aa11.05□□□□□ -0.64
USP30-206ENST00000479219 ANKRD26Q9UPS8 1709 aa11.05□□□□□ -0.64
USP30-206ENST00000479219 CFAP53Q96M91 514 aa11.05□□□□□ -0.64
USP30-206ENST00000479219 PPP6R1Q9UPN7 881 aa11.05□□□□□ -0.64
USP30-206ENST00000479219 AGLP35573 1532 aa11.05□□□□□ -0.64
USP30-206ENST00000479219 CRBNQ96SW2 442 aa11.05□□□□□ -0.64
USP30-206ENST00000479219 ZBTB47Q9UFB7 747 aaPredicted RBP11.05□□□□□ -0.64
USP30-206ENST00000479219 CENPQQ7L2Z9 268 aaPredicted RBP11.04□□□□□ -0.64
USP30-206ENST00000479219 APAF1O14727 1248 aa11.03□□□□□ -0.64
USP30-206ENST00000479219 IQSEC2Q5JU85 1478 aa11.03□□□□□ -0.64
USP30-206ENST00000479219 DIP2BQ9P265 1576 aa11.03□□□□□ -0.64
USP30-206ENST00000479219 YEATS2Q9ULM3 1422 aa11.03□□□□□ -0.64
USP30-206ENST00000479219 PLIN1O60240 522 aa11.02□□□□□ -0.64
USP30-206ENST00000479219 ATAD2Q6PL18 1390 aa11.02□□□□□ -0.64
USP30-206ENST00000479219 RUNDC1Q96C34 613 aa11.02□□□□□ -0.65
USP30-206ENST00000479219 MED14O60244 1454 aa11.02□□□□□ -0.65
USP30-206ENST00000479219 CCDC146Q8IYE0 955 aa11.02□□□□□ -0.65
USP30-206ENST00000479219 IDI1Q13907 227 aa11.01□□□□□ -0.65
USP30-206ENST00000479219 TMEM132EQ6IEE7 984 aa11.01□□□□□ -0.65
USP30-206ENST00000479219 SLC12A5Q9H2X9 1139 aa11.01□□□□□ -0.65
USP30-206ENST00000479219 AAMPQ13685 434 aa11.01□□□□□ -0.65
USP30-206ENST00000479219 KDM2BQ8NHM5 1336 aa11.01□□□□□ -0.65
USP30-206ENST00000479219 PTPRMP28827 1452 aa11□□□□□ -0.65
USP30-206ENST00000479219 ABCC11Q96J66 1382 aa11□□□□□ -0.65
USP30-206ENST00000479219 CCDC27Q2M243 656 aa11□□□□□ -0.65
USP30-206ENST00000479219 BACH2Q9BYV9 841 aa11□□□□□ -0.65
USP30-206ENST00000479219 PDE4AP27815 886 aa11□□□□□ -0.65
USP30-206ENST00000479219 CYB5RLQ6IPT4 315 aa11□□□□□ -0.65
USP30-206ENST00000479219 PDE3AQ14432 1141 aa10.99□□□□□ -0.65
USP30-206ENST00000479219 ADGRB2O60241 1585 aa10.99□□□□□ -0.65
USP30-206ENST00000479219 DLC1Q96QB1 1528 aa10.99□□□□□ -0.65
USP30-206ENST00000479219 WDR63Q8IWG1 891 aa10.99□□□□□ -0.65
USP30-206ENST00000479219 WWC1Q8IX03 1113 aa10.98□□□□□ -0.65
USP30-206ENST00000479219 YTHDC2Q9H6S0 1430 aaKnown RBP10.98□□□□□ -0.65
USP30-206ENST00000479219 ALKQ9UM73 1620 aa10.98□□□□□ -0.65
USP30-206ENST00000479219 TERF2IPQ9NYB0 399 aa10.98□□□□□ -0.65
USP30-206ENST00000479219 KIF20BQ96Q89 1820 aa10.98□□□□□ -0.65
USP30-206ENST00000479219 SPATA31D1Q6ZQQ2 1576 aa10.98□□□□□ -0.65
USP30-206ENST00000479219 C20orf194Q5TEA3 1177 aa10.97□□□□□ -0.65
USP30-206ENST00000479219 PHF23Q9BUL5 403 aaPredicted RBP10.97□□□□□ -0.65
USP30-206ENST00000479219 USP35Q9P2H5 1018 aa10.97□□□□□ -0.65
USP30-206ENST00000479219 MTHFSP49914 203 aa10.96□□□□□ -0.66
USP30-206ENST00000479219 DDRGK1Q96HY6 314 aa10.96□□□□□ -0.66
USP30-206ENST00000479219 ANO8Q9HCE9 1232 aaPredicted RBP10.96□□□□□ -0.66
USP30-206ENST00000479219 A0A1W2PP64 1363 aa10.96□□□□□ -0.66
USP30-206ENST00000479219 VIRMAQ69YN4 1812 aaKnown RBP10.96□□□□□ -0.66
USP30-206ENST00000479219 CT47B1P0C2W7 299 aaPredicted RBP10.95□□□□□ -0.66
USP30-206ENST00000479219 MYH16Q9H6N6 1097 aa10.95□□□□□ -0.66
USP30-206ENST00000479219 TSPOAP1O95153 1857 aa10.95□□□□□ -0.66
USP30-206ENST00000479219 SRPK2P78362 688 aaKnown RBP10.95□□□□□ -0.66
USP30-206ENST00000479219 TCP11L2Q8N4U5 519 aa10.95□□□□□ -0.66
USP30-206ENST00000479219 UBE2Q2Q8WVN8 375 aa10.95□□□□□ -0.66
USP30-206ENST00000479219 KIF13AQ9H1H9 1805 aa10.94□□□□□ -0.66
USP30-206ENST00000479219 SETD1AO15047 1707 aaKnown RBP10.94□□□□□ -0.66
USP30-206ENST00000479219 PNNQ9H307 717 aaKnown RBP10.94□□□□□ -0.66
USP30-206ENST00000479219 SPINK5Q9NQ38 1064 aaPredicted RBP10.94□□□□□ -0.66
USP30-206ENST00000479219 ARHGEF40Q8TER5 1519 aa10.94□□□□□ -0.66
USP30-206ENST00000479219 POGKQ9P215 609 aa10.94□□□□□ -0.66
USP30-206ENST00000479219 ATP7BP35670 1465 aa10.93□□□□□ -0.66
USP30-206ENST00000479219 CANXP27824 592 aaKnown RBP10.93□□□□□ -0.66
USP30-206ENST00000479219 HDGFL2Q7Z4V5 671 aaPredicted RBP10.93□□□□□ -0.66
USP30-206ENST00000479219 CABP2Q9NPB3 220 aa10.93□□□□□ -0.66
USP30-206ENST00000479219 FAM69CQ0P6D2 419 aa10.93□□□□□ -0.66
USP30-206ENST00000479219 STAG3Q9UJ98 1225 aa10.93□□□□□ -0.66
USP30-206ENST00000479219 CDC42BPGQ6DT37 1551 aa10.92□□□□□ -0.66
USP30-206ENST00000479219 TNNT2P45379 298 aaPredicted RBP10.92□□□□□ -0.66
USP30-206ENST00000479219 NUTM2DQ5VT03 806 aaPredicted RBP10.92□□□□□ -0.66
USP30-206ENST00000479219 A2ML1A8K2U0 1454 aa10.92□□□□□ -0.66
USP30-206ENST00000479219 COL3A1P02461 1466 aaPredicted RBP10.92□□□□□ -0.66
USP30-206ENST00000479219 KNDC1Q76NI1 1749 aa10.92□□□□□ -0.66
USP30-206ENST00000479219 NLRP1Q9C000 1473 aa10.92□□□□□ -0.66
USP30-206ENST00000479219 CD163L1Q9NR16 1453 aa10.92□□□□□ -0.66
USP30-206ENST00000479219 FAM161AQ3B820 660 aa10.91□□□□□ -0.66
USP30-206ENST00000479219 IL27Q8NEV9 243 aa10.91□□□□□ -0.66
USP30-206ENST00000479219 PRAM1Q96QH2 718 aa10.91□□□□□ -0.66
USP30-206ENST00000479219 ZMYM3Q14202 1370 aa10.91□□□□□ -0.66
USP30-206ENST00000479219 BCAR3O75815 825 aa10.91□□□□□ -0.66
USP30-206ENST00000479219 PPM1GO15355 546 aaPredicted RBP10.91□□□□□ -0.66
USP30-206ENST00000479219 U2AF1L5P0DN76 240 aaPredicted RBP10.91□□□□□ -0.66
USP30-206ENST00000479219 U2AF1Q01081 240 aaKnown RBP eCLIP10.91□□□□□ -0.66
USP30-206ENST00000479219 STK26Q9P289 416 aa10.91□□□□□ -0.66
USP30-206ENST00000479219 MAPK8IP3Q9UPT6 1336 aa10.91□□□□□ -0.66
USP30-206ENST00000479219 NEFMP07197 916 aa10.9□□□□□ -0.66
USP30-206ENST00000479219 RARSP54136 660 aaKnown RBP10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms