RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 HSPA1LP34931 641 aa22.25■■□□□ 1.15
C9orf3-217ENST00000479161 WAPLQ7Z5K2 1190 aa22.25■■□□□ 1.15
C9orf3-217ENST00000479161 TIMELESSQ9UNS1 1208 aa22.24■■□□□ 1.15
C9orf3-217ENST00000479161 TONSLQ96HA7 1378 aa22.23■■□□□ 1.15
C9orf3-217ENST00000479161 PLEKHH1Q9ULM0 1364 aa22.22■■□□□ 1.15
C9orf3-217ENST00000479161 TRPM1Q7Z4N2 1603 aa22.21■■□□□ 1.15
C9orf3-217ENST00000479161 PRAM1Q96QH2 718 aa22.21■■□□□ 1.15
C9orf3-217ENST00000479161 C1orf167Q5SNV9 1468 aa22.21■■□□□ 1.15
C9orf3-217ENST00000479161 ADGRB2O60241 1585 aa22.21■■□□□ 1.15
C9orf3-217ENST00000479161 AHDC1Q5TGY3 1603 aaPredicted RBP22.2■■□□□ 1.15
C9orf3-217ENST00000479161 ARHGEF28Q8N1W1 1705 aaKnown RBP22.2■■□□□ 1.14
C9orf3-217ENST00000479161 TRAK1Q9UPV9 953 aa22.2■■□□□ 1.14
C9orf3-217ENST00000479161 BRINP3Q76B58 766 aa22.19■■□□□ 1.14
C9orf3-217ENST00000479161 POGKQ9P215 609 aa22.19■■□□□ 1.14
C9orf3-217ENST00000479161 NBPF1Q3BBV0 1214 aa22.18■■□□□ 1.14
C9orf3-217ENST00000479161 FMN2Q9NZ56 1722 aa22.17■■□□□ 1.14
C9orf3-217ENST00000479161 GPRASP1Q5JY77 1395 aa22.17■■□□□ 1.14
C9orf3-217ENST00000479161 MED1Q15648 1581 aaPredicted RBP22.16■■□□□ 1.14
C9orf3-217ENST00000479161 NHSL1Q5SYE7 1610 aa22.15■■□□□ 1.14
C9orf3-217ENST00000479161 PHLPP1O60346 1717 aa22.14■■□□□ 1.14
C9orf3-217ENST00000479161 NBPF8Q3BBV2 869 aa22.13■■□□□ 1.13
C9orf3-217ENST00000479161 COL16A1Q07092 1604 aaPredicted RBP22.13■■□□□ 1.13
C9orf3-217ENST00000479161 EIF3AQ14152 1382 aaKnown RBP22.12■■□□□ 1.13
C9orf3-217ENST00000479161 ANKARQ7Z5J8 1434 aa22.12■■□□□ 1.13
C9orf3-217ENST00000479161 ROCK2O75116 1388 aaKnown RBP22.11■■□□□ 1.13
C9orf3-217ENST00000479161 RALGAPBQ86X10 1494 aa22.1■■□□□ 1.13
C9orf3-217ENST00000479161 WASLO00401 505 aaPredicted RBP22.08■■□□□ 1.13
C9orf3-217ENST00000479161 ORAI2Q96SN7 254 aa22.08■■□□□ 1.13
C9orf3-217ENST00000479161 KIF1AQ12756 1690 aa22.07■■□□□ 1.12
C9orf3-217ENST00000479161 SAFB2Q14151 953 aaKnown RBP eCLIP22.07■■□□□ 1.12
C9orf3-217ENST00000479161 JCADQ9P266 1359 aa22.07■■□□□ 1.12
C9orf3-217ENST00000479161 CENPJQ9HC77 1338 aaPredicted RBP22.06■■□□□ 1.12
C9orf3-217ENST00000479161 CCER1Q8TC90 406 aaPredicted RBP22.06■■□□□ 1.12
C9orf3-217ENST00000479161 SOS2Q07890 1332 aaPredicted RBP22.06■■□□□ 1.12
C9orf3-217ENST00000479161 RGPD8O14715 1765 aaPredicted RBP22.05■■□□□ 1.12
C9orf3-217ENST00000479161 ESCO1Q5FWF5 840 aa22.05■■□□□ 1.12
C9orf3-217ENST00000479161 LRRC59Q96AG4 307 aaKnown RBP22.05■■□□□ 1.12
C9orf3-217ENST00000479161 TULP4Q9NRJ4 1543 aa22.05■■□□□ 1.12
C9orf3-217ENST00000479161 NPHP3Q7Z494 1330 aa22.05■■□□□ 1.12
C9orf3-217ENST00000479161 MINK1Q8N4C8 1332 aaPredicted RBP22.05■■□□□ 1.12
C9orf3-217ENST00000479161 SHPRHQ149N8 1683 aa22.04■■□□□ 1.12
C9orf3-217ENST00000479161 USP32Q8NFA0 1604 aa22.03■■□□□ 1.12
C9orf3-217ENST00000479161 SBNO2Q9Y2G9 1366 aa22.02■■□□□ 1.12
C9orf3-217ENST00000479161 QRICH2Q9H0J4 1663 aa22.01■■□□□ 1.11
C9orf3-217ENST00000479161 CARD11Q9BXL7 1154 aa22.01■■□□□ 1.11
C9orf3-217ENST00000479161 SPATA31A6Q5VVP1 1343 aa22.01■■□□□ 1.11
C9orf3-217ENST00000479161 HIRIP3Q9BW71 556 aaPredicted RBP22■■□□□ 1.11
C9orf3-217ENST00000479161 ITSN1Q15811 1721 aa22■■□□□ 1.11
C9orf3-217ENST00000479161 PHF8Q9UPP1 1060 aa21.99■■□□□ 1.11
C9orf3-217ENST00000479161 PXDNQ92626 1479 aa21.98■■□□□ 1.11
C9orf3-217ENST00000479161 SLC24A1O60721 1099 aa21.98■■□□□ 1.11
C9orf3-217ENST00000479161 CDK19Q9BWU1 502 aa21.98■■□□□ 1.11
C9orf3-217ENST00000479161 NUTM2FA1L443 756 aa21.97■■□□□ 1.11
C9orf3-217ENST00000479161 FOXO3O43524 673 aa21.97■■□□□ 1.11
C9orf3-217ENST00000479161 ATP7BP35670 1465 aa21.96■■□□□ 1.11
C9orf3-217ENST00000479161 PRR36Q9H6K5 1346 aa21.96■■□□□ 1.11
C9orf3-217ENST00000479161 NUDT16Q96DE0 195 aaKnown RBP21.95■■□□□ 1.1
C9orf3-217ENST00000479161 CCDC61Q9Y6R9 512 aa21.95■■□□□ 1.1
C9orf3-217ENST00000479161 DDX17Q92841 729 aaKnown RBP21.94■■□□□ 1.1
C9orf3-217ENST00000479161 PSME1Q06323 249 aa21.93■■□□□ 1.1
C9orf3-217ENST00000479161 EVC2Q86UK5 1308 aa21.93■■□□□ 1.1
C9orf3-217ENST00000479161 TOPAZ1Q8N9V7 1692 aa21.93■■□□□ 1.1
C9orf3-217ENST00000479161 COL22A1Q8NFW1 1626 aaPredicted RBP21.92■■□□□ 1.1
C9orf3-217ENST00000479161 SBNO1A3KN83 1393 aa21.92■■□□□ 1.1
C9orf3-217ENST00000479161 PNPLA6Q8IY17 1366 aa21.92■■□□□ 1.1
C9orf3-217ENST00000479161 PLEKHG3A1L390 1219 aa21.92■■□□□ 1.1
C9orf3-217ENST00000479161 PUS7Q96PZ0 661 aaKnown RBP21.91■■□□□ 1.1
C9orf3-217ENST00000479161 KRT28Q7Z3Y7 464 aa21.9■■□□□ 1.1
C9orf3-217ENST00000479161 POLR3AO14802 1390 aaPredicted RBP21.89■■□□□ 1.1
C9orf3-217ENST00000479161 SPATA31A3Q5VYP0 1347 aa21.89■■□□□ 1.1
C9orf3-217ENST00000479161 SRPK2P78362 688 aaKnown RBP21.87■■□□□ 1.09
C9orf3-217ENST00000479161 BRD4O60885 1362 aaPredicted RBP21.87■■□□□ 1.09
C9orf3-217ENST00000479161 PMFBP1Q8TBY8 1022 aa21.86■■□□□ 1.09
C9orf3-217ENST00000479161 TRPM3Q9HCF6 1732 aaPredicted RBP21.85■■□□□ 1.09
C9orf3-217ENST00000479161 ATAD2Q6PL18 1390 aa21.85■■□□□ 1.09
C9orf3-217ENST00000479161 TNS3Q68CZ2 1445 aa21.84■■□□□ 1.09
C9orf3-217ENST00000479161 NGDNQ8NEJ9 315 aaKnown RBP21.84■■□□□ 1.09
C9orf3-217ENST00000479161 TESK2Q96S53 571 aa21.84■■□□□ 1.09
C9orf3-217ENST00000479161 ARHGEF10O15013 1369 aa21.84■■□□□ 1.09
C9orf3-217ENST00000479161 CABP2Q9NPB3 220 aa21.83■■□□□ 1.09
C9orf3-217ENST00000479161 LRP6O75581 1613 aa21.83■■□□□ 1.08
C9orf3-217ENST00000479161 PPIP5K1Q6PFW1 1433 aa21.82■■□□□ 1.08
C9orf3-217ENST00000479161 ST20-MTHFSA0A0A6YYL1 179 aa21.82■■□□□ 1.08
C9orf3-217ENST00000479161 USP47Q96K76 1375 aa21.82■■□□□ 1.08
C9orf3-217ENST00000479161 ALS2Q96Q42 1657 aa21.82■■□□□ 1.08
C9orf3-217ENST00000479161 ACEP12821 1306 aa21.81■■□□□ 1.08
C9orf3-217ENST00000479161 XPCQ01831 940 aaPredicted RBP21.81■■□□□ 1.08
C9orf3-217ENST00000479161 ZNF692Q9BU19 519 aaPredicted RBP21.78■■□□□ 1.08
C9orf3-217ENST00000479161 PHF23Q9BUL5 403 aaPredicted RBP21.78■■□□□ 1.08
C9orf3-217ENST00000479161 CABP1Q9NZU7 370 aa21.77■■□□□ 1.08
C9orf3-217ENST00000479161 MARF1Q9Y4F3 1742 aaKnown RBP21.76■■□□□ 1.07
C9orf3-217ENST00000479161 NINLQ9Y2I6 1382 aa21.75■■□□□ 1.07
C9orf3-217ENST00000479161 RGS17Q9UGC6 210 aaPredicted RBP21.75■■□□□ 1.07
C9orf3-217ENST00000479161 CPSF1Q10570 1443 aaKnown RBP21.74■■□□□ 1.07
C9orf3-217ENST00000479161 NUTM2BA6NNL0 878 aaPredicted RBP21.74■■□□□ 1.07
C9orf3-217ENST00000479161 NUTM2EB1AL46 878 aaPredicted RBP21.74■■□□□ 1.07
C9orf3-217ENST00000479161 MEX3CQ5U5Q3 659 aaKnown RBP21.74■■□□□ 1.07
C9orf3-217ENST00000479161 NUTM2AQ8IVF1 878 aaPredicted RBP21.74■■□□□ 1.07
C9orf3-217ENST00000479161 AKAP12Q02952 1782 aa21.74■■□□□ 1.07
C9orf3-217ENST00000479161 TMF1P82094 1093 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms