RNA–Protein interactions for RNA: ENST00000478862.1

NCK1-206, Transcript of NCK adaptor protein 1, humanhuman

TSL 2

Gene NCK1, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-206ENST00000478862 KDM4AO75164 1064 aa8.78□□□□□ -1
NCK1-206ENST00000478862 CTC1Q2NKJ3 1217 aa8.78□□□□□ -1
NCK1-206ENST00000478862 PRDM9Q9NQV7 894 aa8.78□□□□□ -1
NCK1-206ENST00000478862 RNF19BQ6ZMZ0 732 aa8.77□□□□□ -1.01
NCK1-206ENST00000478862 CRIPAKQ8N1N5 446 aa8.77□□□□□ -1.01
NCK1-206ENST00000478862 KRI1Q8N9T8 703 aaKnown RBP8.77□□□□□ -1.01
NCK1-206ENST00000478862 USB1Q9BQ65 265 aaKnown RBP8.77□□□□□ -1.01
NCK1-206ENST00000478862 TOR4AQ9NXH8 423 aa8.77□□□□□ -1.01
NCK1-206ENST00000478862 POTECB2RU33 542 aa8.76□□□□□ -1.01
NCK1-206ENST00000478862 IRF6O14896 467 aa8.76□□□□□ -1.01
NCK1-206ENST00000478862 CD46P15529 392 aa8.76□□□□□ -1.01
NCK1-206ENST00000478862 MINK1Q8N4C8 1332 aaPredicted RBP8.76□□□□□ -1.01
NCK1-206ENST00000478862 AVPP01185 164 aa8.75□□□□□ -1.01
NCK1-206ENST00000478862 WNT7AO00755 349 aa8.74□□□□□ -1.01
NCK1-206ENST00000478862 MMP16P51512 607 aa8.74□□□□□ -1.01
NCK1-206ENST00000478862 MDM2Q00987 491 aaPredicted RBP8.74□□□□□ -1.01
NCK1-206ENST00000478862 SNIP1Q8TAD8 396 aaKnown RBP8.74□□□□□ -1.01
NCK1-206ENST00000478862 REPIN1Q9BWE0 567 aaKnown RBP8.74□□□□□ -1.01
NCK1-206ENST00000478862 TRIM32Q13049 653 aa8.73□□□□□ -1.01
NCK1-206ENST00000478862 C11orf95C9JLR9 678 aaPredicted RBP8.72□□□□□ -1.01
NCK1-206ENST00000478862 PRKCSHP14314 528 aaPredicted RBP8.72□□□□□ -1.01
NCK1-206ENST00000478862 CLCN1P35523 988 aa8.72□□□□□ -1.01
NCK1-206ENST00000478862 TPRNQ4KMQ1 711 aa8.72□□□□□ -1.01
NCK1-206ENST00000478862 CCDC24Q8N4L8 307 aa8.72□□□□□ -1.01
NCK1-206ENST00000478862 SMCPP49901 116 aaPredicted RBP8.71□□□□□ -1.02
NCK1-206ENST00000478862 DXOO77932 396 aaKnown RBP8.7□□□□□ -1.02
NCK1-206ENST00000478862 NUTM1Q86Y26 1132 aa8.7□□□□□ -1.02
NCK1-206ENST00000478862 TREML4Q6UXN2 200 aa8.69□□□□□ -1.02
NCK1-206ENST00000478862 GPCPD1Q9NPB8 672 aa8.69□□□□□ -1.02
NCK1-206ENST00000478862 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.68□□□□□ -1.02
NCK1-206ENST00000478862 HOXA2O43364 376 aa8.67□□□□□ -1.02
NCK1-206ENST00000478862 WNT7BP56706 349 aa8.67□□□□□ -1.02
NCK1-206ENST00000478862 CCDC102AQ96A19 550 aa8.67□□□□□ -1.02
NCK1-206ENST00000478862 MRGPRX2Q96LB1 330 aa8.67□□□□□ -1.02
NCK1-206ENST00000478862 GMPR2Q9P2T1 348 aaKnown RBP8.67□□□□□ -1.02
NCK1-206ENST00000478862 SMPD1P17405 629 aa8.66□□□□□ -1.02
NCK1-206ENST00000478862 SENP2Q9HC62 589 aa8.66□□□□□ -1.02
NCK1-206ENST00000478862 DACH1Q9UI36 760 aa8.66□□□□□ -1.02
NCK1-206ENST00000478862 RC3H1Q5TC82 1133 aaKnown RBP8.65□□□□□ -1.02
NCK1-206ENST00000478862 WFS1O76024 890 aa8.64□□□□□ -1.03
NCK1-206ENST00000478862 JUNDP17535 347 aa8.64□□□□□ -1.03
NCK1-206ENST00000478862 FAM217BQ9NTX9 383 aaPredicted RBP8.64□□□□□ -1.03
NCK1-206ENST00000478862 RETREG3Q86VR2 466 aa8.63□□□□□ -1.03
NCK1-206ENST00000478862 HLA-CQ95604 372 aa8.63□□□□□ -1.03
NCK1-206ENST00000478862 J3QL48 77 aa8.62□□□□□ -1.03
NCK1-206ENST00000478862 ATP13A2Q9NQ11 1180 aa8.62□□□□□ -1.03
NCK1-206ENST00000478862 C6orf229H3BNL8 230 aa8.61□□□□□ -1.03
NCK1-206ENST00000478862 KIFC2Q96AC6 838 aa8.61□□□□□ -1.03
NCK1-206ENST00000478862 NUDT12Q9BQG2 462 aa8.61□□□□□ -1.03
NCK1-206ENST00000478862 ALDH1A1P00352 501 aa8.6□□□□□ -1.03
NCK1-206ENST00000478862 FDX1P10109 184 aa8.6□□□□□ -1.03
NCK1-206ENST00000478862 GUCA2AQ02747 115 aa8.6□□□□□ -1.03
NCK1-206ENST00000478862 EHBP1Q8NDI1 1231 aa8.6□□□□□ -1.03
NCK1-206ENST00000478862 MS4A1P11836 297 aa8.59□□□□□ -1.03
NCK1-206ENST00000478862 HPS1Q92902 700 aa8.59□□□□□ -1.03
NCK1-206ENST00000478862 WASF2Q9Y6W5 498 aa8.59□□□□□ -1.03
NCK1-206ENST00000478862 SKOR1P84550 965 aa8.58□□□□□ -1.04
NCK1-206ENST00000478862 TTLL12Q14166 644 aaPredicted RBP8.58□□□□□ -1.04
NCK1-206ENST00000478862 SYMPKQ92797 1274 aaKnown RBP8.58□□□□□ -1.04
NCK1-206ENST00000478862 TRIM47Q96LD4 638 aa8.58□□□□□ -1.04
NCK1-206ENST00000478862 CCNYL3P0C7X3 344 aa8.57□□□□□ -1.04
NCK1-206ENST00000478862 SSTR3P32745 418 aaPredicted RBP8.57□□□□□ -1.04
NCK1-206ENST00000478862 INSM1Q01101 510 aaPredicted RBP8.56□□□□□ -1.04
NCK1-206ENST00000478862 LCE2AQ5TA79 106 aaPredicted RBP8.55□□□□□ -1.04
NCK1-206ENST00000478862 SPDYE5A6NIY4 337 aa8.54□□□□□ -1.04
NCK1-206ENST00000478862 SNRPBP14678 240 aaKnown RBP8.54□□□□□ -1.04
NCK1-206ENST00000478862 TERTO14746 1132 aaKnown RBP8.53□□□□□ -1.04
NCK1-206ENST00000478862 NFX1Q12986 1120 aaKnown RBP8.53□□□□□ -1.04
NCK1-206ENST00000478862 DIXDC1Q155Q3 683 aa8.53□□□□□ -1.04
NCK1-206ENST00000478862 PTPRNQ16849 979 aa8.53□□□□□ -1.04
NCK1-206ENST00000478862 SLC16A10Q8TF71 515 aa8.53□□□□□ -1.04
NCK1-206ENST00000478862 ZC3H15Q8WU90 426 aaKnown RBP8.53□□□□□ -1.04
NCK1-206ENST00000478862 PLEKHG3A1L390 1219 aa8.52□□□□□ -1.05
NCK1-206ENST00000478862 PTCRAQ6ISU1 281 aaPredicted RBP8.52□□□□□ -1.05
NCK1-206ENST00000478862 SPIRE2Q8WWL2 714 aa8.52□□□□□ -1.05
NCK1-206ENST00000478862 STK17AQ9UEE5 414 aa8.52□□□□□ -1.05
NCK1-206ENST00000478862 PCDHGC3Q9UN70 934 aa8.52□□□□□ -1.05
NCK1-206ENST00000478862 CAPN5O15484 640 aaPredicted RBP8.51□□□□□ -1.05
NCK1-206ENST00000478862 MTMR2Q13614 643 aa8.51□□□□□ -1.05
NCK1-206ENST00000478862 WIPF1O43516 503 aa8.5□□□□□ -1.05
NCK1-206ENST00000478862 PRR7Q8TB68 274 aa8.5□□□□□ -1.05
NCK1-206ENST00000478862 UNC93B1Q9H1C4 597 aa8.5□□□□□ -1.05
NCK1-206ENST00000478862 EVA1BQ9NVM1 165 aa8.5□□□□□ -1.05
NCK1-206ENST00000478862 MOXD2PA6NHM9 499 aa8.49□□□□□ -1.05
NCK1-206ENST00000478862 SIAH2O43255 324 aa8.49□□□□□ -1.05
NCK1-206ENST00000478862 NDUFV2P19404 249 aa8.49□□□□□ -1.05
NCK1-206ENST00000478862 SH3BP2P78314 561 aa8.49□□□□□ -1.05
NCK1-206ENST00000478862 AMHR2Q16671 573 aa8.49□□□□□ -1.05
NCK1-206ENST00000478862 DESI1Q6ICB0 168 aa8.49□□□□□ -1.05
NCK1-206ENST00000478862 BARGINQ6ZT62 677 aa8.49□□□□□ -1.05
NCK1-206ENST00000478862 VARSP26640 1264 aaKnown RBP8.48□□□□□ -1.05
NCK1-206ENST00000478862 KCNH2Q12809 1159 aa8.48□□□□□ -1.05
NCK1-206ENST00000478862 ZMYND10O75800 440 aa8.47□□□□□ -1.05
NCK1-206ENST00000478862 GJA5P36382 358 aa8.47□□□□□ -1.05
NCK1-206ENST00000478862 LINC01559Q495D7 138 aa8.47□□□□□ -1.05
NCK1-206ENST00000478862 GIGYF2Q6Y7W6 1299 aaKnown RBP8.47□□□□□ -1.05
NCK1-206ENST00000478862 BAP1Q92560 729 aa8.47□□□□□ -1.05
NCK1-206ENST00000478862 BEGAINQ9BUH8 593 aa8.47□□□□□ -1.05
NCK1-206ENST00000478862 FAM181BA6NEQ2 426 aa8.46□□□□□ -1.06
NCK1-206ENST00000478862 CTHP32929 405 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms