RNA–Protein interactions for RNA: ENST00000478389.5

NELFCD-206, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 2

Gene NELFCD, Length 3,581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-206ENST00000478389 OFD1O75665 1012 aa10.59□□□□□ -0.71
NELFCD-206ENST00000478389 VIRMAQ69YN4 1812 aaKnown RBP10.59□□□□□ -0.71
NELFCD-206ENST00000478389 DNAJC2Q99543 621 aaKnown RBP10.59□□□□□ -0.71
NELFCD-206ENST00000478389 TCOF1Q13428 1488 aaKnown RBP10.58□□□□□ -0.72
NELFCD-206ENST00000478389 CCDC173Q0VFZ6 552 aa10.58□□□□□ -0.72
NELFCD-206ENST00000478389 C20orf194Q5TEA3 1177 aa10.58□□□□□ -0.72
NELFCD-206ENST00000478389 BCORL1Q5H9F3 1711 aa10.58□□□□□ -0.72
NELFCD-206ENST00000478389 ZSCAN30Q86W11 494 aa10.58□□□□□ -0.72
NELFCD-206ENST00000478389 ERBB4Q15303 1308 aa10.58□□□□□ -0.72
NELFCD-206ENST00000478389 BLMP54132 1417 aaPredicted RBP10.58□□□□□ -0.72
NELFCD-206ENST00000478389 NOL8Q76FK4 1167 aaKnown RBP10.57□□□□□ -0.72
NELFCD-206ENST00000478389 SKOR2Q2VWA4 1001 aaPredicted RBP10.57□□□□□ -0.72
NELFCD-206ENST00000478389 SGSM3Q96HU1 749 aa10.57□□□□□ -0.72
NELFCD-206ENST00000478389 KIF14Q15058 1648 aa10.56□□□□□ -0.72
NELFCD-206ENST00000478389 PARD3Q8TEW0 1356 aa10.56□□□□□ -0.72
NELFCD-206ENST00000478389 KDM5CP41229 1560 aa10.56□□□□□ -0.72
NELFCD-206ENST00000478389 TBC1D2Q9BYX2 928 aa10.56□□□□□ -0.72
NELFCD-206ENST00000478389 FAM13BQ9NYF5 915 aa10.56□□□□□ -0.72
NELFCD-206ENST00000478389 ZMYM3Q14202 1370 aa10.56□□□□□ -0.72
NELFCD-206ENST00000478389 CCDC144AA2RUR9 1427 aa10.56□□□□□ -0.72
NELFCD-206ENST00000478389 SHROOM2Q13796 1616 aa10.56□□□□□ -0.72
NELFCD-206ENST00000478389 CC2D1BQ5T0F9 858 aaKnown RBP10.56□□□□□ -0.72
NELFCD-206ENST00000478389 TMTC2Q8N394 836 aa10.56□□□□□ -0.72
NELFCD-206ENST00000478389 ASXL2Q76L83 1435 aa10.56□□□□□ -0.72
NELFCD-206ENST00000478389 UTP14CQ5TAP6 766 aaKnown RBP10.55□□□□□ -0.72
NELFCD-206ENST00000478389 LOC102724159A0A0B4J2E5 919 aa10.55□□□□□ -0.72
NELFCD-206ENST00000478389 PWP2Q15269 919 aaKnown RBP10.55□□□□□ -0.72
NELFCD-206ENST00000478389 PPP4R3CPQ6ZMV5 832 aa10.55□□□□□ -0.72
NELFCD-206ENST00000478389 TBC1D32Q96NH3 1257 aa10.55□□□□□ -0.72
NELFCD-206ENST00000478389 ABCC2Q92887 1545 aa10.54□□□□□ -0.72
NELFCD-206ENST00000478389 MBD5Q9P267 1494 aa10.54□□□□□ -0.72
NELFCD-206ENST00000478389 IFNLR1Q8IU57 520 aaPredicted RBP10.54□□□□□ -0.72
NELFCD-206ENST00000478389 GPBP1L1Q9HC44 474 aaPredicted RBP10.54□□□□□ -0.72
NELFCD-206ENST00000478389 STK24Q9Y6E0 443 aa10.54□□□□□ -0.72
NELFCD-206ENST00000478389 MCCP23508 829 aa10.54□□□□□ -0.72
NELFCD-206ENST00000478389 GBP4Q96PP9 640 aa10.54□□□□□ -0.72
NELFCD-206ENST00000478389 ATP10BO94823 1461 aa10.53□□□□□ -0.72
NELFCD-206ENST00000478389 KDM6BO15054 1643 aa10.53□□□□□ -0.72
NELFCD-206ENST00000478389 ST20-MTHFSA0A0A6YYL1 179 aa10.53□□□□□ -0.72
NELFCD-206ENST00000478389 ROCK1Q13464 1354 aa10.53□□□□□ -0.72
NELFCD-206ENST00000478389 CGNL1Q0VF96 1302 aa10.53□□□□□ -0.72
NELFCD-206ENST00000478389 CDK13Q14004 1512 aaKnown RBP10.53□□□□□ -0.72
NELFCD-206ENST00000478389 SETQ01105 290 aaPredicted RBP10.53□□□□□ -0.72
NELFCD-206ENST00000478389 SLC24A3Q9HC58 644 aa10.53□□□□□ -0.72
NELFCD-206ENST00000478389 CFDP1Q9UEE9 299 aaPredicted RBP10.53□□□□□ -0.72
NELFCD-206ENST00000478389 DYNC1I1O14576 645 aa10.52□□□□□ -0.72
NELFCD-206ENST00000478389 RALGAPBQ86X10 1494 aa10.52□□□□□ -0.73
NELFCD-206ENST00000478389 RIPK4P57078 832 aa10.52□□□□□ -0.73
NELFCD-206ENST00000478389 CSPP1Q1MSJ5 1256 aa10.52□□□□□ -0.73
NELFCD-206ENST00000478389 HS1BP3Q53T59 392 aa10.52□□□□□ -0.73
NELFCD-206ENST00000478389 PPP1R9BQ96SB3 815 aa10.52□□□□□ -0.73
NELFCD-206ENST00000478389 GOLGA2Q08379 1002 aa10.51□□□□□ -0.73
NELFCD-206ENST00000478389 FOSBP53539 338 aa10.51□□□□□ -0.73
NELFCD-206ENST00000478389 NINLQ9Y2I6 1382 aa10.51□□□□□ -0.73
NELFCD-206ENST00000478389 WDR43Q15061 677 aaKnown RBP eCLIP10.51□□□□□ -0.73
NELFCD-206ENST00000478389 RGL3Q3MIN7 710 aa10.51□□□□□ -0.73
NELFCD-206ENST00000478389 HSCBQ8IWL3 235 aa10.51□□□□□ -0.73
NELFCD-206ENST00000478389 NUP153P49790 1475 aaKnown RBP10.51□□□□□ -0.73
NELFCD-206ENST00000478389 NLRP1Q9C000 1473 aa10.51□□□□□ -0.73
NELFCD-206ENST00000478389 SEC24BO95487 1268 aa10.5□□□□□ -0.73
NELFCD-206ENST00000478389 DUSP27Q5VZP5 1158 aa10.5□□□□□ -0.73
NELFCD-206ENST00000478389 FBXW7Q969H0 707 aa10.5□□□□□ -0.73
NELFCD-206ENST00000478389 R3HCC1Q9Y3T6 440 aaKnown RBP10.5□□□□□ -0.73
NELFCD-206ENST00000478389 ZNF644Q9H582 1327 aaPredicted RBP10.5□□□□□ -0.73
NELFCD-206ENST00000478389 NASPP49321 788 aaPredicted RBP10.5□□□□□ -0.73
NELFCD-206ENST00000478389 DMTNQ08495 405 aa10.5□□□□□ -0.73
NELFCD-206ENST00000478389 MAPK8IP2Q13387 824 aaPredicted RBP10.5□□□□□ -0.73
NELFCD-206ENST00000478389 EPRSP07814 1512 aaKnown RBP10.5□□□□□ -0.73
NELFCD-206ENST00000478389 UHRF1BP1Q6BDS2 1440 aa10.5□□□□□ -0.73
NELFCD-206ENST00000478389 UQCRHLA0A096LP55 91 aa10.49□□□□□ -0.73
NELFCD-206ENST00000478389 UQCRHP07919 91 aa10.49□□□□□ -0.73
NELFCD-206ENST00000478389 EFCAB2Q5VUJ9 269 aa10.49□□□□□ -0.73
NELFCD-206ENST00000478389 SPINK5Q9NQ38 1064 aaPredicted RBP10.49□□□□□ -0.73
NELFCD-206ENST00000478389 CIZ1Q9ULV3 898 aaPredicted RBP10.49□□□□□ -0.73
NELFCD-206ENST00000478389 LMOD2Q6P5Q4 547 aa10.49□□□□□ -0.73
NELFCD-206ENST00000478389 STAC3Q96MF2 364 aa10.49□□□□□ -0.73
NELFCD-206ENST00000478389 E9PCH4 1651 aa10.49□□□□□ -0.73
NELFCD-206ENST00000478389 GOLGA6L22H0YM25 854 aa10.49□□□□□ -0.73
NELFCD-206ENST00000478389 PMFBP1Q8TBY8 1022 aa10.49□□□□□ -0.73
NELFCD-206ENST00000478389 SCAPERQ9BY12 1400 aa10.48□□□□□ -0.73
NELFCD-206ENST00000478389 RAPGEF6Q8TEU7 1601 aa10.48□□□□□ -0.73
NELFCD-206ENST00000478389 MKRN3Q13064 507 aaKnown RBP10.48□□□□□ -0.73
NELFCD-206ENST00000478389 ADCY10Q96PN6 1610 aa10.48□□□□□ -0.73
NELFCD-206ENST00000478389 CD109Q6YHK3 1445 aa10.48□□□□□ -0.73
NELFCD-206ENST00000478389 KIF20AO95235 890 aa10.48□□□□□ -0.73
NELFCD-206ENST00000478389 ANKRD30AQ9BXX3 1397 aa10.48□□□□□ -0.73
NELFCD-206ENST00000478389 PDE3AQ14432 1141 aa10.47□□□□□ -0.73
NELFCD-206ENST00000478389 ZHX1Q9UKY1 873 aaPredicted RBP10.47□□□□□ -0.73
NELFCD-206ENST00000478389 APPP05067 770 aa10.47□□□□□ -0.73
NELFCD-206ENST00000478389 CCDC94Q9BW85 323 aaPredicted RBP10.47□□□□□ -0.73
NELFCD-206ENST00000478389 GTPBP4Q9BZE4 634 aaKnown RBP10.47□□□□□ -0.73
NELFCD-206ENST00000478389 MAFGO15525 162 aa10.47□□□□□ -0.73
NELFCD-206ENST00000478389 CLUAP1Q96AJ1 413 aa10.47□□□□□ -0.73
NELFCD-206ENST00000478389 ZNF500O60304 480 aaPredicted RBP10.46□□□□□ -0.73
NELFCD-206ENST00000478389 PPP1R1BQ9UD71 204 aaPredicted RBP10.46□□□□□ -0.73
NELFCD-206ENST00000478389 WDR7Q9Y4E6 1490 aa10.46□□□□□ -0.73
NELFCD-206ENST00000478389 RAPGEF3O95398 923 aa10.46□□□□□ -0.73
NELFCD-206ENST00000478389 MCM5P33992 734 aa10.46□□□□□ -0.73
NELFCD-206ENST00000478389 TAF3Q5VWG9 929 aa10.46□□□□□ -0.73
NELFCD-206ENST00000478389 KIAA1107Q9UPP5 1409 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms