RNA–Protein interactions for RNA: ENST00000478359.5

TRAF3IP3-213, Transcript of TRAF3 interacting protein 3, humanhuman

TSL 1 (best)

Gene TRAF3IP3, Length 1,860 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP3-213ENST00000478359 CGNL1Q0VF96 1302 aa16.59■□□□□ 0.25
TRAF3IP3-213ENST00000478359 NGEFQ8N5V2 710 aa16.59■□□□□ 0.25
TRAF3IP3-213ENST00000478359 POLR3AO14802 1390 aaPredicted RBP16.58■□□□□ 0.24
TRAF3IP3-213ENST00000478359 SLC12A5Q9H2X9 1139 aa16.57■□□□□ 0.24
TRAF3IP3-213ENST00000478359 POGKQ9P215 609 aa16.57■□□□□ 0.24
TRAF3IP3-213ENST00000478359 ADAMTS8Q9UP79 889 aa16.57■□□□□ 0.24
TRAF3IP3-213ENST00000478359 SETD1AO15047 1707 aaKnown RBP16.57■□□□□ 0.24
TRAF3IP3-213ENST00000478359 TNRQ92752 1358 aa16.56■□□□□ 0.24
TRAF3IP3-213ENST00000478359 ABCC11Q96J66 1382 aa16.55■□□□□ 0.24
TRAF3IP3-213ENST00000478359 MORC1Q86VD1 984 aa16.54■□□□□ 0.24
TRAF3IP3-213ENST00000478359 PRAM1Q96QH2 718 aa16.54■□□□□ 0.24
TRAF3IP3-213ENST00000478359 STK26Q9P289 416 aa16.54■□□□□ 0.24
TRAF3IP3-213ENST00000478359 NLRP1Q9C000 1473 aa16.54■□□□□ 0.24
TRAF3IP3-213ENST00000478359 SRPK2P78362 688 aaKnown RBP16.53■□□□□ 0.24
TRAF3IP3-213ENST00000478359 TERF2IPQ9NYB0 399 aa16.53■□□□□ 0.24
TRAF3IP3-213ENST00000478359 KNDC1Q76NI1 1749 aa16.52■□□□□ 0.24
TRAF3IP3-213ENST00000478359 UBR1Q8IWV7 1749 aa16.52■□□□□ 0.24
TRAF3IP3-213ENST00000478359 IRX6P78412 446 aaPredicted RBP16.52■□□□□ 0.23
TRAF3IP3-213ENST00000478359 SIRT1Q96EB6 747 aa16.52■□□□□ 0.23
TRAF3IP3-213ENST00000478359 NRXN3Q9Y4C0 1643 aa16.51■□□□□ 0.23
TRAF3IP3-213ENST00000478359 MED14O60244 1454 aa16.51■□□□□ 0.23
TRAF3IP3-213ENST00000478359 CABP2Q9NPB3 220 aa16.5■□□□□ 0.23
TRAF3IP3-213ENST00000478359 CFAP53Q96M91 514 aa16.5■□□□□ 0.23
TRAF3IP3-213ENST00000478359 RCAN3Q9UKA8 241 aa16.5■□□□□ 0.23
TRAF3IP3-213ENST00000478359 TMEM2Q9UHN6 1383 aa16.49■□□□□ 0.23
TRAF3IP3-213ENST00000478359 TECPR2O15040 1411 aa16.49■□□□□ 0.23
TRAF3IP3-213ENST00000478359 FAM135BQ49AJ0 1406 aa16.49■□□□□ 0.23
TRAF3IP3-213ENST00000478359 ANKRD26Q9UPS8 1709 aa16.49■□□□□ 0.23
TRAF3IP3-213ENST00000478359 SAFB2Q14151 953 aaKnown RBP eCLIP16.48■□□□□ 0.23
TRAF3IP3-213ENST00000478359 A0A1W2PP64 1363 aa16.48■□□□□ 0.23
TRAF3IP3-213ENST00000478359 HDGFL2Q7Z4V5 671 aaPredicted RBP16.48■□□□□ 0.23
TRAF3IP3-213ENST00000478359 MINK1Q8N4C8 1332 aaPredicted RBP16.48■□□□□ 0.23
TRAF3IP3-213ENST00000478359 SALL2Q9Y467 1007 aaPredicted RBP16.47■□□□□ 0.23
TRAF3IP3-213ENST00000478359 ATP7BP35670 1465 aa16.46■□□□□ 0.23
TRAF3IP3-213ENST00000478359 ZNF521Q96K83 1311 aa16.46■□□□□ 0.23
TRAF3IP3-213ENST00000478359 CPS1P31327 1500 aa16.46■□□□□ 0.23
TRAF3IP3-213ENST00000478359 RRP1P56182 461 aaKnown RBP16.46■□□□□ 0.22
TRAF3IP3-213ENST00000478359 GOLGA2Q08379 1002 aa16.46■□□□□ 0.22
TRAF3IP3-213ENST00000478359 CDK19Q9BWU1 502 aa16.46■□□□□ 0.22
TRAF3IP3-213ENST00000478359 SHPRHQ149N8 1683 aa16.45■□□□□ 0.22
TRAF3IP3-213ENST00000478359 NCBP3Q53F19 620 aaKnown RBP16.44■□□□□ 0.22
TRAF3IP3-213ENST00000478359 FER1L4A9Z1Z3 1794 aa16.44■□□□□ 0.22
TRAF3IP3-213ENST00000478359 TSHZ2Q9NRE2 1034 aa16.44■□□□□ 0.22
TRAF3IP3-213ENST00000478359 C3P01024 1663 aa16.43■□□□□ 0.22
TRAF3IP3-213ENST00000478359 PLEKHG1Q9ULL1 1385 aa16.43■□□□□ 0.22
TRAF3IP3-213ENST00000478359 CD163L1Q9NR16 1453 aa16.43■□□□□ 0.22
TRAF3IP3-213ENST00000478359 PLEKHH1Q9ULM0 1364 aa16.43■□□□□ 0.22
TRAF3IP3-213ENST00000478359 CDCA7LQ96GN5 454 aa16.42■□□□□ 0.22
TRAF3IP3-213ENST00000478359 SENP3-EIF4A1A0A087X0R7 540 aa16.42■□□□□ 0.22
TRAF3IP3-213ENST00000478359 KIF20BQ96Q89 1820 aa16.41■□□□□ 0.22
TRAF3IP3-213ENST00000478359 MTHFSP49914 203 aa16.41■□□□□ 0.22
TRAF3IP3-213ENST00000478359 SLIT1O75093 1534 aa16.41■□□□□ 0.22
TRAF3IP3-213ENST00000478359 METP08581 1390 aa16.41■□□□□ 0.22
TRAF3IP3-213ENST00000478359 EID1Q9Y6B2 187 aa16.4■□□□□ 0.22
TRAF3IP3-213ENST00000478359 RUNDC1Q96C34 613 aa16.39■□□□□ 0.22
TRAF3IP3-213ENST00000478359 E9PSI1 815 aa16.39■□□□□ 0.21
TRAF3IP3-213ENST00000478359 WASLO00401 505 aaPredicted RBP16.39■□□□□ 0.21
TRAF3IP3-213ENST00000478359 APAF1O14727 1248 aa16.39■□□□□ 0.21
TRAF3IP3-213ENST00000478359 ARHGAP23Q9P227 1491 aa16.38■□□□□ 0.21
TRAF3IP3-213ENST00000478359 DUSP27Q5VZP5 1158 aa16.38■□□□□ 0.21
TRAF3IP3-213ENST00000478359 CCDC136Q96JN2 1154 aa16.38■□□□□ 0.21
TRAF3IP3-213ENST00000478359 SENP3Q9H4L4 574 aaPredicted RBP16.38■□□□□ 0.21
TRAF3IP3-213ENST00000478359 ADGRB2O60241 1585 aa16.38■□□□□ 0.21
TRAF3IP3-213ENST00000478359 FYB1O15117 783 aa16.37■□□□□ 0.21
TRAF3IP3-213ENST00000478359 SLFN5Q08AF3 891 aa16.37■□□□□ 0.21
TRAF3IP3-213ENST00000478359 WAPLQ7Z5K2 1190 aa16.37■□□□□ 0.21
TRAF3IP3-213ENST00000478359 TRMT2AQ8IZ69 625 aaKnown RBP16.37■□□□□ 0.21
TRAF3IP3-213ENST00000478359 CABP1Q9NZU7 370 aa16.37■□□□□ 0.21
TRAF3IP3-213ENST00000478359 ADAMTS13Q76LX8 1427 aa16.37■□□□□ 0.21
TRAF3IP3-213ENST00000478359 TNNT2P45379 298 aaPredicted RBP16.37■□□□□ 0.21
TRAF3IP3-213ENST00000478359 CCDC146Q8IYE0 955 aa16.37■□□□□ 0.21
TRAF3IP3-213ENST00000478359 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.37■□□□□ 0.21
TRAF3IP3-213ENST00000478359 DIP2AQ14689 1571 aa16.37■□□□□ 0.21
TRAF3IP3-213ENST00000478359 B4GALNT3Q6L9W6 998 aa16.36■□□□□ 0.21
TRAF3IP3-213ENST00000478359 CPSF1Q10570 1443 aaKnown RBP16.35■□□□□ 0.21
TRAF3IP3-213ENST00000478359 EDC4Q6P2E9 1401 aaKnown RBP16.35■□□□□ 0.21
TRAF3IP3-213ENST00000478359 THEMISQ8N1K5 641 aaPredicted RBP16.35■□□□□ 0.21
TRAF3IP3-213ENST00000478359 NKTRP30414 1462 aaKnown RBP16.35■□□□□ 0.21
TRAF3IP3-213ENST00000478359 CCDC27Q2M243 656 aa16.35■□□□□ 0.21
TRAF3IP3-213ENST00000478359 PNNQ9H307 717 aaKnown RBP16.35■□□□□ 0.21
TRAF3IP3-213ENST00000478359 IQSEC2Q5JU85 1478 aa16.34■□□□□ 0.21
TRAF3IP3-213ENST00000478359 TXNDC2Q86VQ3 553 aa16.34■□□□□ 0.21
TRAF3IP3-213ENST00000478359 CDC42BPGQ6DT37 1551 aa16.34■□□□□ 0.21
TRAF3IP3-213ENST00000478359 PPIP5K1Q6PFW1 1433 aa16.34■□□□□ 0.21
TRAF3IP3-213ENST00000478359 GGNBP2Q9H3C7 697 aa16.33■□□□□ 0.21
TRAF3IP3-213ENST00000478359 CCDC61Q9Y6R9 512 aa16.33■□□□□ 0.21
TRAF3IP3-213ENST00000478359 ZNF692Q9BU19 519 aaPredicted RBP16.33■□□□□ 0.2
TRAF3IP3-213ENST00000478359 MON2Q7Z3U7 1717 aa16.31■□□□□ 0.2
TRAF3IP3-213ENST00000478359 WDR63Q8IWG1 891 aa16.31■□□□□ 0.2
TRAF3IP3-213ENST00000478359 WWC1Q8IX03 1113 aa16.31■□□□□ 0.2
TRAF3IP3-213ENST00000478359 TBX22Q9Y458 520 aa16.31■□□□□ 0.2
TRAF3IP3-213ENST00000478359 PNPLA6Q8IY17 1366 aa16.31■□□□□ 0.2
TRAF3IP3-213ENST00000478359 COL3A1P02461 1466 aaPredicted RBP16.31■□□□□ 0.2
TRAF3IP3-213ENST00000478359 ITSN1Q15811 1721 aa16.31■□□□□ 0.2
TRAF3IP3-213ENST00000478359 LTKP29376 864 aa16.31■□□□□ 0.2
TRAF3IP3-213ENST00000478359 NUDT16Q96DE0 195 aaKnown RBP16.31■□□□□ 0.2
TRAF3IP3-213ENST00000478359 CEBPAP49715 358 aaPredicted RBP16.3■□□□□ 0.2
TRAF3IP3-213ENST00000478359 AKAP12Q02952 1782 aa16.3■□□□□ 0.2
TRAF3IP3-213ENST00000478359 PHF23Q9BUL5 403 aaPredicted RBP16.3■□□□□ 0.2
TRAF3IP3-213ENST00000478359 PTCH1Q13635 1447 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms