RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 LAMC1P11047 1609 aa21.29■■□□□ 1
SMARCE1-209ENST00000478349 RXRBP28702 533 aa21.29■■□□□ 1
SMARCE1-209ENST00000478349 ORAI2Q96SN7 254 aa21.29■■□□□ 1
SMARCE1-209ENST00000478349 AFF2P51816 1311 aa21.29■■□□□ 1
SMARCE1-209ENST00000478349 MYOM2P54296 1465 aa21.28■■□□□ 1
SMARCE1-209ENST00000478349 DDX17Q92841 729 aaKnown RBP21.28■■□□□ 1
SMARCE1-209ENST00000478349 IFT172Q9UG01 1749 aa21.27■■□□□ 1
SMARCE1-209ENST00000478349 ESCO1Q5FWF5 840 aa21.27■■□□□ 1
SMARCE1-209ENST00000478349 C8orf37Q96NL8 207 aa21.26■□□□□ 0.99
SMARCE1-209ENST00000478349 YTHDC2Q9H6S0 1430 aaKnown RBP21.26■□□□□ 0.99
SMARCE1-209ENST00000478349 CDK12Q9NYV4 1490 aaPredicted RBP21.26■□□□□ 0.99
SMARCE1-209ENST00000478349 DHX57Q6P158 1386 aaKnown RBP21.25■□□□□ 0.99
SMARCE1-209ENST00000478349 KNDC1Q76NI1 1749 aa21.24■□□□□ 0.99
SMARCE1-209ENST00000478349 SIRT1Q96EB6 747 aa21.24■□□□□ 0.99
SMARCE1-209ENST00000478349 TMEM132EQ6IEE7 984 aa21.23■□□□□ 0.99
SMARCE1-209ENST00000478349 C14orf93Q9H972 538 aaKnown RBP21.23■□□□□ 0.99
SMARCE1-209ENST00000478349 NRXN1Q9ULB1 1477 aa21.23■□□□□ 0.99
SMARCE1-209ENST00000478349 WAPLQ7Z5K2 1190 aa21.22■□□□□ 0.99
SMARCE1-209ENST00000478349 NGLY1Q96IV0 654 aa21.22■□□□□ 0.99
SMARCE1-209ENST00000478349 ADAMTS2O95450 1211 aa21.2■□□□□ 0.98
SMARCE1-209ENST00000478349 HRCP23327 699 aa21.2■□□□□ 0.98
SMARCE1-209ENST00000478349 STAC3Q96MF2 364 aa21.2■□□□□ 0.98
SMARCE1-209ENST00000478349 RBM6P78332 1123 aaKnown RBP21.19■□□□□ 0.98
SMARCE1-209ENST00000478349 FOXO3O43524 673 aa21.17■□□□□ 0.98
SMARCE1-209ENST00000478349 QTRT2Q9H974 415 aaKnown RBP21.17■□□□□ 0.98
SMARCE1-209ENST00000478349 PLEKHH1Q9ULM0 1364 aa21.17■□□□□ 0.98
SMARCE1-209ENST00000478349 PXDNQ92626 1479 aa21.17■□□□□ 0.98
SMARCE1-209ENST00000478349 CFAP70Q5T0N1 1121 aa21.16■□□□□ 0.98
SMARCE1-209ENST00000478349 KIF1AQ12756 1690 aa21.15■□□□□ 0.98
SMARCE1-209ENST00000478349 COL22A1Q8NFW1 1626 aaPredicted RBP21.15■□□□□ 0.98
SMARCE1-209ENST00000478349 NUTM2FA1L443 756 aa21.15■□□□□ 0.98
SMARCE1-209ENST00000478349 POGKQ9P215 609 aa21.14■□□□□ 0.97
SMARCE1-209ENST00000478349 USP21Q9UK80 565 aa21.14■□□□□ 0.97
SMARCE1-209ENST00000478349 DLC1Q96QB1 1528 aa21.14■□□□□ 0.97
SMARCE1-209ENST00000478349 EIF3AQ14152 1382 aaKnown RBP21.13■□□□□ 0.97
SMARCE1-209ENST00000478349 TRPC5Q9UL62 973 aaPredicted RBP21.13■□□□□ 0.97
SMARCE1-209ENST00000478349 FMN2Q9NZ56 1722 aa21.12■□□□□ 0.97
SMARCE1-209ENST00000478349 PSME1Q06323 249 aa21.12■□□□□ 0.97
SMARCE1-209ENST00000478349 PRAM1Q96QH2 718 aa21.12■□□□□ 0.97
SMARCE1-209ENST00000478349 XPCQ01831 940 aaPredicted RBP21.11■□□□□ 0.97
SMARCE1-209ENST00000478349 FNBP4Q8N3X1 1017 aaPredicted RBP21.1■□□□□ 0.97
SMARCE1-209ENST00000478349 DCAF11Q8TEB1 546 aa21.1■□□□□ 0.97
SMARCE1-209ENST00000478349 UPF1Q92900 1129 aaKnown RBP eCLIP21.1■□□□□ 0.97
SMARCE1-209ENST00000478349 RGS12O14924 1447 aa21.1■□□□□ 0.97
SMARCE1-209ENST00000478349 ANKARQ7Z5J8 1434 aa21.1■□□□□ 0.97
SMARCE1-209ENST00000478349 PHF8Q9UPP1 1060 aa21.09■□□□□ 0.97
SMARCE1-209ENST00000478349 SPATA31A3Q5VYP0 1347 aa21.07■□□□□ 0.96
SMARCE1-209ENST00000478349 HAP1P54257 671 aaPredicted RBP21.07■□□□□ 0.96
SMARCE1-209ENST00000478349 SAFB2Q14151 953 aaKnown RBP eCLIP21.07■□□□□ 0.96
SMARCE1-209ENST00000478349 KRT28Q7Z3Y7 464 aa21.07■□□□□ 0.96
SMARCE1-209ENST00000478349 TNS3Q68CZ2 1445 aa21.06■□□□□ 0.96
SMARCE1-209ENST00000478349 KDM2AQ9Y2K7 1162 aa21.06■□□□□ 0.96
SMARCE1-209ENST00000478349 ADGRB1O14514 1584 aa21.06■□□□□ 0.96
SMARCE1-209ENST00000478349 ARHGEF10O15013 1369 aa21.05■□□□□ 0.96
SMARCE1-209ENST00000478349 ADGRB2O60241 1585 aa21.05■□□□□ 0.96
SMARCE1-209ENST00000478349 ATRNO75882 1429 aa21.04■□□□□ 0.96
SMARCE1-209ENST00000478349 SBNO1A3KN83 1393 aa21.04■□□□□ 0.96
SMARCE1-209ENST00000478349 ATAD2Q6PL18 1390 aa21.04■□□□□ 0.96
SMARCE1-209ENST00000478349 TRAK1Q9UPV9 953 aa21.03■□□□□ 0.96
SMARCE1-209ENST00000478349 GPRASP1Q5JY77 1395 aa21■□□□□ 0.95
SMARCE1-209ENST00000478349 LMOD2Q6P5Q4 547 aa20.99■□□□□ 0.95
SMARCE1-209ENST00000478349 BCL9LQ86UU0 1499 aa20.99■□□□□ 0.95
SMARCE1-209ENST00000478349 MINK1Q8N4C8 1332 aaPredicted RBP20.98■□□□□ 0.95
SMARCE1-209ENST00000478349 TULP4Q9NRJ4 1543 aa20.98■□□□□ 0.95
SMARCE1-209ENST00000478349 UNC5CLQ8IV45 518 aa20.97■□□□□ 0.95
SMARCE1-209ENST00000478349 USP32Q8NFA0 1604 aa20.96■□□□□ 0.95
SMARCE1-209ENST00000478349 WASLO00401 505 aaPredicted RBP20.96■□□□□ 0.95
SMARCE1-209ENST00000478349 GJD4Q96KN9 370 aaPredicted RBP20.96■□□□□ 0.95
SMARCE1-209ENST00000478349 HIRIP3Q9BW71 556 aaPredicted RBP20.96■□□□□ 0.95
SMARCE1-209ENST00000478349 MARF1Q9Y4F3 1742 aaKnown RBP20.95■□□□□ 0.94
SMARCE1-209ENST00000478349 SLIT2O94813 1529 aa20.95■□□□□ 0.94
SMARCE1-209ENST00000478349 PMFBP1Q8TBY8 1022 aa20.95■□□□□ 0.94
SMARCE1-209ENST00000478349 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.93■□□□□ 0.94
SMARCE1-209ENST00000478349 NGDNQ8NEJ9 315 aaKnown RBP20.92■□□□□ 0.94
SMARCE1-209ENST00000478349 CCDC125Q86Z20 511 aa20.9■□□□□ 0.94
SMARCE1-209ENST00000478349 RALGAPBQ86X10 1494 aa20.89■□□□□ 0.94
SMARCE1-209ENST00000478349 VPS72Q15906 364 aa20.88■□□□□ 0.93
SMARCE1-209ENST00000478349 CABLES1Q8TDN4 633 aa20.88■□□□□ 0.93
SMARCE1-209ENST00000478349 PRR36Q9H6K5 1346 aa20.87■□□□□ 0.93
SMARCE1-209ENST00000478349 PLEKHG5O94827 1062 aa20.87■□□□□ 0.93
SMARCE1-209ENST00000478349 CCDC9Q9Y3X0 531 aaKnown RBP20.87■□□□□ 0.93
SMARCE1-209ENST00000478349 RGPD8O14715 1765 aaPredicted RBP20.87■□□□□ 0.93
SMARCE1-209ENST00000478349 MSH5O43196 834 aa20.86■□□□□ 0.93
SMARCE1-209ENST00000478349 ARHGEF28Q8N1W1 1705 aaKnown RBP20.86■□□□□ 0.93
SMARCE1-209ENST00000478349 KIAA1210Q9ULL0 1709 aa20.86■□□□□ 0.93
SMARCE1-209ENST00000478349 PAK3O75914 559 aaPredicted RBP20.85■□□□□ 0.93
SMARCE1-209ENST00000478349 ATP7BP35670 1465 aa20.85■□□□□ 0.93
SMARCE1-209ENST00000478349 NUDT16Q96DE0 195 aaKnown RBP20.84■□□□□ 0.93
SMARCE1-209ENST00000478349 ITSN1Q15811 1721 aa20.84■□□□□ 0.93
SMARCE1-209ENST00000478349 NWD2Q9ULI1 1742 aa20.84■□□□□ 0.93
SMARCE1-209ENST00000478349 PIAS4Q8N2W9 510 aaPredicted RBP20.83■□□□□ 0.93
SMARCE1-209ENST00000478349 ABCA3Q99758 1704 aa20.82■□□□□ 0.92
SMARCE1-209ENST00000478349 TRPM3Q9HCF6 1732 aaPredicted RBP20.81■□□□□ 0.92
SMARCE1-209ENST00000478349 GLI3P10071 1580 aa20.81■□□□□ 0.92
SMARCE1-209ENST00000478349 PLCH1Q4KWH8 1693 aa20.81■□□□□ 0.92
SMARCE1-209ENST00000478349 CDK19Q9BWU1 502 aa20.81■□□□□ 0.92
SMARCE1-209ENST00000478349 CCDC61Q9Y6R9 512 aa20.81■□□□□ 0.92
SMARCE1-209ENST00000478349 FAM83GA6ND36 823 aa20.8■□□□□ 0.92
SMARCE1-209ENST00000478349 ALS2Q96Q42 1657 aa20.8■□□□□ 0.92
SMARCE1-209ENST00000478349 CENPJQ9HC77 1338 aaPredicted RBP20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms