RNA–Protein interactions for RNA: ENST00000478279.5

APTX-222, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 684 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-222ENST00000478279 VGFO15240 615 aaPredicted RBP16.19■□□□□ 0.18
APTX-222ENST00000478279 PRAG1Q86YV5 1406 aa16.19■□□□□ 0.18
APTX-222ENST00000478279 NPHP3Q7Z494 1330 aa16.19■□□□□ 0.18
APTX-222ENST00000478279 KIF1BO60333 1816 aa16.18■□□□□ 0.18
APTX-222ENST00000478279 GJD4Q96KN9 370 aaPredicted RBP16.18■□□□□ 0.18
APTX-222ENST00000478279 HFM1A2PYH4 1435 aa16.18■□□□□ 0.18
APTX-222ENST00000478279 ESCO1Q5FWF5 840 aa16.16■□□□□ 0.18
APTX-222ENST00000478279 MARF1Q9Y4F3 1742 aaKnown RBP16.15■□□□□ 0.18
APTX-222ENST00000478279 PXDNQ92626 1479 aa16.14■□□□□ 0.17
APTX-222ENST00000478279 RPGRIP1LQ68CZ1 1315 aa16.14■□□□□ 0.17
APTX-222ENST00000478279 FOXO3O43524 673 aa16.13■□□□□ 0.17
APTX-222ENST00000478279 BLMP54132 1417 aaPredicted RBP16.12■□□□□ 0.17
APTX-222ENST00000478279 XPCQ01831 940 aaPredicted RBP16.12■□□□□ 0.17
APTX-222ENST00000478279 UNC5CLQ8IV45 518 aa16.12■□□□□ 0.17
APTX-222ENST00000478279 LRPPRCP42704 1394 aaKnown RBP16.12■□□□□ 0.17
APTX-222ENST00000478279 CDC42BPGQ6DT37 1551 aa16.11■□□□□ 0.17
APTX-222ENST00000478279 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.11■□□□□ 0.17
APTX-222ENST00000478279 RALGAPBQ86X10 1494 aa16.1■□□□□ 0.17
APTX-222ENST00000478279 GLI3P10071 1580 aa16.09■□□□□ 0.17
APTX-222ENST00000478279 DEFB132Q7Z7B7 95 aa16.09■□□□□ 0.17
APTX-222ENST00000478279 SLIT2O94813 1529 aa16.09■□□□□ 0.17
APTX-222ENST00000478279 SF3B2Q13435 895 aaKnown RBP16.07■□□□□ 0.16
APTX-222ENST00000478279 SPATA31A3Q5VYP0 1347 aa16.07■□□□□ 0.16
APTX-222ENST00000478279 NAIPQ13075 1403 aa16.07■□□□□ 0.16
APTX-222ENST00000478279 NUTM2FA1L443 756 aa16.06■□□□□ 0.16
APTX-222ENST00000478279 BRWD3Q6RI45 1802 aa16.05■□□□□ 0.16
APTX-222ENST00000478279 PPLO60437 1756 aa16.05■□□□□ 0.16
APTX-222ENST00000478279 WAPLQ7Z5K2 1190 aa16.05■□□□□ 0.16
APTX-222ENST00000478279 SEPT12Q8IYM1 358 aa16.05■□□□□ 0.16
APTX-222ENST00000478279 TECPR2O15040 1411 aa16.03■□□□□ 0.16
APTX-222ENST00000478279 VPS72Q15906 364 aa16.03■□□□□ 0.16
APTX-222ENST00000478279 KRT28Q7Z3Y7 464 aa16.03■□□□□ 0.16
APTX-222ENST00000478279 STK26Q9P289 416 aa16.03■□□□□ 0.16
APTX-222ENST00000478279 LRP5O75197 1615 aa16.02■□□□□ 0.16
APTX-222ENST00000478279 ONECUT3O60422 494 aaPredicted RBP16.02■□□□□ 0.16
APTX-222ENST00000478279 CCDC144AA2RUR9 1427 aa16.02■□□□□ 0.15
APTX-222ENST00000478279 USP32Q8NFA0 1604 aa16.01■□□□□ 0.15
APTX-222ENST00000478279 ABCC11Q96J66 1382 aa16■□□□□ 0.15
APTX-222ENST00000478279 ADGRF5Q8IZF2 1346 aa16■□□□□ 0.15
APTX-222ENST00000478279 HAP1P54257 671 aaPredicted RBP16■□□□□ 0.15
APTX-222ENST00000478279 KRT27Q7Z3Y8 459 aa16■□□□□ 0.15
APTX-222ENST00000478279 PPARGC1BQ86YN6 1023 aaKnown RBP16■□□□□ 0.15
APTX-222ENST00000478279 SLC4A1APQ9BWU0 796 aaKnown RBP16■□□□□ 0.15
APTX-222ENST00000478279 KIF1AQ12756 1690 aa15.99■□□□□ 0.15
APTX-222ENST00000478279 CCDC9Q9Y3X0 531 aaKnown RBP15.99■□□□□ 0.15
APTX-222ENST00000478279 FMN2Q9NZ56 1722 aa15.99■□□□□ 0.15
APTX-222ENST00000478279 PLEKHH1Q9ULM0 1364 aa15.99■□□□□ 0.15
APTX-222ENST00000478279 PSME1Q06323 249 aa15.98■□□□□ 0.15
APTX-222ENST00000478279 RRBP1Q9P2E9 1410 aaKnown RBP15.98■□□□□ 0.15
APTX-222ENST00000478279 NWD2Q9ULI1 1742 aa15.97■□□□□ 0.15
APTX-222ENST00000478279 TNS3Q68CZ2 1445 aa15.97■□□□□ 0.15
APTX-222ENST00000478279 BAG6P46379 1132 aa15.97■□□□□ 0.15
APTX-222ENST00000478279 TMEM132EQ6IEE7 984 aa15.97■□□□□ 0.15
APTX-222ENST00000478279 CABLES1Q8TDN4 633 aa15.97■□□□□ 0.15
APTX-222ENST00000478279 PSDA5PKW4 1024 aaPredicted RBP15.96■□□□□ 0.15
APTX-222ENST00000478279 HRCP23327 699 aa15.96■□□□□ 0.15
APTX-222ENST00000478279 PHF8Q9UPP1 1060 aa15.96■□□□□ 0.15
APTX-222ENST00000478279 KNDC1Q76NI1 1749 aa15.96■□□□□ 0.15
APTX-222ENST00000478279 RGL3Q3MIN7 710 aa15.95■□□□□ 0.14
APTX-222ENST00000478279 SIRT1Q96EB6 747 aa15.95■□□□□ 0.14
APTX-222ENST00000478279 ANKRD30BQ9BXX2 1392 aa15.95■□□□□ 0.14
APTX-222ENST00000478279 PLCH1Q4KWH8 1693 aa15.95■□□□□ 0.14
APTX-222ENST00000478279 PLEKHG5O94827 1062 aa15.94■□□□□ 0.14
APTX-222ENST00000478279 SBNO1A3KN83 1393 aa15.94■□□□□ 0.14
APTX-222ENST00000478279 FAM83GA6ND36 823 aa15.93■□□□□ 0.14
APTX-222ENST00000478279 LMOD2Q6P5Q4 547 aa15.93■□□□□ 0.14
APTX-222ENST00000478279 YTHDC2Q9H6S0 1430 aaKnown RBP15.93■□□□□ 0.14
APTX-222ENST00000478279 RGPD8O14715 1765 aaPredicted RBP15.92■□□□□ 0.14
APTX-222ENST00000478279 ARHGEF10O15013 1369 aa15.92■□□□□ 0.14
APTX-222ENST00000478279 A0A0G2JS52 829 aa15.92■□□□□ 0.14
APTX-222ENST00000478279 MYT1Q01538 1121 aa15.92■□□□□ 0.14
APTX-222ENST00000478279 SPATA31E1Q6ZUB1 1445 aa15.92■□□□□ 0.14
APTX-222ENST00000478279 FAM98CQ17RN3 349 aaKnown RBP15.91■□□□□ 0.14
APTX-222ENST00000478279 PIK3C2GO75747 1445 aa15.91■□□□□ 0.14
APTX-222ENST00000478279 IFT172Q9UG01 1749 aa15.91■□□□□ 0.14
APTX-222ENST00000478279 NRXN1Q9ULB1 1477 aa15.91■□□□□ 0.14
APTX-222ENST00000478279 EN1Q05925 392 aaPredicted RBP15.9■□□□□ 0.14
APTX-222ENST00000478279 ABCA3Q99758 1704 aa15.9■□□□□ 0.14
APTX-222ENST00000478279 BTG4Q9NY30 223 aa15.88■□□□□ 0.13
APTX-222ENST00000478279 R3HDM1Q15032 1099 aaKnown RBP15.87■□□□□ 0.13
APTX-222ENST00000478279 C14orf93Q9H972 538 aaKnown RBP15.87■□□□□ 0.13
APTX-222ENST00000478279 RGPD1P0DJD0 1748 aa15.86■□□□□ 0.13
APTX-222ENST00000478279 NRAPQ86VF7 1730 aa15.86■□□□□ 0.13
APTX-222ENST00000478279 PMFBP1Q8TBY8 1022 aa15.86■□□□□ 0.13
APTX-222ENST00000478279 DHX57Q6P158 1386 aaKnown RBP15.86■□□□□ 0.13
APTX-222ENST00000478279 DISP2A7MBM2 1401 aa15.85■□□□□ 0.13
APTX-222ENST00000478279 SAFB2Q14151 953 aaKnown RBP eCLIP15.84■□□□□ 0.13
APTX-222ENST00000478279 FAM182BQ5T319 152 aa15.84■□□□□ 0.13
APTX-222ENST00000478279 PRAM1Q96QH2 718 aa15.84■□□□□ 0.13
APTX-222ENST00000478279 SPATA31A5Q5VU36 1347 aa15.84■□□□□ 0.13
APTX-222ENST00000478279 SPATA31A7Q8IWB4 1347 aa15.84■□□□□ 0.13
APTX-222ENST00000478279 COL14A1Q05707 1796 aaKnown RBP15.83■□□□□ 0.12
APTX-222ENST00000478279 CFAP70Q5T0N1 1121 aa15.83■□□□□ 0.12
APTX-222ENST00000478279 ANKARQ7Z5J8 1434 aa15.83■□□□□ 0.12
APTX-222ENST00000478279 EZH2Q15910 746 aaKnown RBP15.82■□□□□ 0.12
APTX-222ENST00000478279 MPHOSPH9Q99550 1183 aa15.82■□□□□ 0.12
APTX-222ENST00000478279 POGKQ9P215 609 aa15.81■□□□□ 0.12
APTX-222ENST00000478279 TNS1Q9HBL0 1735 aaKnown RBP15.8■□□□□ 0.12
APTX-222ENST00000478279 TRPM3Q9HCF6 1732 aaPredicted RBP15.8■□□□□ 0.12
APTX-222ENST00000478279 GPRASP1Q5JY77 1395 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms