RNA–Protein interactions for RNA: ENST00000478238.1

SYCP3-205, Transcript of synaptonemal complex protein 3, humanhuman

TSL 3

Gene SYCP3, Length 665 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP3-205ENST00000478238 RPIAP49247 311 aa11.88□□□□□ -0.51
SYCP3-205ENST00000478238 GDF9O60383 454 aa11.87□□□□□ -0.51
SYCP3-205ENST00000478238 TNFRSF10AO00220 468 aa11.86□□□□□ -0.51
SYCP3-205ENST00000478238 GUCA2AQ02747 115 aa11.85□□□□□ -0.51
SYCP3-205ENST00000478238 NUTM1Q86Y26 1132 aa11.85□□□□□ -0.51
SYCP3-205ENST00000478238 USB1Q9BQ65 265 aaKnown RBP11.85□□□□□ -0.51
SYCP3-205ENST00000478238 SSTR3P32745 418 aaPredicted RBP11.84□□□□□ -0.51
SYCP3-205ENST00000478238 MMP16P51512 607 aa11.84□□□□□ -0.51
SYCP3-205ENST00000478238 TTLL12Q14166 644 aaPredicted RBP11.84□□□□□ -0.51
SYCP3-205ENST00000478238 AMHR2Q16671 573 aa11.84□□□□□ -0.51
SYCP3-205ENST00000478238 CD2BP2O95400 341 aaKnown RBP11.82□□□□□ -0.52
SYCP3-205ENST00000478238 PKD2L1Q9P0L9 805 aa11.82□□□□□ -0.52
SYCP3-205ENST00000478238 FOXC1Q12948 553 aa11.81□□□□□ -0.52
SYCP3-205ENST00000478238 PKDCCQ504Y2 493 aa11.81□□□□□ -0.52
SYCP3-205ENST00000478238 DGAT1O75907 488 aa11.8□□□□□ -0.52
SYCP3-205ENST00000478238 DXOO77932 396 aaKnown RBP11.8□□□□□ -0.52
SYCP3-205ENST00000478238 ZBTB24O43167 697 aaPredicted RBP11.79□□□□□ -0.52
SYCP3-205ENST00000478238 GIGYF2Q6Y7W6 1299 aaKnown RBP11.79□□□□□ -0.52
SYCP3-205ENST00000478238 FAM187AA6NFU0 413 aa11.78□□□□□ -0.52
SYCP3-205ENST00000478238 SYMPKQ92797 1274 aaKnown RBP11.78□□□□□ -0.52
SYCP3-205ENST00000478238 SPIRE2Q8WWL2 714 aa11.77□□□□□ -0.53
SYCP3-205ENST00000478238 FDX1P10109 184 aa11.76□□□□□ -0.53
SYCP3-205ENST00000478238 TRIM66O15016 1216 aa11.75□□□□□ -0.53
SYCP3-205ENST00000478238 MYT1Q01538 1121 aa11.75□□□□□ -0.53
SYCP3-205ENST00000478238 PCDHGC3Q9UN70 934 aa11.75□□□□□ -0.53
SYCP3-205ENST00000478238 TRIM32Q13049 653 aa11.74□□□□□ -0.53
SYCP3-205ENST00000478238 RETREG3Q86VR2 466 aa11.74□□□□□ -0.53
SYCP3-205ENST00000478238 JUNDP17535 347 aa11.73□□□□□ -0.53
SYCP3-205ENST00000478238 PARP9Q8IXQ6 854 aa11.73□□□□□ -0.53
SYCP3-205ENST00000478238 CCDC24Q8N4L8 307 aa11.73□□□□□ -0.53
SYCP3-205ENST00000478238 AK7Q96M32 723 aa11.73□□□□□ -0.53
SYCP3-205ENST00000478238 NDUFV2P19404 249 aa11.72□□□□□ -0.53
SYCP3-205ENST00000478238 BEGAINQ9BUH8 593 aa11.72□□□□□ -0.53
SYCP3-205ENST00000478238 MOXD2PA6NHM9 499 aa11.71□□□□□ -0.53
SYCP3-205ENST00000478238 C6orf229H3BNL8 230 aa11.71□□□□□ -0.53
SYCP3-205ENST00000478238 CYP4X1Q8N118 509 aa11.71□□□□□ -0.53
SYCP3-205ENST00000478238 TOR4AQ9NXH8 423 aa11.71□□□□□ -0.53
SYCP3-205ENST00000478238 ZNF787Q6DD87 383 aa11.7□□□□□ -0.54
SYCP3-205ENST00000478238 WNT7AO00755 349 aa11.68□□□□□ -0.54
SYCP3-205ENST00000478238 MS4A1P11836 297 aa11.68□□□□□ -0.54
SYCP3-205ENST00000478238 NUDT12Q9BQG2 462 aa11.66□□□□□ -0.54
SYCP3-205ENST00000478238 TBC1D2Q9BYX2 928 aa11.66□□□□□ -0.54
SYCP3-205ENST00000478238 ST8SIA5O15466 376 aa11.65□□□□□ -0.54
SYCP3-205ENST00000478238 TTC24A2A3L6 582 aaPredicted RBP11.64□□□□□ -0.55
SYCP3-205ENST00000478238 DIXDC1Q155Q3 683 aa11.64□□□□□ -0.55
SYCP3-205ENST00000478238 AAASQ9NRG9 546 aa11.64□□□□□ -0.55
SYCP3-205ENST00000478238 SKOR1P84550 965 aa11.63□□□□□ -0.55
SYCP3-205ENST00000478238 PDE4DQ08499 809 aa11.63□□□□□ -0.55
SYCP3-205ENST00000478238 MTMR2Q13614 643 aa11.63□□□□□ -0.55
SYCP3-205ENST00000478238 RSBN1LQ6PCB5 846 aaPredicted RBP11.63□□□□□ -0.55
SYCP3-205ENST00000478238 MRGPRX2Q96LB1 330 aa11.63□□□□□ -0.55
SYCP3-205ENST00000478238 SLC24A3Q9HC58 644 aa11.63□□□□□ -0.55
SYCP3-205ENST00000478238 AVPP01185 164 aa11.62□□□□□ -0.55
SYCP3-205ENST00000478238 GJA5P36382 358 aa11.62□□□□□ -0.55
SYCP3-205ENST00000478238 WNT7BP56706 349 aa11.62□□□□□ -0.55
SYCP3-205ENST00000478238 PTCRAQ6ISU1 281 aaPredicted RBP11.62□□□□□ -0.55
SYCP3-205ENST00000478238 SNIP1Q8TAD8 396 aaKnown RBP11.62□□□□□ -0.55
SYCP3-205ENST00000478238 PRR7Q8TB68 274 aa11.62□□□□□ -0.55
SYCP3-205ENST00000478238 SPDYE5A6NIY4 337 aa11.61□□□□□ -0.55
SYCP3-205ENST00000478238 CCNYL3P0C7X3 344 aa11.61□□□□□ -0.55
SYCP3-205ENST00000478238 PTPRNQ16849 979 aa11.6□□□□□ -0.55
SYCP3-205ENST00000478238 RC3H1Q5TC82 1133 aaKnown RBP11.6□□□□□ -0.55
SYCP3-205ENST00000478238 CRIPAKQ8N1N5 446 aa11.6□□□□□ -0.55
SYCP3-205ENST00000478238 POTECB2RU33 542 aa11.59□□□□□ -0.55
SYCP3-205ENST00000478238 SMPD1P17405 629 aa11.59□□□□□ -0.55
SYCP3-205ENST00000478238 PCDHB15Q9Y5E8 787 aa11.59□□□□□ -0.55
SYCP3-205ENST00000478238 SPTLC1O15269 473 aa11.58□□□□□ -0.56
SYCP3-205ENST00000478238 DESI1Q6ICB0 168 aa11.57□□□□□ -0.56
SYCP3-205ENST00000478238 J3QL48 77 aa11.56□□□□□ -0.56
SYCP3-205ENST00000478238 AXIN1O15169 862 aa11.56□□□□□ -0.56
SYCP3-205ENST00000478238 CTC1Q2NKJ3 1217 aa11.56□□□□□ -0.56
SYCP3-205ENST00000478238 RIC3Q7Z5B4 369 aa11.56□□□□□ -0.56
SYCP3-205ENST00000478238 EVA1BQ9NVM1 165 aa11.56□□□□□ -0.56
SYCP3-205ENST00000478238 SMCPP49901 116 aaPredicted RBP11.55□□□□□ -0.56
SYCP3-205ENST00000478238 DACH1Q9UI36 760 aa11.55□□□□□ -0.56
SYCP3-205ENST00000478238 HRCP23327 699 aa11.54□□□□□ -0.56
SYCP3-205ENST00000478238 KCNH2Q12809 1159 aa11.54□□□□□ -0.56
SYCP3-205ENST00000478238 UNC93B1Q9H1C4 597 aa11.54□□□□□ -0.56
SYCP3-205ENST00000478238 ZBTB3Q9H5J0 574 aa11.54□□□□□ -0.56
SYCP3-205ENST00000478238 CFAP99D6REC4 459 aa11.53□□□□□ -0.56
SYCP3-205ENST00000478238 ZNF775Q96BV0 537 aaPredicted RBP11.53□□□□□ -0.56
SYCP3-205ENST00000478238 SH3BP2P78314 561 aa11.52□□□□□ -0.57
SYCP3-205ENST00000478238 PRPF38BQ5VTL8 546 aaKnown RBP11.52□□□□□ -0.57
SYCP3-205ENST00000478238 MYSM1Q5VVJ2 828 aa11.52□□□□□ -0.57
SYCP3-205ENST00000478238 CSPP1Q1MSJ5 1256 aa11.51□□□□□ -0.57
SYCP3-205ENST00000478238 LYPD8Q6UX82 237 aa11.51□□□□□ -0.57
SYCP3-205ENST00000478238 EHBP1Q8NDI1 1231 aa11.51□□□□□ -0.57
SYCP3-205ENST00000478238 CABLES1Q8TDN4 633 aa11.51□□□□□ -0.57
SYCP3-205ENST00000478238 LIMD1Q9UGP4 676 aa11.51□□□□□ -0.57
SYCP3-205ENST00000478238 SIAH2O43255 324 aa11.49□□□□□ -0.57
SYCP3-205ENST00000478238 ALDH1A1P00352 501 aa11.49□□□□□ -0.57
SYCP3-205ENST00000478238 LINC01559Q495D7 138 aa11.49□□□□□ -0.57
SYCP3-205ENST00000478238 BAP1Q92560 729 aa11.49□□□□□ -0.57
SYCP3-205ENST00000478238 HPS1Q92902 700 aa11.49□□□□□ -0.57
SYCP3-205ENST00000478238 BCANQ96GW7 911 aa11.49□□□□□ -0.57
SYCP3-205ENST00000478238 CTHP32929 405 aa11.47□□□□□ -0.57
SYCP3-205ENST00000478238 TUSC1Q2TAM9 212 aa11.47□□□□□ -0.57
SYCP3-205ENST00000478238 GMPR2Q9P2T1 348 aaKnown RBP11.47□□□□□ -0.57
SYCP3-205ENST00000478238 QPCTQ16769 361 aa11.46□□□□□ -0.57
SYCP3-205ENST00000478238 ZNF511Q8NB15 262 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms