RNA–Protein interactions for RNA: ENST00000478111.5

TRIM13-208, Transcript of tripartite motif containing 13, humanhuman

TSL 2

Gene TRIM13, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-208ENST00000478111 UPF1Q92900 1129 aaKnown RBP eCLIP24.96■■□□□ 1.59
TRIM13-208ENST00000478111 C8orf37Q96NL8 207 aa24.96■■□□□ 1.59
TRIM13-208ENST00000478111 KNDC1Q76NI1 1749 aa24.94■■□□□ 1.58
TRIM13-208ENST00000478111 PIK3C2GO75747 1445 aa24.94■■□□□ 1.58
TRIM13-208ENST00000478111 LRPPRCP42704 1394 aaKnown RBP24.93■■□□□ 1.58
TRIM13-208ENST00000478111 WAPLQ7Z5K2 1190 aa24.93■■□□□ 1.58
TRIM13-208ENST00000478111 TMEM132EQ6IEE7 984 aa24.92■■□□□ 1.58
TRIM13-208ENST00000478111 STK26Q9P289 416 aa24.92■■□□□ 1.58
TRIM13-208ENST00000478111 COL22A1Q8NFW1 1626 aaPredicted RBP24.92■■□□□ 1.58
TRIM13-208ENST00000478111 ABCC11Q96J66 1382 aa24.92■■□□□ 1.58
TRIM13-208ENST00000478111 ADAMTS2O95450 1211 aa24.91■■□□□ 1.58
TRIM13-208ENST00000478111 QTRT2Q9H974 415 aaKnown RBP24.91■■□□□ 1.58
TRIM13-208ENST00000478111 PLEKHH1Q9ULM0 1364 aa24.9■■□□□ 1.58
TRIM13-208ENST00000478111 ESCO1Q5FWF5 840 aa24.89■■□□□ 1.58
TRIM13-208ENST00000478111 PXDNQ92626 1479 aa24.89■■□□□ 1.57
TRIM13-208ENST00000478111 RBM6P78332 1123 aaKnown RBP24.88■■□□□ 1.57
TRIM13-208ENST00000478111 NGLY1Q96IV0 654 aa24.88■■□□□ 1.57
TRIM13-208ENST00000478111 RGS12O14924 1447 aa24.87■■□□□ 1.57
TRIM13-208ENST00000478111 NPHP3Q7Z494 1330 aa24.86■■□□□ 1.57
TRIM13-208ENST00000478111 YTHDC2Q9H6S0 1430 aaKnown RBP24.86■■□□□ 1.57
TRIM13-208ENST00000478111 FMN2Q9NZ56 1722 aa24.86■■□□□ 1.57
TRIM13-208ENST00000478111 NRXN1Q9ULB1 1477 aa24.85■■□□□ 1.57
TRIM13-208ENST00000478111 ACIN1Q9UKV3 1341 aaKnown RBP24.85■■□□□ 1.57
TRIM13-208ENST00000478111 MYOM2P54296 1465 aa24.84■■□□□ 1.57
TRIM13-208ENST00000478111 FOXO3O43524 673 aa24.84■■□□□ 1.57
TRIM13-208ENST00000478111 C14orf93Q9H972 538 aaKnown RBP24.84■■□□□ 1.57
TRIM13-208ENST00000478111 NUTM2FA1L443 756 aa24.83■■□□□ 1.57
TRIM13-208ENST00000478111 FNBP4Q8N3X1 1017 aaPredicted RBP24.83■■□□□ 1.57
TRIM13-208ENST00000478111 XPCQ01831 940 aaPredicted RBP24.82■■□□□ 1.56
TRIM13-208ENST00000478111 SIRT1Q96EB6 747 aa24.82■■□□□ 1.56
TRIM13-208ENST00000478111 MARF1Q9Y4F3 1742 aaKnown RBP24.82■■□□□ 1.56
TRIM13-208ENST00000478111 RGPD8O14715 1765 aaPredicted RBP24.81■■□□□ 1.56
TRIM13-208ENST00000478111 USP21Q9UK80 565 aa24.81■■□□□ 1.56
TRIM13-208ENST00000478111 CFAP70Q5T0N1 1121 aa24.79■■□□□ 1.56
TRIM13-208ENST00000478111 RAB3GAP2Q9H2M9 1393 aa24.79■■□□□ 1.56
TRIM13-208ENST00000478111 KIF1AQ12756 1690 aa24.77■■□□□ 1.56
TRIM13-208ENST00000478111 ATRNO75882 1429 aa24.77■■□□□ 1.56
TRIM13-208ENST00000478111 TRPC5Q9UL62 973 aaPredicted RBP24.76■■□□□ 1.55
TRIM13-208ENST00000478111 EP400Q96L91 3159 aa24.75■■□□□ 1.55
TRIM13-208ENST00000478111 BCL9LQ86UU0 1499 aa24.75■■□□□ 1.55
TRIM13-208ENST00000478111 DHX57Q6P158 1386 aaKnown RBP24.74■■□□□ 1.55
TRIM13-208ENST00000478111 SPATA31A3Q5VYP0 1347 aa24.72■■□□□ 1.55
TRIM13-208ENST00000478111 ADGRB1O14514 1584 aa24.69■■□□□ 1.54
TRIM13-208ENST00000478111 KRT28Q7Z3Y7 464 aa24.69■■□□□ 1.54
TRIM13-208ENST00000478111 PRAM1Q96QH2 718 aa24.69■■□□□ 1.54
TRIM13-208ENST00000478111 DLC1Q96QB1 1528 aa24.69■■□□□ 1.54
TRIM13-208ENST00000478111 PHF8Q9UPP1 1060 aa24.68■■□□□ 1.54
TRIM13-208ENST00000478111 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.67■■□□□ 1.54
TRIM13-208ENST00000478111 USP32Q8NFA0 1604 aa24.67■■□□□ 1.54
TRIM13-208ENST00000478111 SAFB2Q14151 953 aaKnown RBP eCLIP24.66■■□□□ 1.54
TRIM13-208ENST00000478111 SLIT2O94813 1529 aa24.65■■□□□ 1.54
TRIM13-208ENST00000478111 ATAD2Q6PL18 1390 aa24.65■■□□□ 1.54
TRIM13-208ENST00000478111 SRCAPQ6ZRS2 3230 aa24.64■■□□□ 1.53
TRIM13-208ENST00000478111 ADGRB2O60241 1585 aa24.63■■□□□ 1.53
TRIM13-208ENST00000478111 TNS3Q68CZ2 1445 aa24.62■■□□□ 1.53
TRIM13-208ENST00000478111 GJD4Q96KN9 370 aaPredicted RBP24.62■■□□□ 1.53
TRIM13-208ENST00000478111 POGKQ9P215 609 aa24.61■■□□□ 1.53
TRIM13-208ENST00000478111 GLI3P10071 1580 aa24.6■■□□□ 1.53
TRIM13-208ENST00000478111 SBNO1A3KN83 1393 aa24.6■■□□□ 1.53
TRIM13-208ENST00000478111 UNC5CLQ8IV45 518 aa24.6■■□□□ 1.53
TRIM13-208ENST00000478111 ABCA3Q99758 1704 aa24.6■■□□□ 1.53
TRIM13-208ENST00000478111 ANKARQ7Z5J8 1434 aa24.6■■□□□ 1.53
TRIM13-208ENST00000478111 HRCP23327 699 aa24.59■■□□□ 1.53
TRIM13-208ENST00000478111 PSME1Q06323 249 aa24.59■■□□□ 1.53
TRIM13-208ENST00000478111 TRAK1Q9UPV9 953 aa24.59■■□□□ 1.53
TRIM13-208ENST00000478111 CABLES1Q8TDN4 633 aa24.58■■□□□ 1.53
TRIM13-208ENST00000478111 DCAF11Q8TEB1 546 aa24.58■■□□□ 1.53
TRIM13-208ENST00000478111 KDM2AQ9Y2K7 1162 aa24.58■■□□□ 1.53
TRIM13-208ENST00000478111 PMFBP1Q8TBY8 1022 aa24.57■■□□□ 1.52
TRIM13-208ENST00000478111 RALGAPBQ86X10 1494 aa24.57■■□□□ 1.52
TRIM13-208ENST00000478111 TRPM3Q9HCF6 1732 aaPredicted RBP24.56■■□□□ 1.52
TRIM13-208ENST00000478111 HIRIP3Q9BW71 556 aaPredicted RBP24.55■■□□□ 1.52
TRIM13-208ENST00000478111 PLCH1Q4KWH8 1693 aa24.55■■□□□ 1.52
TRIM13-208ENST00000478111 BRWD3Q6RI45 1802 aa24.54■■□□□ 1.52
TRIM13-208ENST00000478111 NWD2Q9ULI1 1742 aa24.54■■□□□ 1.52
TRIM13-208ENST00000478111 PRR36Q9H6K5 1346 aa24.54■■□□□ 1.52
TRIM13-208ENST00000478111 STAC3Q96MF2 364 aa24.53■■□□□ 1.52
TRIM13-208ENST00000478111 MINK1Q8N4C8 1332 aaPredicted RBP24.53■■□□□ 1.52
TRIM13-208ENST00000478111 ARHGEF10O15013 1369 aa24.53■■□□□ 1.52
TRIM13-208ENST00000478111 ALS2Q96Q42 1657 aa24.52■■□□□ 1.52
TRIM13-208ENST00000478111 LMOD2Q6P5Q4 547 aa24.51■■□□□ 1.51
TRIM13-208ENST00000478111 TULP4Q9NRJ4 1543 aa24.51■■□□□ 1.51
TRIM13-208ENST00000478111 ARHGEF28Q8N1W1 1705 aaKnown RBP24.5■■□□□ 1.51
TRIM13-208ENST00000478111 WASLO00401 505 aaPredicted RBP24.5■■□□□ 1.51
TRIM13-208ENST00000478111 PLEKHG5O94827 1062 aa24.5■■□□□ 1.51
TRIM13-208ENST00000478111 HAP1P54257 671 aaPredicted RBP24.5■■□□□ 1.51
TRIM13-208ENST00000478111 VPS72Q15906 364 aa24.48■■□□□ 1.51
TRIM13-208ENST00000478111 CCDC125Q86Z20 511 aa24.48■■□□□ 1.51
TRIM13-208ENST00000478111 FAM83GA6ND36 823 aa24.47■■□□□ 1.51
TRIM13-208ENST00000478111 EIF3AQ14152 1382 aaKnown RBP24.46■■□□□ 1.51
TRIM13-208ENST00000478111 ONECUT3O60422 494 aaPredicted RBP24.46■■□□□ 1.51
TRIM13-208ENST00000478111 NRAPQ86VF7 1730 aa24.45■■□□□ 1.5
TRIM13-208ENST00000478111 CRYBG1Q9Y4K1 1723 aa24.45■■□□□ 1.5
TRIM13-208ENST00000478111 GPRASP1Q5JY77 1395 aa24.43■■□□□ 1.5
TRIM13-208ENST00000478111 SEPT12Q8IYM1 358 aa24.43■■□□□ 1.5
TRIM13-208ENST00000478111 ITSN1Q15811 1721 aa24.41■■□□□ 1.5
TRIM13-208ENST00000478111 ATP7BP35670 1465 aa24.41■■□□□ 1.5
TRIM13-208ENST00000478111 KIAA1210Q9ULL0 1709 aa24.41■■□□□ 1.5
TRIM13-208ENST00000478111 COL14A1Q05707 1796 aaKnown RBP24.4■■□□□ 1.5
TRIM13-208ENST00000478111 NGDNQ8NEJ9 315 aaKnown RBP24.39■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms