RNA–Protein interactions for RNA: ENST00000477772.1

COL11A2-206, Transcript of collagen type XI alpha 2 chain, humanhuman

TSL 2

Gene COL11A2, Length 1,984 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-206ENST00000477772 FAM135BQ49AJ0 1406 aa22.48■■□□□ 1.19
COL11A2-206ENST00000477772 USP47Q96K76 1375 aa22.47■■□□□ 1.19
COL11A2-206ENST00000477772 PROSER2Q86WR7 435 aaPredicted RBP22.47■■□□□ 1.19
COL11A2-206ENST00000477772 LRRC7Q96NW7 1537 aa22.46■■□□□ 1.19
COL11A2-206ENST00000477772 XIRP1Q702N8 1843 aaKnown RBP22.46■■□□□ 1.19
COL11A2-206ENST00000477772 ANP32CO43423 234 aa22.45■■□□□ 1.18
COL11A2-206ENST00000477772 SAFB2Q14151 953 aaKnown RBP eCLIP22.45■■□□□ 1.18
COL11A2-206ENST00000477772 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.44■■□□□ 1.18
COL11A2-206ENST00000477772 POGKQ9P215 609 aa22.43■■□□□ 1.18
COL11A2-206ENST00000477772 TMEM94Q12767 1356 aa22.43■■□□□ 1.18
COL11A2-206ENST00000477772 ST20-MTHFSA0A0A6YYL1 179 aa22.42■■□□□ 1.18
COL11A2-206ENST00000477772 CENPJQ9HC77 1338 aaPredicted RBP22.42■■□□□ 1.18
COL11A2-206ENST00000477772 EIF3AQ14152 1382 aaKnown RBP22.42■■□□□ 1.18
COL11A2-206ENST00000477772 QRICH2Q9H0J4 1663 aa22.41■■□□□ 1.18
COL11A2-206ENST00000477772 NALCNQ8IZF0 1738 aa22.4■■□□□ 1.18
COL11A2-206ENST00000477772 EIF4G2P78344 907 aaKnown RBP eCLIP22.4■■□□□ 1.18
COL11A2-206ENST00000477772 HSPA5P11021 654 aaKnown RBP22.39■■□□□ 1.18
COL11A2-206ENST00000477772 HIRIP3Q9BW71 556 aaPredicted RBP22.39■■□□□ 1.17
COL11A2-206ENST00000477772 MINK1Q8N4C8 1332 aaPredicted RBP22.37■■□□□ 1.17
COL11A2-206ENST00000477772 TESK2Q96S53 571 aa22.37■■□□□ 1.17
COL11A2-206ENST00000477772 NCOA3Q9Y6Q9 1424 aa22.37■■□□□ 1.17
COL11A2-206ENST00000477772 ADGRL3Q9HAR2 1447 aa22.36■■□□□ 1.17
COL11A2-206ENST00000477772 C14orf37Q86TY3 774 aa22.34■■□□□ 1.17
COL11A2-206ENST00000477772 SUPT16HQ9Y5B9 1047 aaKnown RBP22.34■■□□□ 1.17
COL11A2-206ENST00000477772 SBNO2Q9Y2G9 1366 aa22.33■■□□□ 1.16
COL11A2-206ENST00000477772 ADGRB2O60241 1585 aa22.33■■□□□ 1.16
COL11A2-206ENST00000477772 AMER1Q5JTC6 1135 aaPredicted RBP22.32■■□□□ 1.16
COL11A2-206ENST00000477772 C19orf44Q9H6X5 657 aa22.32■■□□□ 1.16
COL11A2-206ENST00000477772 TULP4Q9NRJ4 1543 aa22.3■■□□□ 1.16
COL11A2-206ENST00000477772 CDC42BPGQ6DT37 1551 aa22.29■■□□□ 1.16
COL11A2-206ENST00000477772 MSH6P52701 1360 aa22.29■■□□□ 1.16
COL11A2-206ENST00000477772 WASLO00401 505 aaPredicted RBP22.27■■□□□ 1.16
COL11A2-206ENST00000477772 CERKQ8TCT0 537 aa22.27■■□□□ 1.16
COL11A2-206ENST00000477772 DISP3Q9P2K9 1392 aa22.26■■□□□ 1.15
COL11A2-206ENST00000477772 CDK19Q9BWU1 502 aa22.26■■□□□ 1.15
COL11A2-206ENST00000477772 DCCP43146 1447 aa22.26■■□□□ 1.15
COL11A2-206ENST00000477772 FMN2Q9NZ56 1722 aa22.25■■□□□ 1.15
COL11A2-206ENST00000477772 C11orf95C9JLR9 678 aaPredicted RBP22.25■■□□□ 1.15
COL11A2-206ENST00000477772 WASHC2AQ641Q2 1341 aa22.24■■□□□ 1.15
COL11A2-206ENST00000477772 EVC2Q86UK5 1308 aa22.24■■□□□ 1.15
COL11A2-206ENST00000477772 NUTM2FA1L443 756 aa22.23■■□□□ 1.15
COL11A2-206ENST00000477772 IQSEC2Q5JU85 1478 aa22.23■■□□□ 1.15
COL11A2-206ENST00000477772 ATF3P18847 181 aa22.23■■□□□ 1.15
COL11A2-206ENST00000477772 CABP2Q9NPB3 220 aa22.23■■□□□ 1.15
COL11A2-206ENST00000477772 USP32Q8NFA0 1604 aa22.23■■□□□ 1.15
COL11A2-206ENST00000477772 RGPD8O14715 1765 aaPredicted RBP22.22■■□□□ 1.15
COL11A2-206ENST00000477772 TMF1P82094 1093 aa22.22■■□□□ 1.15
COL11A2-206ENST00000477772 CADPS2Q86UW7 1296 aa22.22■■□□□ 1.15
COL11A2-206ENST00000477772 PRR36Q9H6K5 1346 aa22.21■■□□□ 1.15
COL11A2-206ENST00000477772 MST1RQ04912 1400 aa22.2■■□□□ 1.14
COL11A2-206ENST00000477772 SRPK2P78362 688 aaKnown RBP22.2■■□□□ 1.14
COL11A2-206ENST00000477772 ATP7BP35670 1465 aa22.19■■□□□ 1.14
COL11A2-206ENST00000477772 NUDT16Q96DE0 195 aaKnown RBP22.17■■□□□ 1.14
COL11A2-206ENST00000477772 C1orf167Q5SNV9 1468 aa22.17■■□□□ 1.14
COL11A2-206ENST00000477772 SLAIN2Q9P270 581 aa22.16■■□□□ 1.14
COL11A2-206ENST00000477772 CCDC7Q96M83 1385 aa22.16■■□□□ 1.14
COL11A2-206ENST00000477772 ANKARQ7Z5J8 1434 aa22.16■■□□□ 1.14
COL11A2-206ENST00000477772 PUS7Q96PZ0 661 aaKnown RBP22.14■■□□□ 1.14
COL11A2-206ENST00000477772 TOPAZ1Q8N9V7 1692 aa22.14■■□□□ 1.14
COL11A2-206ENST00000477772 KIF7Q2M1P5 1343 aa22.14■■□□□ 1.13
COL11A2-206ENST00000477772 ORAI2Q96SN7 254 aa22.13■■□□□ 1.13
COL11A2-206ENST00000477772 CCDC61Q9Y6R9 512 aa22.12■■□□□ 1.13
COL11A2-206ENST00000477772 UBAP1LF5GYI3 381 aa22.12■■□□□ 1.13
COL11A2-206ENST00000477772 CDCA8Q53HL2 280 aa22.12■■□□□ 1.13
COL11A2-206ENST00000477772 ATAD2Q6PL18 1390 aa22.11■■□□□ 1.13
COL11A2-206ENST00000477772 ITSN1Q15811 1721 aa22.11■■□□□ 1.13
COL11A2-206ENST00000477772 TOM1O60784 492 aa22.11■■□□□ 1.13
COL11A2-206ENST00000477772 ESCO1Q5FWF5 840 aa22.1■■□□□ 1.13
COL11A2-206ENST00000477772 POLR3GLQ9BT43 218 aa22.1■■□□□ 1.13
COL11A2-206ENST00000477772 MYOM1P52179 1685 aa22.1■■□□□ 1.13
COL11A2-206ENST00000477772 PPIP5K1Q6PFW1 1433 aa22.09■■□□□ 1.13
COL11A2-206ENST00000477772 CABP1Q9NZU7 370 aa22.09■■□□□ 1.13
COL11A2-206ENST00000477772 BRINP3Q76B58 766 aa22.08■■□□□ 1.13
COL11A2-206ENST00000477772 PMFBP1Q8TBY8 1022 aa22.08■■□□□ 1.12
COL11A2-206ENST00000477772 SLC12A5Q9H2X9 1139 aa22.08■■□□□ 1.12
COL11A2-206ENST00000477772 ROBO1Q9Y6N7 1651 aa22.07■■□□□ 1.12
COL11A2-206ENST00000477772 TMC1Q8TDI8 760 aa22.07■■□□□ 1.12
COL11A2-206ENST00000477772 PHF8Q9UPP1 1060 aa22.07■■□□□ 1.12
COL11A2-206ENST00000477772 PLEKHG3A1L390 1219 aa22.06■■□□□ 1.12
COL11A2-206ENST00000477772 PIP4K2BP78356 416 aa22.05■■□□□ 1.12
COL11A2-206ENST00000477772 NEFLP07196 543 aa22.05■■□□□ 1.12
COL11A2-206ENST00000477772 CD163L1Q9NR16 1453 aa22.04■■□□□ 1.12
COL11A2-206ENST00000477772 KIF1AQ12756 1690 aa22.03■■□□□ 1.12
COL11A2-206ENST00000477772 ACEP12821 1306 aa22.03■■□□□ 1.12
COL11A2-206ENST00000477772 DDX17Q92841 729 aaKnown RBP22.03■■□□□ 1.12
COL11A2-206ENST00000477772 FOXO3O43524 673 aa22.02■■□□□ 1.12
COL11A2-206ENST00000477772 POLR3AO14802 1390 aaPredicted RBP22.02■■□□□ 1.12
COL11A2-206ENST00000477772 NINLQ9Y2I6 1382 aa22.01■■□□□ 1.11
COL11A2-206ENST00000477772 CPSF1Q10570 1443 aaKnown RBP22■■□□□ 1.11
COL11A2-206ENST00000477772 NGDNQ8NEJ9 315 aaKnown RBP22■■□□□ 1.11
COL11A2-206ENST00000477772 AKAP12Q02952 1782 aa22■■□□□ 1.11
COL11A2-206ENST00000477772 FKBP8Q14318 412 aa21.99■■□□□ 1.11
COL11A2-206ENST00000477772 PRKRIP1Q9H875 184 aaPredicted RBP21.99■■□□□ 1.11
COL11A2-206ENST00000477772 NHSL1Q5SYE7 1610 aa21.99■■□□□ 1.11
COL11A2-206ENST00000477772 A0A1W2PP64 1363 aa21.98■■□□□ 1.11
COL11A2-206ENST00000477772 ANKRD36BQ8N2N9 1353 aa21.97■■□□□ 1.11
COL11A2-206ENST00000477772 XPCQ01831 940 aaPredicted RBP21.97■■□□□ 1.11
COL11A2-206ENST00000477772 MON2Q7Z3U7 1717 aa21.95■■□□□ 1.11
COL11A2-206ENST00000477772 HNRNPUQ00839 825 aaKnown RBP eCLIP21.95■■□□□ 1.1
COL11A2-206ENST00000477772 PANK3Q9H999 370 aa21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms