RNA–Protein interactions for RNA: ENST00000477626.5

PRPF39-203, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-203ENST00000477626 MLECQ14165 292 aa16.83■□□□□ 0.28
PRPF39-203ENST00000477626 CARD14Q9BXL6 1004 aa16.83■□□□□ 0.28
PRPF39-203ENST00000477626 LTKP29376 864 aa16.82■□□□□ 0.28
PRPF39-203ENST00000477626 BRD4O60885 1362 aaPredicted RBP16.81■□□□□ 0.28
PRPF39-203ENST00000477626 BLMP54132 1417 aaPredicted RBP16.8■□□□□ 0.28
PRPF39-203ENST00000477626 ATP7BP35670 1465 aa16.8■□□□□ 0.28
PRPF39-203ENST00000477626 NUTM2DQ5VT03 806 aaPredicted RBP16.8■□□□□ 0.28
PRPF39-203ENST00000477626 CEBPAP49715 358 aaPredicted RBP16.79■□□□□ 0.28
PRPF39-203ENST00000477626 NINLQ9Y2I6 1382 aa16.79■□□□□ 0.28
PRPF39-203ENST00000477626 PANK3Q9H999 370 aa16.78■□□□□ 0.28
PRPF39-203ENST00000477626 CPSF1Q10570 1443 aaKnown RBP16.78■□□□□ 0.28
PRPF39-203ENST00000477626 ROBO2Q9HCK4 1378 aa16.78■□□□□ 0.28
PRPF39-203ENST00000477626 SLC24A1O60721 1099 aa16.77■□□□□ 0.28
PRPF39-203ENST00000477626 XIRP1Q702N8 1843 aaKnown RBP16.77■□□□□ 0.28
PRPF39-203ENST00000477626 STRCQ7RTU9 1775 aa16.77■□□□□ 0.28
PRPF39-203ENST00000477626 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.76■□□□□ 0.27
PRPF39-203ENST00000477626 COL3A1P02461 1466 aaPredicted RBP16.76■□□□□ 0.27
PRPF39-203ENST00000477626 ANKRD36BQ8N2N9 1353 aa16.76■□□□□ 0.27
PRPF39-203ENST00000477626 MYBBP1AQ9BQG0 1328 aaKnown RBP16.76■□□□□ 0.27
PRPF39-203ENST00000477626 RALBP1Q15311 655 aa16.75■□□□□ 0.27
PRPF39-203ENST00000477626 CHGAP10645 457 aaKnown RBP16.75■□□□□ 0.27
PRPF39-203ENST00000477626 PNISRQ8TF01 805 aaKnown RBP16.75■□□□□ 0.27
PRPF39-203ENST00000477626 TRAK1Q9UPV9 953 aa16.75■□□□□ 0.27
PRPF39-203ENST00000477626 NKTRP30414 1462 aaKnown RBP16.73■□□□□ 0.27
PRPF39-203ENST00000477626 PIK3R4Q99570 1358 aa16.72■□□□□ 0.27
PRPF39-203ENST00000477626 CDCA8Q53HL2 280 aa16.72■□□□□ 0.27
PRPF39-203ENST00000477626 SSH2Q76I76 1423 aa16.72■□□□□ 0.27
PRPF39-203ENST00000477626 LRRC7Q96NW7 1537 aa16.71■□□□□ 0.27
PRPF39-203ENST00000477626 A0A1W2PP64 1363 aa16.71■□□□□ 0.27
PRPF39-203ENST00000477626 SCAF1Q9H7N4 1312 aaKnown RBP16.7■□□□□ 0.26
PRPF39-203ENST00000477626 SMG6Q86US8 1419 aaKnown RBP16.69■□□□□ 0.26
PRPF39-203ENST00000477626 NSD3Q9BZ95 1437 aa16.68■□□□□ 0.26
PRPF39-203ENST00000477626 PRAM1Q96QH2 718 aa16.68■□□□□ 0.26
PRPF39-203ENST00000477626 RGPD1P0DJD0 1748 aa16.68■□□□□ 0.26
PRPF39-203ENST00000477626 PIK3C2AO00443 1686 aa16.68■□□□□ 0.26
PRPF39-203ENST00000477626 IQSEC2Q5JU85 1478 aa16.67■□□□□ 0.26
PRPF39-203ENST00000477626 TBX22Q9Y458 520 aa16.66■□□□□ 0.26
PRPF39-203ENST00000477626 NSD2O96028 1365 aa16.66■□□□□ 0.26
PRPF39-203ENST00000477626 ATAD2Q6PL18 1390 aa16.66■□□□□ 0.26
PRPF39-203ENST00000477626 EVC2Q86UK5 1308 aa16.66■□□□□ 0.26
PRPF39-203ENST00000477626 MAP2P11137 1827 aaKnown RBP16.66■□□□□ 0.26
PRPF39-203ENST00000477626 PEAK1Q9H792 1746 aa16.64■□□□□ 0.26
PRPF39-203ENST00000477626 TRPM3Q9HCF6 1732 aaPredicted RBP16.64■□□□□ 0.26
PRPF39-203ENST00000477626 PHRF1Q9P1Y6 1649 aaKnown RBP16.63■□□□□ 0.25
PRPF39-203ENST00000477626 LMTK3Q96Q04 1460 aa16.63■□□□□ 0.25
PRPF39-203ENST00000477626 SLC12A5Q9H2X9 1139 aa16.63■□□□□ 0.25
PRPF39-203ENST00000477626 PRR36Q9H6K5 1346 aa16.63■□□□□ 0.25
PRPF39-203ENST00000477626 NLRP13Q86W25 1043 aa16.62■□□□□ 0.25
PRPF39-203ENST00000477626 PPP2R1AP30153 589 aa16.62■□□□□ 0.25
PRPF39-203ENST00000477626 WAPLQ7Z5K2 1190 aa16.62■□□□□ 0.25
PRPF39-203ENST00000477626 ZBED9Q6R2W3 1325 aa16.62■□□□□ 0.25
PRPF39-203ENST00000477626 POLR3AO14802 1390 aaPredicted RBP16.62■□□□□ 0.25
PRPF39-203ENST00000477626 CRYBG1Q9Y4K1 1723 aa16.62■□□□□ 0.25
PRPF39-203ENST00000477626 YTHDC1Q96MU7 727 aaKnown RBP16.61■□□□□ 0.25
PRPF39-203ENST00000477626 ESF1Q9H501 851 aaKnown RBP16.61■□□□□ 0.25
PRPF39-203ENST00000477626 PNPLA6Q8IY17 1366 aa16.6■□□□□ 0.25
PRPF39-203ENST00000477626 CABP2Q9NPB3 220 aa16.59■□□□□ 0.25
PRPF39-203ENST00000477626 CENPBP07199 599 aaPredicted RBP16.59■□□□□ 0.25
PRPF39-203ENST00000477626 THEMISQ8N1K5 641 aaPredicted RBP16.59■□□□□ 0.25
PRPF39-203ENST00000477626 ANKARQ7Z5J8 1434 aa16.58■□□□□ 0.24
PRPF39-203ENST00000477626 CDK19Q9BWU1 502 aa16.58■□□□□ 0.24
PRPF39-203ENST00000477626 MRS2Q9HD23 443 aa16.57■□□□□ 0.24
PRPF39-203ENST00000477626 NPHP4O75161 1426 aaPredicted RBP16.57■□□□□ 0.24
PRPF39-203ENST00000477626 EDC4Q6P2E9 1401 aaKnown RBP16.57■□□□□ 0.24
PRPF39-203ENST00000477626 PPIP5K1Q6PFW1 1433 aa16.57■□□□□ 0.24
PRPF39-203ENST00000477626 WASLO00401 505 aaPredicted RBP16.57■□□□□ 0.24
PRPF39-203ENST00000477626 HDGFP51858 240 aaKnown RBP16.57■□□□□ 0.24
PRPF39-203ENST00000477626 TXNDC2Q86VQ3 553 aa16.57■□□□□ 0.24
PRPF39-203ENST00000477626 ZNF521Q96K83 1311 aa16.56■□□□□ 0.24
PRPF39-203ENST00000477626 OVOS2A0A0J9YW53 1432 aa16.56■□□□□ 0.24
PRPF39-203ENST00000477626 OVOS2Q6IE36 1432 aa16.56■□□□□ 0.24
PRPF39-203ENST00000477626 STK26Q9P289 416 aa16.55■□□□□ 0.24
PRPF39-203ENST00000477626 MST1RQ04912 1400 aa16.54■□□□□ 0.24
PRPF39-203ENST00000477626 ALS2Q96Q42 1657 aa16.54■□□□□ 0.24
PRPF39-203ENST00000477626 STAG3Q9UJ98 1225 aa16.54■□□□□ 0.24
PRPF39-203ENST00000477626 CC2D1BQ5T0F9 858 aaKnown RBP16.54■□□□□ 0.24
PRPF39-203ENST00000477626 MINK1Q8N4C8 1332 aaPredicted RBP16.54■□□□□ 0.24
PRPF39-203ENST00000477626 KDM4FA0A1W2PPD8 638 aa16.52■□□□□ 0.24
PRPF39-203ENST00000477626 RNF123Q5XPI4 1314 aa16.52■□□□□ 0.23
PRPF39-203ENST00000477626 PLPPR3Q6T4P5 718 aa16.52■□□□□ 0.23
PRPF39-203ENST00000477626 KNSTRNQ9Y448 316 aa16.52■□□□□ 0.23
PRPF39-203ENST00000477626 KIF1AQ12756 1690 aa16.51■□□□□ 0.23
PRPF39-203ENST00000477626 USP6P35125 1406 aa16.51■□□□□ 0.23
PRPF39-203ENST00000477626 ADGRL3Q9HAR2 1447 aa16.51■□□□□ 0.23
PRPF39-203ENST00000477626 CAMTA1Q9Y6Y1 1673 aa16.5■□□□□ 0.23
PRPF39-203ENST00000477626 PLEKHG3A1L390 1219 aa16.5■□□□□ 0.23
PRPF39-203ENST00000477626 POLR3GLQ9BT43 218 aa16.5■□□□□ 0.23
PRPF39-203ENST00000477626 FYB1O15117 783 aa16.5■□□□□ 0.23
PRPF39-203ENST00000477626 DLG5Q8TDM6 1919 aa16.49■□□□□ 0.23
PRPF39-203ENST00000477626 AATKQ6ZMQ8 1374 aa16.49■□□□□ 0.23
PRPF39-203ENST00000477626 USP31Q70CQ4 1352 aa16.48■□□□□ 0.23
PRPF39-203ENST00000477626 CDK12Q9NYV4 1490 aaPredicted RBP16.48■□□□□ 0.23
PRPF39-203ENST00000477626 AMOTL2Q9Y2J4 779 aa16.48■□□□□ 0.23
PRPF39-203ENST00000477626 LTN1O94822 1766 aa16.48■□□□□ 0.23
PRPF39-203ENST00000477626 CGNL1Q0VF96 1302 aa16.47■□□□□ 0.23
PRPF39-203ENST00000477626 EID1Q9Y6B2 187 aa16.47■□□□□ 0.23
PRPF39-203ENST00000477626 SLC26A8Q96RN1 970 aa16.47■□□□□ 0.23
PRPF39-203ENST00000477626 NFAT5O94916 1531 aa16.47■□□□□ 0.23
PRPF39-203ENST00000477626 PHF23Q9BUL5 403 aaPredicted RBP16.46■□□□□ 0.23
PRPF39-203ENST00000477626 NCKAP5LQ9HCH0 1330 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms