RNA–Protein interactions for RNA: ENST00000477590.1

SYCP1-206, Transcript of synaptonemal complex protein 1, humanhuman

TSL 2

Gene SYCP1, Length 800 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-206ENST00000477590 ST8SIA5O15466 376 aa11.47□□□□□ -0.57
SYCP1-206ENST00000477590 CD2BP2O95400 341 aaKnown RBP11.47□□□□□ -0.57
SYCP1-206ENST00000477590 HLA-CQ95604 372 aa11.47□□□□□ -0.57
SYCP1-206ENST00000477590 ZC3H15Q8WU90 426 aaKnown RBP11.46□□□□□ -0.57
SYCP1-206ENST00000477590 MINK1Q8N4C8 1332 aaPredicted RBP11.45□□□□□ -0.58
SYCP1-206ENST00000477590 KDM4AO75164 1064 aa11.45□□□□□ -0.58
SYCP1-206ENST00000477590 CCDC102AQ96A19 550 aa11.45□□□□□ -0.58
SYCP1-206ENST00000477590 AAASQ9NRG9 546 aa11.44□□□□□ -0.58
SYCP1-206ENST00000477590 ZBTB24O43167 697 aaPredicted RBP11.43□□□□□ -0.58
SYCP1-206ENST00000477590 Q3C1V9 767 aa11.43□□□□□ -0.58
SYCP1-206ENST00000477590 TOR4AQ9NXH8 423 aa11.42□□□□□ -0.58
SYCP1-206ENST00000477590 CYP4X1Q8N118 509 aa11.41□□□□□ -0.58
SYCP1-206ENST00000477590 MMP16P51512 607 aa11.4□□□□□ -0.58
SYCP1-206ENST00000477590 GUCA2AQ02747 115 aa11.4□□□□□ -0.58
SYCP1-206ENST00000477590 USB1Q9BQ65 265 aaKnown RBP11.4□□□□□ -0.58
SYCP1-206ENST00000477590 HOXA2O43364 376 aa11.39□□□□□ -0.59
SYCP1-206ENST00000477590 GPCPD1Q9NPB8 672 aa11.38□□□□□ -0.59
SYCP1-206ENST00000477590 DACH1Q9UI36 760 aa11.38□□□□□ -0.59
SYCP1-206ENST00000477590 USP46P62068 366 aa11.37□□□□□ -0.59
SYCP1-206ENST00000477590 KRI1Q8N9T8 703 aaKnown RBP11.37□□□□□ -0.59
SYCP1-206ENST00000477590 FAM217BQ9NTX9 383 aaPredicted RBP11.37□□□□□ -0.59
SYCP1-206ENST00000477590 DXOO77932 396 aaKnown RBP11.36□□□□□ -0.59
SYCP1-206ENST00000477590 TRIM32Q13049 653 aa11.36□□□□□ -0.59
SYCP1-206ENST00000477590 TTC24A2A3L6 582 aaPredicted RBP11.35□□□□□ -0.59
SYCP1-206ENST00000477590 ZMYND10O75800 440 aa11.35□□□□□ -0.59
SYCP1-206ENST00000477590 AVPP01185 164 aa11.35□□□□□ -0.59
SYCP1-206ENST00000477590 CLCN1P35523 988 aa11.35□□□□□ -0.59
SYCP1-206ENST00000477590 CCDC24Q8N4L8 307 aa11.35□□□□□ -0.59
SYCP1-206ENST00000477590 SYMPKQ92797 1274 aaKnown RBP11.35□□□□□ -0.59
SYCP1-206ENST00000477590 REPIN1Q9BWE0 567 aaKnown RBP11.34□□□□□ -0.59
SYCP1-206ENST00000477590 WNT7AO00755 349 aa11.33□□□□□ -0.6
SYCP1-206ENST00000477590 CRIPAKQ8N1N5 446 aa11.33□□□□□ -0.6
SYCP1-206ENST00000477590 AXIN1O15169 862 aa11.32□□□□□ -0.6
SYCP1-206ENST00000477590 BARGINQ6ZT62 677 aa11.31□□□□□ -0.6
SYCP1-206ENST00000477590 NUTM1Q86Y26 1132 aa11.31□□□□□ -0.6
SYCP1-206ENST00000477590 MRGPRX2Q96LB1 330 aa11.31□□□□□ -0.6
SYCP1-206ENST00000477590 SNIP1Q8TAD8 396 aaKnown RBP11.3□□□□□ -0.6
SYCP1-206ENST00000477590 SLC24A3Q9HC58 644 aa11.3□□□□□ -0.6
SYCP1-206ENST00000477590 SMPD1P17405 629 aa11.29□□□□□ -0.6
SYCP1-206ENST00000477590 GMPR2Q9P2T1 348 aaKnown RBP11.29□□□□□ -0.6
SYCP1-206ENST00000477590 J3QL48 77 aa11.28□□□□□ -0.6
SYCP1-206ENST00000477590 CTC1Q2NKJ3 1217 aa11.28□□□□□ -0.6
SYCP1-206ENST00000477590 JUNDP17535 347 aa11.27□□□□□ -0.61
SYCP1-206ENST00000477590 SKOR1P84550 965 aa11.27□□□□□ -0.61
SYCP1-206ENST00000477590 SSTR3P32745 418 aaPredicted RBP11.26□□□□□ -0.61
SYCP1-206ENST00000477590 SMCPP49901 116 aaPredicted RBP11.26□□□□□ -0.61
SYCP1-206ENST00000477590 PCDHGC3Q9UN70 934 aa11.26□□□□□ -0.61
SYCP1-206ENST00000477590 FDX1P10109 184 aa11.25□□□□□ -0.61
SYCP1-206ENST00000477590 RC3H1Q5TC82 1133 aaKnown RBP11.25□□□□□ -0.61
SYCP1-206ENST00000477590 RETREG3Q86VR2 466 aa11.24□□□□□ -0.61
SYCP1-206ENST00000477590 AK7Q96M32 723 aa11.24□□□□□ -0.61
SYCP1-206ENST00000477590 C11orf95C9JLR9 678 aaPredicted RBP11.23□□□□□ -0.61
SYCP1-206ENST00000477590 PTCRAQ6ISU1 281 aaPredicted RBP11.23□□□□□ -0.61
SYCP1-206ENST00000477590 SPIRE2Q8WWL2 714 aa11.23□□□□□ -0.61
SYCP1-206ENST00000477590 NUDT12Q9BQG2 462 aa11.23□□□□□ -0.61
SYCP1-206ENST00000477590 C6orf229H3BNL8 230 aa11.22□□□□□ -0.61
SYCP1-206ENST00000477590 NDUFV2P19404 249 aa11.22□□□□□ -0.61
SYCP1-206ENST00000477590 TTLL12Q14166 644 aaPredicted RBP11.22□□□□□ -0.61
SYCP1-206ENST00000477590 HPS1Q92902 700 aa11.22□□□□□ -0.61
SYCP1-206ENST00000477590 WNT7BP56706 349 aa11.2□□□□□ -0.62
SYCP1-206ENST00000477590 TREML4Q6UXN2 200 aa11.2□□□□□ -0.62
SYCP1-206ENST00000477590 MOXD2PA6NHM9 499 aa11.19□□□□□ -0.62
SYCP1-206ENST00000477590 ATP13A2Q9NQ11 1180 aa11.19□□□□□ -0.62
SYCP1-206ENST00000477590 LCE2AQ5TA79 106 aaPredicted RBP11.18□□□□□ -0.62
SYCP1-206ENST00000477590 AMHR2Q16671 573 aa11.17□□□□□ -0.62
SYCP1-206ENST00000477590 GIGYF2Q6Y7W6 1299 aaKnown RBP11.17□□□□□ -0.62
SYCP1-206ENST00000477590 ALDH1A1P00352 501 aa11.16□□□□□ -0.62
SYCP1-206ENST00000477590 MS4A1P11836 297 aa11.16□□□□□ -0.62
SYCP1-206ENST00000477590 NEUROD2Q15784 382 aa11.16□□□□□ -0.62
SYCP1-206ENST00000477590 CCNYL3P0C7X3 344 aa11.14□□□□□ -0.63
SYCP1-206ENST00000477590 SNRPBP14678 240 aaKnown RBP11.14□□□□□ -0.63
SYCP1-206ENST00000477590 TRIM66O15016 1216 aa11.13□□□□□ -0.63
SYCP1-206ENST00000477590 SIAH2O43255 324 aa11.13□□□□□ -0.63
SYCP1-206ENST00000477590 SH3BP2P78314 561 aa11.13□□□□□ -0.63
SYCP1-206ENST00000477590 EHBP1Q8NDI1 1231 aa11.13□□□□□ -0.63
SYCP1-206ENST00000477590 PRR7Q8TB68 274 aa11.13□□□□□ -0.63
SYCP1-206ENST00000477590 BEGAINQ9BUH8 593 aa11.13□□□□□ -0.63
SYCP1-206ENST00000477590 WFS1O76024 890 aa11.11□□□□□ -0.63
SYCP1-206ENST00000477590 MTMR2Q13614 643 aa11.11□□□□□ -0.63
SYCP1-206ENST00000477590 PTPRNQ16849 979 aa11.11□□□□□ -0.63
SYCP1-206ENST00000477590 UNC93B1Q9H1C4 597 aa11.11□□□□□ -0.63
SYCP1-206ENST00000477590 EVA1BQ9NVM1 165 aa11.11□□□□□ -0.63
SYCP1-206ENST00000477590 LINC01559Q495D7 138 aa11.1□□□□□ -0.63
SYCP1-206ENST00000477590 BRPF1P55201 1214 aaPredicted RBP11.09□□□□□ -0.63
SYCP1-206ENST00000477590 PDE4DQ08499 809 aa11.09□□□□□ -0.63
SYCP1-206ENST00000477590 NFX1Q12986 1120 aaKnown RBP11.09□□□□□ -0.63
SYCP1-206ENST00000477590 PARP9Q8IXQ6 854 aa11.09□□□□□ -0.63
SYCP1-206ENST00000477590 BAP1Q92560 729 aa11.09□□□□□ -0.63
SYCP1-206ENST00000477590 TRIM47Q96LD4 638 aa11.09□□□□□ -0.63
SYCP1-206ENST00000477590 TBC1D2Q9BYX2 928 aa11.09□□□□□ -0.63
SYCP1-206ENST00000477590 KCNH2Q12809 1159 aa11.08□□□□□ -0.64
SYCP1-206ENST00000477590 SENP2Q9HC62 589 aa11.08□□□□□ -0.64
SYCP1-206ENST00000477590 PCDHB15Q9Y5E8 787 aa11.07□□□□□ -0.64
SYCP1-206ENST00000477590 WASF2Q9Y6W5 498 aa11.07□□□□□ -0.64
SYCP1-206ENST00000477590 RSBN1LQ6PCB5 846 aaPredicted RBP11.06□□□□□ -0.64
SYCP1-206ENST00000477590 TLL2Q9Y6L7 1015 aa11.05□□□□□ -0.64
SYCP1-206ENST00000477590 SPDYE5A6NIY4 337 aa11.04□□□□□ -0.64
SYCP1-206ENST00000477590 DESI1Q6ICB0 168 aa11.04□□□□□ -0.64
SYCP1-206ENST00000477590 CFAP99D6REC4 459 aa11.03□□□□□ -0.64
SYCP1-206ENST00000477590 BMP1P13497 986 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms