RNA–Protein interactions for RNA: ENST00000477583.1

CACUL1-202, Transcript of CDK2 associated cullin domain 1, humanhuman

TSL 1 (best)

Gene CACUL1, Length 432 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACUL1-202ENST00000477583 KDM2AQ9Y2K7 1162 aa6.4□□□□□ -1.38
CACUL1-202ENST00000477583 KDM4AO75164 1064 aa6.39□□□□□ -1.39
CACUL1-202ENST00000477583 AVPP01185 164 aa6.39□□□□□ -1.39
CACUL1-202ENST00000477583 TTC24A2A3L6 582 aaPredicted RBP6.38□□□□□ -1.39
CACUL1-202ENST00000477583 AXIN1O15169 862 aa6.38□□□□□ -1.39
CACUL1-202ENST00000477583 MMP16P51512 607 aa6.38□□□□□ -1.39
CACUL1-202ENST00000477583 MDM2Q00987 491 aaPredicted RBP6.38□□□□□ -1.39
CACUL1-202ENST00000477583 TRIM32Q13049 653 aa6.38□□□□□ -1.39
CACUL1-202ENST00000477583 CTC1Q2NKJ3 1217 aa6.38□□□□□ -1.39
CACUL1-202ENST00000477583 VSIG10Q8N0Z9 540 aa6.38□□□□□ -1.39
CACUL1-202ENST00000477583 MINK1Q8N4C8 1332 aaPredicted RBP6.37□□□□□ -1.39
CACUL1-202ENST00000477583 WNT7AO00755 349 aa6.37□□□□□ -1.39
CACUL1-202ENST00000477583 IRF6O14896 467 aa6.37□□□□□ -1.39
CACUL1-202ENST00000477583 USP46P62068 366 aa6.37□□□□□ -1.39
CACUL1-202ENST00000477583 USB1Q9BQ65 265 aaKnown RBP6.37□□□□□ -1.39
CACUL1-202ENST00000477583 DXOO77932 396 aaKnown RBP6.36□□□□□ -1.39
CACUL1-202ENST00000477583 HLA-CQ95604 372 aa6.36□□□□□ -1.39
CACUL1-202ENST00000477583 CCDC102AQ96A19 550 aa6.36□□□□□ -1.39
CACUL1-202ENST00000477583 DACH1Q9UI36 760 aa6.36□□□□□ -1.39
CACUL1-202ENST00000477583 HOXA2O43364 376 aa6.35□□□□□ -1.39
CACUL1-202ENST00000477583 SMCPP49901 116 aaPredicted RBP6.35□□□□□ -1.39
CACUL1-202ENST00000477583 GMPR2Q9P2T1 348 aaKnown RBP6.35□□□□□ -1.39
CACUL1-202ENST00000477583 CCDC24Q8N4L8 307 aa6.34□□□□□ -1.39
CACUL1-202ENST00000477583 SNIP1Q8TAD8 396 aaKnown RBP6.34□□□□□ -1.39
CACUL1-202ENST00000477583 MRGPRX2Q96LB1 330 aa6.34□□□□□ -1.39
CACUL1-202ENST00000477583 REPIN1Q9BWE0 567 aaKnown RBP6.34□□□□□ -1.39
CACUL1-202ENST00000477583 GPCPD1Q9NPB8 672 aa6.34□□□□□ -1.39
CACUL1-202ENST00000477583 SMPD1P17405 629 aa6.33□□□□□ -1.4
CACUL1-202ENST00000477583 CLCN1P35523 988 aa6.33□□□□□ -1.4
CACUL1-202ENST00000477583 TREML4Q6UXN2 200 aa6.33□□□□□ -1.4
CACUL1-202ENST00000477583 C11orf95C9JLR9 678 aaPredicted RBP6.32□□□□□ -1.4
CACUL1-202ENST00000477583 GUCA2AQ02747 115 aa6.32□□□□□ -1.4
CACUL1-202ENST00000477583 FAM217BQ9NTX9 383 aaPredicted RBP6.32□□□□□ -1.4
CACUL1-202ENST00000477583 J3QL48 77 aa6.31□□□□□ -1.4
CACUL1-202ENST00000477583 JUNDP17535 347 aa6.31□□□□□ -1.4
CACUL1-202ENST00000477583 NUTM1Q86Y26 1132 aa6.31□□□□□ -1.4
CACUL1-202ENST00000477583 KRI1Q8N9T8 703 aaKnown RBP6.31□□□□□ -1.4
CACUL1-202ENST00000477583 WNT7BP56706 349 aa6.3□□□□□ -1.4
CACUL1-202ENST00000477583 SKOR1P84550 965 aa6.3□□□□□ -1.4
CACUL1-202ENST00000477583 SYMPKQ92797 1274 aaKnown RBP6.3□□□□□ -1.4
CACUL1-202ENST00000477583 LCE2AQ5TA79 106 aaPredicted RBP6.29□□□□□ -1.4
CACUL1-202ENST00000477583 RC3H1Q5TC82 1133 aaKnown RBP6.29□□□□□ -1.4
CACUL1-202ENST00000477583 RETREG3Q86VR2 466 aa6.29□□□□□ -1.4
CACUL1-202ENST00000477583 ATP13A2Q9NQ11 1180 aa6.29□□□□□ -1.4
CACUL1-202ENST00000477583 WFS1O76024 890 aa6.28□□□□□ -1.4
CACUL1-202ENST00000477583 HPS1Q92902 700 aa6.28□□□□□ -1.4
CACUL1-202ENST00000477583 NUDT12Q9BQG2 462 aa6.28□□□□□ -1.4
CACUL1-202ENST00000477583 FDX1P10109 184 aa6.27□□□□□ -1.41
CACUL1-202ENST00000477583 SENP2Q9HC62 589 aa6.27□□□□□ -1.41
CACUL1-202ENST00000477583 C6orf229H3BNL8 230 aa6.26□□□□□ -1.41
CACUL1-202ENST00000477583 ALDH1A1P00352 501 aa6.26□□□□□ -1.41
CACUL1-202ENST00000477583 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.26□□□□□ -1.41
CACUL1-202ENST00000477583 TRIM47Q96LD4 638 aa6.26□□□□□ -1.41
CACUL1-202ENST00000477583 NFX1Q12986 1120 aaKnown RBP6.25□□□□□ -1.41
CACUL1-202ENST00000477583 EHBP1Q8NDI1 1231 aa6.25□□□□□ -1.41
CACUL1-202ENST00000477583 CCNYL3P0C7X3 344 aa6.24□□□□□ -1.41
CACUL1-202ENST00000477583 MS4A1P11836 297 aa6.24□□□□□ -1.41
CACUL1-202ENST00000477583 SNRPBP14678 240 aaKnown RBP6.24□□□□□ -1.41
CACUL1-202ENST00000477583 SSTR3P32745 418 aaPredicted RBP6.24□□□□□ -1.41
CACUL1-202ENST00000477583 TTLL12Q14166 644 aaPredicted RBP6.24□□□□□ -1.41
CACUL1-202ENST00000477583 PTCRAQ6ISU1 281 aaPredicted RBP6.24□□□□□ -1.41
CACUL1-202ENST00000477583 KIFC2Q96AC6 838 aa6.24□□□□□ -1.41
CACUL1-202ENST00000477583 PCDHGC3Q9UN70 934 aa6.24□□□□□ -1.41
CACUL1-202ENST00000477583 SPIRE2Q8WWL2 714 aa6.23□□□□□ -1.41
CACUL1-202ENST00000477583 PTPRNQ16849 979 aa6.22□□□□□ -1.41
CACUL1-202ENST00000477583 WASF2Q9Y6W5 498 aa6.22□□□□□ -1.41
CACUL1-202ENST00000477583 MOXD2PA6NHM9 499 aa6.21□□□□□ -1.42
CACUL1-202ENST00000477583 TERTO14746 1132 aaKnown RBP6.21□□□□□ -1.42
CACUL1-202ENST00000477583 SIAH2O43255 324 aa6.21□□□□□ -1.42
CACUL1-202ENST00000477583 NDUFV2P19404 249 aa6.21□□□□□ -1.42
CACUL1-202ENST00000477583 SH3BP2P78314 561 aa6.21□□□□□ -1.42
CACUL1-202ENST00000477583 UNC93B1Q9H1C4 597 aa6.21□□□□□ -1.42
CACUL1-202ENST00000477583 WIPF1O43516 503 aa6.2□□□□□ -1.42
CACUL1-202ENST00000477583 AMHR2Q16671 573 aa6.2□□□□□ -1.42
CACUL1-202ENST00000477583 GIGYF2Q6Y7W6 1299 aaKnown RBP6.2□□□□□ -1.42
CACUL1-202ENST00000477583 BARGINQ6ZT62 677 aa6.2□□□□□ -1.42
CACUL1-202ENST00000477583 PRR7Q8TB68 274 aa6.2□□□□□ -1.42
CACUL1-202ENST00000477583 SPDYE5A6NIY4 337 aa6.19□□□□□ -1.42
CACUL1-202ENST00000477583 CAPN5O15484 640 aaPredicted RBP6.19□□□□□ -1.42
CACUL1-202ENST00000477583 ZMYND10O75800 440 aa6.19□□□□□ -1.42
CACUL1-202ENST00000477583 BMP1P13497 986 aa6.19□□□□□ -1.42
CACUL1-202ENST00000477583 INSM1Q01101 510 aaPredicted RBP6.19□□□□□ -1.42
CACUL1-202ENST00000477583 KCNH2Q12809 1159 aa6.19□□□□□ -1.42
CACUL1-202ENST00000477583 MTMR2Q13614 643 aa6.19□□□□□ -1.42
CACUL1-202ENST00000477583 LINC01559Q495D7 138 aa6.19□□□□□ -1.42
CACUL1-202ENST00000477583 EVA1BQ9NVM1 165 aa6.19□□□□□ -1.42
CACUL1-202ENST00000477583 DESI1Q6ICB0 168 aa6.18□□□□□ -1.42
CACUL1-202ENST00000477583 BAP1Q92560 729 aa6.18□□□□□ -1.42
CACUL1-202ENST00000477583 BCANQ96GW7 911 aa6.18□□□□□ -1.42
CACUL1-202ENST00000477583 BEGAINQ9BUH8 593 aa6.18□□□□□ -1.42
CACUL1-202ENST00000477583 STK17AQ9UEE5 414 aa6.18□□□□□ -1.42
CACUL1-202ENST00000477583 TLL2Q9Y6L7 1015 aa6.18□□□□□ -1.42
CACUL1-202ENST00000477583 LCE2CQ5TA81 110 aa6.17□□□□□ -1.42
CACUL1-202ENST00000477583 TRIM46Q7Z4K8 759 aa6.17□□□□□ -1.42
CACUL1-202ENST00000477583 ZNF511Q8NB15 262 aa6.17□□□□□ -1.42
CACUL1-202ENST00000477583 ZC3H15Q8WU90 426 aaKnown RBP6.17□□□□□ -1.42
CACUL1-202ENST00000477583 PLEKHG3A1L390 1219 aa6.16□□□□□ -1.42
CACUL1-202ENST00000477583 VARSP26640 1264 aaKnown RBP6.16□□□□□ -1.42
CACUL1-202ENST00000477583 DIXDC1Q155Q3 683 aa6.16□□□□□ -1.42
CACUL1-202ENST00000477583 SLC16A10Q8TF71 515 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms