RNA–Protein interactions for RNA: ENST00000477572.1

VPS50-213, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-213ENST00000477572 NDUFV2P19404 249 aa11.19□□□□□ -0.62
VPS50-213ENST00000477572 MOXD2PA6NHM9 499 aa11.17□□□□□ -0.62
VPS50-213ENST00000477572 FDX1P10109 184 aa11.17□□□□□ -0.62
VPS50-213ENST00000477572 USB1Q9BQ65 265 aaKnown RBP11.17□□□□□ -0.62
VPS50-213ENST00000477572 PCDHGC3Q9UN70 934 aa11.17□□□□□ -0.62
VPS50-213ENST00000477572 SPRYD7Q5W111 196 aa11.16□□□□□ -0.62
VPS50-213ENST00000477572 MSS51Q4VC12 460 aa11.15□□□□□ -0.62
VPS50-213ENST00000477572 C6orf229H3BNL8 230 aa11.14□□□□□ -0.63
VPS50-213ENST00000477572 Q6ZNB5 142 aa11.14□□□□□ -0.63
VPS50-213ENST00000477572 TBC1D2Q9BYX2 928 aa11.14□□□□□ -0.63
VPS50-213ENST00000477572 PDZRN3Q9UPQ7 1066 aa11.14□□□□□ -0.63
VPS50-213ENST00000477572 ZNF697Q5TEC3 545 aa11.12□□□□□ -0.63
VPS50-213ENST00000477572 ZNF598Q86UK7 904 aaKnown RBP11.11□□□□□ -0.63
VPS50-213ENST00000477572 TRIM67Q6ZTA4 783 aa11.1□□□□□ -0.63
VPS50-213ENST00000477572 CCDC24Q8N4L8 307 aa11.1□□□□□ -0.63
VPS50-213ENST00000477572 TNFRSF10AO00220 468 aa11.09□□□□□ -0.63
VPS50-213ENST00000477572 DXOO77932 396 aaKnown RBP11.09□□□□□ -0.63
VPS50-213ENST00000477572 MMP16P51512 607 aa11.09□□□□□ -0.63
VPS50-213ENST00000477572 FOXC1Q12948 553 aa11.08□□□□□ -0.64
VPS50-213ENST00000477572 RETREG3Q86VR2 466 aa11.08□□□□□ -0.64
VPS50-213ENST00000477572 GPBP1L1Q9HC44 474 aaPredicted RBP11.08□□□□□ -0.64
VPS50-213ENST00000477572 PCDHB15Q9Y5E8 787 aa11.08□□□□□ -0.64
VPS50-213ENST00000477572 NRG2O14511 850 aaPredicted RBP11.07□□□□□ -0.64
VPS50-213ENST00000477572 LAPTM4AQ15012 233 aa11.07□□□□□ -0.64
VPS50-213ENST00000477572 CSPP1Q1MSJ5 1256 aa11.07□□□□□ -0.64
VPS50-213ENST00000477572 RSBN1LQ6PCB5 846 aaPredicted RBP11.06□□□□□ -0.64
VPS50-213ENST00000477572 ZBTB24O43167 697 aaPredicted RBP11.05□□□□□ -0.64
VPS50-213ENST00000477572 JUNDP17535 347 aa11.05□□□□□ -0.64
VPS50-213ENST00000477572 RPIAP49247 311 aa11.05□□□□□ -0.64
VPS50-213ENST00000477572 CD2BP2O95400 341 aaKnown RBP11.04□□□□□ -0.64
VPS50-213ENST00000477572 RIC3Q7Z5B4 369 aa11.04□□□□□ -0.64
VPS50-213ENST00000477572 MTMR2Q13614 643 aa11.03□□□□□ -0.64
VPS50-213ENST00000477572 DIXDC1Q155Q3 683 aa11.03□□□□□ -0.64
VPS50-213ENST00000477572 PRR7Q8TB68 274 aa11.03□□□□□ -0.64
VPS50-213ENST00000477572 LCE2BO14633 110 aa11.02□□□□□ -0.65
VPS50-213ENST00000477572 SPTLC1O15269 473 aa11.02□□□□□ -0.65
VPS50-213ENST00000477572 GDF9O60383 454 aa11.02□□□□□ -0.65
VPS50-213ENST00000477572 MYSM1Q5VVJ2 828 aa11.02□□□□□ -0.65
VPS50-213ENST00000477572 CABLES1Q8TDN4 633 aa11.02□□□□□ -0.65
VPS50-213ENST00000477572 PKD2L1Q9P0L9 805 aa11.02□□□□□ -0.65
VPS50-213ENST00000477572 LIMD1Q9UGP4 676 aa11.02□□□□□ -0.65
VPS50-213ENST00000477572 KDM4CQ9H3R0 1056 aa11.01□□□□□ -0.65
VPS50-213ENST00000477572 TRIM32Q13049 653 aa11□□□□□ -0.65
VPS50-213ENST00000477572 NUDT12Q9BQG2 462 aa11□□□□□ -0.65
VPS50-213ENST00000477572 POLR3EQ9NVU0 708 aa11□□□□□ -0.65
VPS50-213ENST00000477572 HRCP23327 699 aa10.99□□□□□ -0.65
VPS50-213ENST00000477572 PTCRAQ6ISU1 281 aaPredicted RBP10.99□□□□□ -0.65
VPS50-213ENST00000477572 TRAF7Q6Q0C0 670 aa10.98□□□□□ -0.65
VPS50-213ENST00000477572 CFAP99D6REC4 459 aa10.97□□□□□ -0.65
VPS50-213ENST00000477572 PRR20EP86478 221 aa10.97□□□□□ -0.65
VPS50-213ENST00000477572 PRR20CP86479 221 aa10.97□□□□□ -0.65
VPS50-213ENST00000477572 PRR20DP86480 221 aa10.97□□□□□ -0.65
VPS50-213ENST00000477572 PRR20BP86481 221 aa10.97□□□□□ -0.65
VPS50-213ENST00000477572 PRR20AP86496 221 aa10.97□□□□□ -0.65
VPS50-213ENST00000477572 QPCTQ16769 361 aa10.97□□□□□ -0.65
VPS50-213ENST00000477572 FAM117AQ9C073 453 aa10.97□□□□□ -0.65
VPS50-213ENST00000477572 FAM187AA6NFU0 413 aa10.96□□□□□ -0.65
VPS50-213ENST00000477572 SPDYE5A6NIY4 337 aa10.96□□□□□ -0.65
VPS50-213ENST00000477572 GJA5P36382 358 aa10.96□□□□□ -0.65
VPS50-213ENST00000477572 ZBTB3Q9H5J0 574 aa10.96□□□□□ -0.65
VPS50-213ENST00000477572 NUTM2BA6NNL0 878 aaPredicted RBP10.95□□□□□ -0.66
VPS50-213ENST00000477572 NUTM2EB1AL46 878 aaPredicted RBP10.95□□□□□ -0.66
VPS50-213ENST00000477572 PKDCCQ504Y2 493 aa10.95□□□□□ -0.66
VPS50-213ENST00000477572 NUTM2DQ5VT03 806 aaPredicted RBP10.95□□□□□ -0.66
VPS50-213ENST00000477572 NUTM2AQ8IVF1 878 aaPredicted RBP10.95□□□□□ -0.66
VPS50-213ENST00000477572 TSC1Q92574 1164 aa10.95□□□□□ -0.66
VPS50-213ENST00000477572 CCNYL3P0C7X3 344 aa10.94□□□□□ -0.66
VPS50-213ENST00000477572 CLK2P49760 499 aaKnown RBP10.93□□□□□ -0.66
VPS50-213ENST00000477572 SKOR1P84550 965 aa10.93□□□□□ -0.66
VPS50-213ENST00000477572 TPRNQ4KMQ1 711 aa10.93□□□□□ -0.66
VPS50-213ENST00000477572 ATP1B4Q9UN42 357 aaPredicted RBP10.93□□□□□ -0.66
VPS50-213ENST00000477572 PTPRNQ16849 979 aa10.92□□□□□ -0.66
VPS50-213ENST00000477572 CYP4X1Q8N118 509 aa10.92□□□□□ -0.66
VPS50-213ENST00000477572 RSPH6AQ9H0K4 717 aa10.92□□□□□ -0.66
VPS50-213ENST00000477572 RTL5Q5HYW3 569 aaPredicted RBP10.91□□□□□ -0.66
VPS50-213ENST00000477572 CTHP32929 405 aa10.9□□□□□ -0.66
VPS50-213ENST00000477572 LINC01559Q495D7 138 aa10.9□□□□□ -0.66
VPS50-213ENST00000477572 RC3H1Q5TC82 1133 aaKnown RBP10.9□□□□□ -0.66
VPS50-213ENST00000477572 PRPF38BQ5VTL8 546 aaKnown RBP10.9□□□□□ -0.66
VPS50-213ENST00000477572 MRGPRX2Q96LB1 330 aa10.9□□□□□ -0.66
VPS50-213ENST00000477572 EVA1BQ9NVM1 165 aa10.9□□□□□ -0.66
VPS50-213ENST00000477572 PLEKHG3A1L390 1219 aa10.89□□□□□ -0.67
VPS50-213ENST00000477572 TTC24A2A3L6 582 aaPredicted RBP10.89□□□□□ -0.67
VPS50-213ENST00000477572 WNT7AO00755 349 aa10.89□□□□□ -0.67
VPS50-213ENST00000477572 PER1O15534 1290 aaPredicted RBP10.89□□□□□ -0.67
VPS50-213ENST00000477572 LILRB3O75022 631 aa10.89□□□□□ -0.67
VPS50-213ENST00000477572 DGAT1O75907 488 aa10.89□□□□□ -0.67
VPS50-213ENST00000477572 NEUROD2Q15784 382 aa10.89□□□□□ -0.67
VPS50-213ENST00000477572 DESI1Q6ICB0 168 aa10.89□□□□□ -0.67
VPS50-213ENST00000477572 LYPD8Q6UX82 237 aa10.89□□□□□ -0.67
VPS50-213ENST00000477572 PROCA1Q8NCQ7 364 aaPredicted RBP10.89□□□□□ -0.67
VPS50-213ENST00000477572 TOR4AQ9NXH8 423 aa10.89□□□□□ -0.67
VPS50-213ENST00000477572 KCNH2Q12809 1159 aa10.88□□□□□ -0.67
VPS50-213ENST00000477572 UNC93B1Q9H1C4 597 aa10.88□□□□□ -0.67
VPS50-213ENST00000477572 MYT1Q01538 1121 aa10.87□□□□□ -0.67
VPS50-213ENST00000477572 DDRGK1Q96HY6 314 aa10.87□□□□□ -0.67
VPS50-213ENST00000477572 MAP10Q9P2G4 905 aa10.87□□□□□ -0.67
VPS50-213ENST00000477572 BAP1Q92560 729 aa10.86□□□□□ -0.67
VPS50-213ENST00000477572 J3QL48 77 aa10.85□□□□□ -0.67
VPS50-213ENST00000477572 ST8SIA5O15466 376 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms