RNA–Protein interactions for RNA: ENST00000477447.6

TARDBP-208, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 409 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-208ENST00000477447 ZBTB3Q9H5J0 574 aa7.01□□□□□ -1.29
TARDBP-208ENST00000477447 C6orf229H3BNL8 230 aa7□□□□□ -1.29
TARDBP-208ENST00000477447 MTMR2Q13614 643 aa7□□□□□ -1.29
TARDBP-208ENST00000477447 HCSTQ9UBK5 93 aa7□□□□□ -1.29
TARDBP-208ENST00000477447 LILRB3O75022 631 aa6.99□□□□□ -1.29
TARDBP-208ENST00000477447 HRCP23327 699 aa6.99□□□□□ -1.29
TARDBP-208ENST00000477447 Q3C1V9 767 aa6.99□□□□□ -1.29
TARDBP-208ENST00000477447 PRPF38BQ5VTL8 546 aaKnown RBP6.99□□□□□ -1.29
TARDBP-208ENST00000477447 FBXO31Q5XUX0 539 aaPredicted RBP6.99□□□□□ -1.29
TARDBP-208ENST00000477447 RNF19BQ6ZMZ0 732 aa6.99□□□□□ -1.29
TARDBP-208ENST00000477447 MTRQ99707 1265 aa6.99□□□□□ -1.29
TARDBP-208ENST00000477447 RFC5P40937 340 aa6.98□□□□□ -1.29
TARDBP-208ENST00000477447 RTL5Q5HYW3 569 aaPredicted RBP6.98□□□□□ -1.29
TARDBP-208ENST00000477447 SCUBE3Q8IX30 993 aa6.98□□□□□ -1.29
TARDBP-208ENST00000477447 SYMPKQ92797 1274 aaKnown RBP6.98□□□□□ -1.29
TARDBP-208ENST00000477447 TLL1O43897 1013 aa6.97□□□□□ -1.29
TARDBP-208ENST00000477447 FMNL1O95466 1100 aaPredicted RBP6.97□□□□□ -1.29
TARDBP-208ENST00000477447 PPP2R2DQ66LE6 453 aa6.97□□□□□ -1.29
TARDBP-208ENST00000477447 TSC1Q92574 1164 aa6.97□□□□□ -1.29
TARDBP-208ENST00000477447 RETREG3Q86VR2 466 aa6.96□□□□□ -1.3
TARDBP-208ENST00000477447 IL21Q9HBE4 155 aa6.96□□□□□ -1.3
TARDBP-208ENST00000477447 SPDYE5A6NIY4 337 aa6.95□□□□□ -1.3
TARDBP-208ENST00000477447 CFAP99D6REC4 459 aa6.95□□□□□ -1.3
TARDBP-208ENST00000477447 ZPR1O75312 459 aa6.95□□□□□ -1.3
TARDBP-208ENST00000477447 TJAP1Q5JTD0 557 aa6.95□□□□□ -1.3
TARDBP-208ENST00000477447 BRICD5Q6PL45 260 aa6.95□□□□□ -1.3
TARDBP-208ENST00000477447 PRR7Q8TB68 274 aa6.95□□□□□ -1.3
TARDBP-208ENST00000477447 THAP11Q96EK4 314 aa6.95□□□□□ -1.3
TARDBP-208ENST00000477447 AP1G2O75843 785 aa6.94□□□□□ -1.3
TARDBP-208ENST00000477447 ZNF516Q92618 1163 aa6.94□□□□□ -1.3
TARDBP-208ENST00000477447 USB1Q9BQ65 265 aaKnown RBP6.94□□□□□ -1.3
TARDBP-208ENST00000477447 SALL2Q9Y467 1007 aaPredicted RBP6.94□□□□□ -1.3
TARDBP-208ENST00000477447 ADH1BP00325 375 aa6.93□□□□□ -1.3
TARDBP-208ENST00000477447 TMEM259Q4ZIN3 620 aa6.93□□□□□ -1.3
TARDBP-208ENST00000477447 HELBQ8NG08 1087 aaPredicted RBP6.93□□□□□ -1.3
TARDBP-208ENST00000477447 SPSB2Q99619 263 aa6.93□□□□□ -1.3
TARDBP-208ENST00000477447 USP17L8P0C7I0 530 aa6.92□□□□□ -1.3
TARDBP-208ENST00000477447 PRDM9Q9NQV7 894 aa6.92□□□□□ -1.3
TARDBP-208ENST00000477447 MCM6Q14566 821 aa6.91□□□□□ -1.3
TARDBP-208ENST00000477447 NKX2-3Q8TAU0 364 aa6.91□□□□□ -1.3
TARDBP-208ENST00000477447 KCNC4Q03721 635 aa6.9□□□□□ -1.3
TARDBP-208ENST00000477447 CTDSPL2Q05D32 466 aa6.9□□□□□ -1.3
TARDBP-208ENST00000477447 FLIIQ13045 1269 aa6.9□□□□□ -1.3
TARDBP-208ENST00000477447 MSS51Q4VC12 460 aa6.9□□□□□ -1.3
TARDBP-208ENST00000477447 BANK1Q8NDB2 785 aa6.9□□□□□ -1.3
TARDBP-208ENST00000477447 ITGBL1O95965 494 aaPredicted RBP6.89□□□□□ -1.31
TARDBP-208ENST00000477447 JUNDP17535 347 aa6.89□□□□□ -1.31
TARDBP-208ENST00000477447 C14orf37Q86TY3 774 aa6.89□□□□□ -1.31
TARDBP-208ENST00000477447 FAM160A2Q8N612 972 aaPredicted RBP6.89□□□□□ -1.31
TARDBP-208ENST00000477447 SLC6A16Q9GZN6 736 aa6.88□□□□□ -1.31
TARDBP-208ENST00000477447 SNRKQ9NRH2 765 aa6.88□□□□□ -1.31
TARDBP-208ENST00000477447 PER1O15534 1290 aaPredicted RBP6.87□□□□□ -1.31
TARDBP-208ENST00000477447 DXOO77932 396 aaKnown RBP6.87□□□□□ -1.31
TARDBP-208ENST00000477447 S1PR4O95977 384 aa6.87□□□□□ -1.31
TARDBP-208ENST00000477447 DESI1Q6ICB0 168 aa6.87□□□□□ -1.31
TARDBP-208ENST00000477447 MTMR14Q8NCE2 650 aa6.87□□□□□ -1.31
TARDBP-208ENST00000477447 LRRN4Q8WUT4 740 aa6.87□□□□□ -1.31
TARDBP-208ENST00000477447 MMP16P51512 607 aa6.86□□□□□ -1.31
TARDBP-208ENST00000477447 HMX1Q9NP08 348 aaPredicted RBP6.86□□□□□ -1.31
TARDBP-208ENST00000477447 TIMELESSQ9UNS1 1208 aa6.86□□□□□ -1.31
TARDBP-208ENST00000477447 UBTFP17480 764 aaKnown RBP6.85□□□□□ -1.31
TARDBP-208ENST00000477447 PTPRNQ16849 979 aa6.85□□□□□ -1.31
TARDBP-208ENST00000477447 LYPD8Q6UX82 237 aa6.85□□□□□ -1.31
TARDBP-208ENST00000477447 APBB1O00213 710 aa6.84□□□□□ -1.31
TARDBP-208ENST00000477447 CCNYL3P0C7X3 344 aa6.84□□□□□ -1.31
TARDBP-208ENST00000477447 NUDT12Q9BQG2 462 aa6.84□□□□□ -1.31
TARDBP-208ENST00000477447 CTHP32929 405 aa6.83□□□□□ -1.32
TARDBP-208ENST00000477447 CCDC24Q8N4L8 307 aa6.83□□□□□ -1.32
TARDBP-208ENST00000477447 MAP10Q9P2G4 905 aa6.83□□□□□ -1.32
TARDBP-208ENST00000477447 FCF1Q9Y324 198 aaKnown RBP6.83□□□□□ -1.32
TARDBP-208ENST00000477447 SOCS7O14512 581 aa6.82□□□□□ -1.32
TARDBP-208ENST00000477447 PPEF1O14829 653 aaPredicted RBP6.82□□□□□ -1.32
TARDBP-208ENST00000477447 GGCXP38435 758 aa6.82□□□□□ -1.32
TARDBP-208ENST00000477447 NR6A1Q15406 480 aa6.82□□□□□ -1.32
TARDBP-208ENST00000477447 ERICH6Q7L0X2 663 aa6.82□□□□□ -1.32
TARDBP-208ENST00000477447 POM121Q96HA1 1249 aa6.82□□□□□ -1.32
TARDBP-208ENST00000477447 GJD4Q96KN9 370 aaPredicted RBP6.82□□□□□ -1.32
TARDBP-208ENST00000477447 RAD21O60216 631 aa6.81□□□□□ -1.32
TARDBP-208ENST00000477447 F12P00748 615 aaPredicted RBP6.81□□□□□ -1.32
TARDBP-208ENST00000477447 EPS8L1Q8TE68 723 aa6.81□□□□□ -1.32
TARDBP-208ENST00000477447 CLUAP1Q96AJ1 413 aa6.81□□□□□ -1.32
TARDBP-208ENST00000477447 TRIM34Q9BYJ4 488 aa6.81□□□□□ -1.32
TARDBP-208ENST00000477447 PLA2G2EQ9NZK7 142 aa6.81□□□□□ -1.32
TARDBP-208ENST00000477447 RNF223E7ERA6 249 aa6.8□□□□□ -1.32
TARDBP-208ENST00000477447 PPP1R18Q6NYC8 613 aa6.8□□□□□ -1.32
TARDBP-208ENST00000477447 GDPD2Q9HCC8 539 aa6.8□□□□□ -1.32
TARDBP-208ENST00000477447 PRM3Q9NNZ6 103 aa6.8□□□□□ -1.32
TARDBP-208ENST00000477447 TBC1D2BQ9UPU7 963 aa6.8□□□□□ -1.32
TARDBP-208ENST00000477447 COG6Q9Y2V7 657 aa6.8□□□□□ -1.32
TARDBP-208ENST00000477447 NDUFB9Q9Y6M9 179 aa6.8□□□□□ -1.32
TARDBP-208ENST00000477447 KCNH2Q12809 1159 aa6.79□□□□□ -1.32
TARDBP-208ENST00000477447 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.79□□□□□ -1.32
TARDBP-208ENST00000477447 EVA1BQ9NVM1 165 aa6.79□□□□□ -1.32
TARDBP-208ENST00000477447 ABL2P42684 1182 aa6.78□□□□□ -1.32
TARDBP-208ENST00000477447 PNMA1Q8ND90 353 aa6.78□□□□□ -1.32
TARDBP-208ENST00000477447 IFFO2Q5TF58 517 aa6.77□□□□□ -1.33
TARDBP-208ENST00000477447 ANKLE1Q8NAG6 615 aa6.77□□□□□ -1.33
TARDBP-208ENST00000477447 ZMYND15Q9H091 742 aa6.77□□□□□ -1.33
TARDBP-208ENST00000477447 UNC93B1Q9H1C4 597 aa6.77□□□□□ -1.33
TARDBP-208ENST00000477447 PLA2G2CQ5R387 149 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms