RNA–Protein interactions for RNA: ENST00000477403.1

RPL39-203, Transcript of ribosomal protein L39, humanhuman

TSL 3

Gene RPL39, Length 405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-203ENST00000477403 NDUFV2P19404 249 aa7.95□□□□□ -1.14
RPL39-203ENST00000477403 MSS51Q4VC12 460 aa7.95□□□□□ -1.14
RPL39-203ENST00000477403 FCF1Q9Y324 198 aaKnown RBP7.95□□□□□ -1.14
RPL39-203ENST00000477403 PLA2G2CQ5R387 149 aa7.94□□□□□ -1.14
RPL39-203ENST00000477403 EMID1Q96A84 441 aaPredicted RBP7.94□□□□□ -1.14
RPL39-203ENST00000477403 TBC1D2Q9BYX2 928 aa7.94□□□□□ -1.14
RPL39-203ENST00000477403 C6orf229H3BNL8 230 aa7.93□□□□□ -1.14
RPL39-203ENST00000477403 LIAT1Q6ZQX7 453 aa7.93□□□□□ -1.14
RPL39-203ENST00000477403 PCDHGC3Q9UN70 934 aa7.93□□□□□ -1.14
RPL39-203ENST00000477403 CCDC180Q9P1Z9 1646 aa7.92□□□□□ -1.14
RPL39-203ENST00000477403 DIXDC1Q155Q3 683 aa7.92□□□□□ -1.14
RPL39-203ENST00000477403 GFRA3O60609 400 aa7.91□□□□□ -1.14
RPL39-203ENST00000477403 SPRYD7Q5W111 196 aa7.91□□□□□ -1.14
RPL39-203ENST00000477403 MMP16P51512 607 aa7.9□□□□□ -1.14
RPL39-203ENST00000477403 RETREG3Q86VR2 466 aa7.9□□□□□ -1.14
RPL39-203ENST00000477403 DXOO77932 396 aaKnown RBP7.89□□□□□ -1.15
RPL39-203ENST00000477403 ZNF697Q5TEC3 545 aa7.89□□□□□ -1.15
RPL39-203ENST00000477403 RSBN1LQ6PCB5 846 aaPredicted RBP7.89□□□□□ -1.15
RPL39-203ENST00000477403 ZNF598Q86UK7 904 aaKnown RBP7.89□□□□□ -1.15
RPL39-203ENST00000477403 CCDC24Q8N4L8 307 aa7.89□□□□□ -1.15
RPL39-203ENST00000477403 GPBP1L1Q9HC44 474 aaPredicted RBP7.89□□□□□ -1.15
RPL39-203ENST00000477403 ZBTB24O43167 697 aaPredicted RBP7.88□□□□□ -1.15
RPL39-203ENST00000477403 JUNDP17535 347 aa7.88□□□□□ -1.15
RPL39-203ENST00000477403 MTMR2Q13614 643 aa7.88□□□□□ -1.15
RPL39-203ENST00000477403 CSPP1Q1MSJ5 1256 aa7.88□□□□□ -1.15
RPL39-203ENST00000477403 RIC3Q7Z5B4 369 aa7.88□□□□□ -1.15
RPL39-203ENST00000477403 PDZRN3Q9UPQ7 1066 aa7.88□□□□□ -1.15
RPL39-203ENST00000477403 LAPTM4AQ15012 233 aa7.87□□□□□ -1.15
RPL39-203ENST00000477403 Q6ZNB5 142 aa7.87□□□□□ -1.15
RPL39-203ENST00000477403 KDM4CQ9H3R0 1056 aa7.87□□□□□ -1.15
RPL39-203ENST00000477403 PCDHB15Q9Y5E8 787 aa7.87□□□□□ -1.15
RPL39-203ENST00000477403 SPTLC1O15269 473 aa7.86□□□□□ -1.15
RPL39-203ENST00000477403 RPIAP49247 311 aa7.86□□□□□ -1.15
RPL39-203ENST00000477403 MYSM1Q5VVJ2 828 aa7.86□□□□□ -1.15
RPL39-203ENST00000477403 NRG2O14511 850 aaPredicted RBP7.85□□□□□ -1.15
RPL39-203ENST00000477403 CD2BP2O95400 341 aaKnown RBP7.85□□□□□ -1.15
RPL39-203ENST00000477403 GJA5P36382 358 aa7.85□□□□□ -1.15
RPL39-203ENST00000477403 TPRNQ4KMQ1 711 aa7.85□□□□□ -1.15
RPL39-203ENST00000477403 PRR7Q8TB68 274 aa7.85□□□□□ -1.15
RPL39-203ENST00000477403 SPDYE5A6NIY4 337 aa7.84□□□□□ -1.15
RPL39-203ENST00000477403 TNFRSF10AO00220 468 aa7.84□□□□□ -1.15
RPL39-203ENST00000477403 FOXC1Q12948 553 aa7.84□□□□□ -1.15
RPL39-203ENST00000477403 TRIM67Q6ZTA4 783 aa7.84□□□□□ -1.15
RPL39-203ENST00000477403 NUDT12Q9BQG2 462 aa7.84□□□□□ -1.15
RPL39-203ENST00000477403 ZBTB3Q9H5J0 574 aa7.84□□□□□ -1.15
RPL39-203ENST00000477403 LIMD1Q9UGP4 676 aa7.84□□□□□ -1.15
RPL39-203ENST00000477403 HRCP23327 699 aa7.83□□□□□ -1.16
RPL39-203ENST00000477403 CABLES1Q8TDN4 633 aa7.83□□□□□ -1.16
RPL39-203ENST00000477403 FAM117AQ9C073 453 aa7.83□□□□□ -1.16
RPL39-203ENST00000477403 RSPH6AQ9H0K4 717 aa7.83□□□□□ -1.16
RPL39-203ENST00000477403 POLR3EQ9NVU0 708 aa7.83□□□□□ -1.16
RPL39-203ENST00000477403 CLK2P49760 499 aaKnown RBP7.82□□□□□ -1.16
RPL39-203ENST00000477403 TRIM32Q13049 653 aa7.82□□□□□ -1.16
RPL39-203ENST00000477403 NUTM2BA6NNL0 878 aaPredicted RBP7.81□□□□□ -1.16
RPL39-203ENST00000477403 NUTM2EB1AL46 878 aaPredicted RBP7.81□□□□□ -1.16
RPL39-203ENST00000477403 GDF9O60383 454 aa7.81□□□□□ -1.16
RPL39-203ENST00000477403 NEUROD2Q15784 382 aa7.81□□□□□ -1.16
RPL39-203ENST00000477403 NUTM2DQ5VT03 806 aaPredicted RBP7.81□□□□□ -1.16
RPL39-203ENST00000477403 PRPF38BQ5VTL8 546 aaKnown RBP7.81□□□□□ -1.16
RPL39-203ENST00000477403 NUTM2AQ8IVF1 878 aaPredicted RBP7.81□□□□□ -1.16
RPL39-203ENST00000477403 TSC1Q92574 1164 aa7.81□□□□□ -1.16
RPL39-203ENST00000477403 DDRGK1Q96HY6 314 aa7.81□□□□□ -1.16
RPL39-203ENST00000477403 ATP1B4Q9UN42 357 aaPredicted RBP7.81□□□□□ -1.16
RPL39-203ENST00000477403 CFAP99D6REC4 459 aa7.8□□□□□ -1.16
RPL39-203ENST00000477403 CCNYL3P0C7X3 344 aa7.8□□□□□ -1.16
RPL39-203ENST00000477403 PRR20EP86478 221 aa7.8□□□□□ -1.16
RPL39-203ENST00000477403 PRR20CP86479 221 aa7.8□□□□□ -1.16
RPL39-203ENST00000477403 PRR20DP86480 221 aa7.8□□□□□ -1.16
RPL39-203ENST00000477403 PRR20BP86481 221 aa7.8□□□□□ -1.16
RPL39-203ENST00000477403 PRR20AP86496 221 aa7.8□□□□□ -1.16
RPL39-203ENST00000477403 QPCTQ16769 361 aa7.8□□□□□ -1.16
RPL39-203ENST00000477403 PKD2L1Q9P0L9 805 aa7.8□□□□□ -1.16
RPL39-203ENST00000477403 PTPRNQ16849 979 aa7.79□□□□□ -1.16
RPL39-203ENST00000477403 DESI1Q6ICB0 168 aa7.79□□□□□ -1.16
RPL39-203ENST00000477403 TUSC1Q2TAM9 212 aa7.78□□□□□ -1.16
RPL39-203ENST00000477403 PTCRAQ6ISU1 281 aaPredicted RBP7.78□□□□□ -1.16
RPL39-203ENST00000477403 LILRB3O75022 631 aa7.77□□□□□ -1.17
RPL39-203ENST00000477403 PKDCCQ504Y2 493 aa7.77□□□□□ -1.17
RPL39-203ENST00000477403 PLEKHG3A1L390 1219 aa7.76□□□□□ -1.17
RPL39-203ENST00000477403 FAM187AA6NFU0 413 aa7.76□□□□□ -1.17
RPL39-203ENST00000477403 CTHP32929 405 aa7.76□□□□□ -1.17
RPL39-203ENST00000477403 KCNH2Q12809 1159 aa7.76□□□□□ -1.17
RPL39-203ENST00000477403 SKIV2LQ15477 1246 aaKnown RBP7.76□□□□□ -1.17
RPL39-203ENST00000477403 SH3D19Q5HYK7 790 aa7.76□□□□□ -1.17
RPL39-203ENST00000477403 RTL5Q5HYW3 569 aaPredicted RBP7.76□□□□□ -1.17
RPL39-203ENST00000477403 TRAF7Q6Q0C0 670 aa7.76□□□□□ -1.17
RPL39-203ENST00000477403 EVA1BQ9NVM1 165 aa7.76□□□□□ -1.17
RPL39-203ENST00000477403 SKOR1P84550 965 aa7.75□□□□□ -1.17
RPL39-203ENST00000477403 LYPD8Q6UX82 237 aa7.75□□□□□ -1.17
RPL39-203ENST00000477403 CYP4X1Q8N118 509 aa7.75□□□□□ -1.17
RPL39-203ENST00000477403 UNC93B1Q9H1C4 597 aa7.75□□□□□ -1.17
RPL39-203ENST00000477403 WNT7AO00755 349 aa7.74□□□□□ -1.17
RPL39-203ENST00000477403 WNT7BP56706 349 aa7.74□□□□□ -1.17
RPL39-203ENST00000477403 RC3H1Q5TC82 1133 aaKnown RBP7.74□□□□□ -1.17
RPL39-203ENST00000477403 PROCA1Q8NCQ7 364 aaPredicted RBP7.74□□□□□ -1.17
RPL39-203ENST00000477403 HELBQ8NG08 1087 aaPredicted RBP7.74□□□□□ -1.17
RPL39-203ENST00000477403 TTC24A2A3L6 582 aaPredicted RBP7.73□□□□□ -1.17
RPL39-203ENST00000477403 LCE2BO14633 110 aa7.73□□□□□ -1.17
RPL39-203ENST00000477403 PER1O15534 1290 aaPredicted RBP7.73□□□□□ -1.17
RPL39-203ENST00000477403 BRPF1P55201 1214 aaPredicted RBP7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms