RNA–Protein interactions for RNA: ENST00000477069.5

NUP188-205, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 2,941 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-205ENST00000477069 B4GALNT3Q6L9W6 998 aa15.31■□□□□ 0.04
NUP188-205ENST00000477069 WDR43Q15061 677 aaKnown RBP eCLIP15.31■□□□□ 0.04
NUP188-205ENST00000477069 ANKRD26Q9UPS8 1709 aa15.31■□□□□ 0.04
NUP188-205ENST00000477069 ANKRD36BQ8N2N9 1353 aa15.31■□□□□ 0.04
NUP188-205ENST00000477069 RRP1P56182 461 aaKnown RBP15.3■□□□□ 0.04
NUP188-205ENST00000477069 RCAN3Q9UKA8 241 aa15.3■□□□□ 0.04
NUP188-205ENST00000477069 DLC1Q96QB1 1528 aa15.3■□□□□ 0.04
NUP188-205ENST00000477069 NINLQ9Y2I6 1382 aa15.28■□□□□ 0.04
NUP188-205ENST00000477069 NSD2O96028 1365 aa15.27■□□□□ 0.04
NUP188-205ENST00000477069 RIMS2Q9UQ26 1411 aa15.27■□□□□ 0.03
NUP188-205ENST00000477069 CD163L1Q9NR16 1453 aa15.26■□□□□ 0.03
NUP188-205ENST00000477069 RBM19Q9Y4C8 960 aaKnown RBP15.26■□□□□ 0.03
NUP188-205ENST00000477069 KNDC1Q76NI1 1749 aa15.26■□□□□ 0.03
NUP188-205ENST00000477069 CABP2Q9NPB3 220 aa15.24■□□□□ 0.03
NUP188-205ENST00000477069 UBR1Q8IWV7 1749 aa15.24■□□□□ 0.03
NUP188-205ENST00000477069 CGNL1Q0VF96 1302 aa15.24■□□□□ 0.03
NUP188-205ENST00000477069 A0A1W2PP64 1363 aa15.24■□□□□ 0.03
NUP188-205ENST00000477069 ABCC11Q96J66 1382 aa15.24■□□□□ 0.03
NUP188-205ENST00000477069 STK26Q9P289 416 aa15.23■□□□□ 0.03
NUP188-205ENST00000477069 ZMYM3Q14202 1370 aa15.23■□□□□ 0.03
NUP188-205ENST00000477069 DUSP27Q5VZP5 1158 aa15.23■□□□□ 0.03
NUP188-205ENST00000477069 IQSEC2Q5JU85 1478 aa15.23■□□□□ 0.03
NUP188-205ENST00000477069 KIF20BQ96Q89 1820 aa15.23■□□□□ 0.03
NUP188-205ENST00000477069 NLRP1Q9C000 1473 aa15.23■□□□□ 0.03
NUP188-205ENST00000477069 ATAD2Q6PL18 1390 aa15.23■□□□□ 0.03
NUP188-205ENST00000477069 MORC1Q86VD1 984 aa15.23■□□□□ 0.03
NUP188-205ENST00000477069 TRMT2AQ8IZ69 625 aaKnown RBP15.22■□□□□ 0.03
NUP188-205ENST00000477069 PRAM1Q96QH2 718 aa15.22■□□□□ 0.03
NUP188-205ENST00000477069 MED14O60244 1454 aa15.22■□□□□ 0.03
NUP188-205ENST00000477069 MLECQ14165 292 aa15.21■□□□□ 0.03
NUP188-205ENST00000477069 SAFB2Q14151 953 aaKnown RBP eCLIP15.21■□□□□ 0.03
NUP188-205ENST00000477069 CCDC146Q8IYE0 955 aa15.21■□□□□ 0.03
NUP188-205ENST00000477069 STAG3Q9UJ98 1225 aa15.2■□□□□ 0.02
NUP188-205ENST00000477069 GOLGA2Q08379 1002 aa15.2■□□□□ 0.02
NUP188-205ENST00000477069 SLFN5Q08AF3 891 aa15.19■□□□□ 0.02
NUP188-205ENST00000477069 CCDC136Q96JN2 1154 aa15.19■□□□□ 0.02
NUP188-205ENST00000477069 SENP3Q9H4L4 574 aaPredicted RBP15.19■□□□□ 0.02
NUP188-205ENST00000477069 EXOC6Q8TAG9 804 aa15.19■□□□□ 0.02
NUP188-205ENST00000477069 MINK1Q8N4C8 1332 aaPredicted RBP15.18■□□□□ 0.02
NUP188-205ENST00000477069 APAF1O14727 1248 aa15.18■□□□□ 0.02
NUP188-205ENST00000477069 NGEFQ8N5V2 710 aa15.18■□□□□ 0.02
NUP188-205ENST00000477069 COL3A1P02461 1466 aaPredicted RBP15.18■□□□□ 0.02
NUP188-205ENST00000477069 ADGRB2O60241 1585 aa15.18■□□□□ 0.02
NUP188-205ENST00000477069 CPS1P31327 1500 aa15.18■□□□□ 0.02
NUP188-205ENST00000477069 SRPK2P78362 688 aaKnown RBP15.17■□□□□ 0.02
NUP188-205ENST00000477069 POGKQ9P215 609 aa15.16■□□□□ 0.02
NUP188-205ENST00000477069 TNRQ92752 1358 aa15.16■□□□□ 0.02
NUP188-205ENST00000477069 TECPR2O15040 1411 aa15.16■□□□□ 0.02
NUP188-205ENST00000477069 ATP7BP35670 1465 aa15.16■□□□□ 0.02
NUP188-205ENST00000477069 NKTRP30414 1462 aaKnown RBP15.15■□□□□ 0.02
NUP188-205ENST00000477069 MTHFSP49914 203 aa15.15■□□□□ 0.02
NUP188-205ENST00000477069 SPINK5Q9NQ38 1064 aaPredicted RBP15.15■□□□□ 0.02
NUP188-205ENST00000477069 TNNT2P45379 298 aaPredicted RBP15.15■□□□□ 0.02
NUP188-205ENST00000477069 METP08581 1390 aa15.15■□□□□ 0.02
NUP188-205ENST00000477069 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.14■□□□□ 0.01
NUP188-205ENST00000477069 CDK19Q9BWU1 502 aa15.14■□□□□ 0.01
NUP188-205ENST00000477069 C3P01024 1663 aa15.14■□□□□ 0.01
NUP188-205ENST00000477069 PLIN1O60240 522 aa15.13■□□□□ 0.01
NUP188-205ENST00000477069 PHF23Q9BUL5 403 aaPredicted RBP15.13■□□□□ 0.01
NUP188-205ENST00000477069 DMRT2Q9Y5R5 561 aa15.13■□□□□ 0.01
NUP188-205ENST00000477069 MON2Q7Z3U7 1717 aa15.13■□□□□ 0.01
NUP188-205ENST00000477069 TERF2IPQ9NYB0 399 aa15.13■□□□□ 0.01
NUP188-205ENST00000477069 FAM135BQ49AJ0 1406 aa15.12■□□□□ 0.01
NUP188-205ENST00000477069 TMEM2Q9UHN6 1383 aa15.12■□□□□ 0.01
NUP188-205ENST00000477069 E9PSI1 815 aa15.12■□□□□ 0.01
NUP188-205ENST00000477069 AKAP12Q02952 1782 aa15.12■□□□□ 0.01
NUP188-205ENST00000477069 RUNDC1Q96C34 613 aa15.12■□□□□ 0.01
NUP188-205ENST00000477069 FYB1O15117 783 aa15.11■□□□□ 0.01
NUP188-205ENST00000477069 ESF1Q9H501 851 aaKnown RBP15.11■□□□□ 0.01
NUP188-205ENST00000477069 WAPLQ7Z5K2 1190 aa15.11■□□□□ 0.01
NUP188-205ENST00000477069 CFAP53Q96M91 514 aa15.11■□□□□ 0.01
NUP188-205ENST00000477069 WWC1Q8IX03 1113 aa15.1■□□□□ 0.01
NUP188-205ENST00000477069 CDC42BPGQ6DT37 1551 aa15.1■□□□□ 0.01
NUP188-205ENST00000477069 NCBP3Q53F19 620 aaKnown RBP15.1■□□□□ 0.01
NUP188-205ENST00000477069 SIRT1Q96EB6 747 aa15.1■□□□□ 0.01
NUP188-205ENST00000477069 FER1L4A9Z1Z3 1794 aa15.1■□□□□ 0.01
NUP188-205ENST00000477069 FANCIQ9NVI1 1328 aa15.1■□□□□ 0.01
NUP188-205ENST00000477069 CRBNQ96SW2 442 aa15.1■□□□□ 0.01
NUP188-205ENST00000477069 CPSF1Q10570 1443 aaKnown RBP15.09■□□□□ 0.01
NUP188-205ENST00000477069 ADAMTS13Q76LX8 1427 aa15.09■□□□□ 0.01
NUP188-205ENST00000477069 C20orf194Q5TEA3 1177 aa15.09■□□□□ 0.01
NUP188-205ENST00000477069 GGNBP2Q9H3C7 697 aa15.09■□□□□ 0.01
NUP188-205ENST00000477069 CABP1Q9NZU7 370 aa15.09■□□□□ 0.01
NUP188-205ENST00000477069 ITSN1Q15811 1721 aa15.08■□□□□ 0
NUP188-205ENST00000477069 PNPLA6Q8IY17 1366 aa15.08■□□□□ 0
NUP188-205ENST00000477069 TOPAZ1Q8N9V7 1692 aa15.08■□□□□ 0
NUP188-205ENST00000477069 HDGFL2Q7Z4V5 671 aaPredicted RBP15.08■□□□□ 0
NUP188-205ENST00000477069 CCDC27Q2M243 656 aa15.07■□□□□ 0
NUP188-205ENST00000477069 TCP11L2Q8N4U5 519 aa15.07■□□□□ 0
NUP188-205ENST00000477069 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.07■□□□□ 0
NUP188-205ENST00000477069 SLIT1O75093 1534 aa15.06■□□□□ 0
NUP188-205ENST00000477069 PLEKHG1Q9ULL1 1385 aa15.06■□□□□ 0
NUP188-205ENST00000477069 HDGFP51858 240 aaKnown RBP15.06■□□□□ 0
NUP188-205ENST00000477069 NRKQ7Z2Y5 1582 aa15.05■□□□□ 0
NUP188-205ENST00000477069 MAP2P11137 1827 aaKnown RBP15.05■□□□□ 0
NUP188-205ENST00000477069 WASLO00401 505 aaPredicted RBP15.05■□□□□ 0
NUP188-205ENST00000477069 PPIP5K1Q6PFW1 1433 aa15.05■□□□□ -0
NUP188-205ENST00000477069 ARHGAP23Q9P227 1491 aa15.05■□□□□ -0
NUP188-205ENST00000477069 EDC4Q6P2E9 1401 aaKnown RBP15.04■□□□□ -0
NUP188-205ENST00000477069 WDR63Q8IWG1 891 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms