RNA–Protein interactions for RNA: ENST00000476983.5

CLK2-205, Transcript of CDC like kinase 2, humanhuman

TSL 1 (best)

Gene CLK2, Length 1,885 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-205ENST00000476983 FAM135BQ49AJ0 1406 aa27.34■■□□□ 1.97
CLK2-205ENST00000476983 XRN1Q8IZH2 1706 aaKnown RBP27.34■■□□□ 1.97
CLK2-205ENST00000476983 ANP32CO43423 234 aa27.33■■□□□ 1.97
CLK2-205ENST00000476983 SIRT1Q96EB6 747 aa27.3■■□□□ 1.96
CLK2-205ENST00000476983 CABP2Q9NPB3 220 aa27.3■■□□□ 1.96
CLK2-205ENST00000476983 CHD2O14647 1828 aaKnown RBP27.3■■□□□ 1.96
CLK2-205ENST00000476983 PIK3R4Q99570 1358 aa27.3■■□□□ 1.96
CLK2-205ENST00000476983 PANK3Q9H999 370 aa27.29■■□□□ 1.96
CLK2-205ENST00000476983 SRPK2P78362 688 aaKnown RBP27.28■■□□□ 1.96
CLK2-205ENST00000476983 PTCH1Q13635 1447 aa27.28■■□□□ 1.96
CLK2-205ENST00000476983 CNGB1Q14028 1251 aaPredicted RBP27.27■■□□□ 1.96
CLK2-205ENST00000476983 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.27■■□□□ 1.96
CLK2-205ENST00000476983 KCNA6P17658 529 aa27.26■■□□□ 1.95
CLK2-205ENST00000476983 CDK19Q9BWU1 502 aa27.25■■□□□ 1.95
CLK2-205ENST00000476983 TMC1Q8TDI8 760 aa27.24■■□□□ 1.95
CLK2-205ENST00000476983 PUS7Q96PZ0 661 aaKnown RBP27.21■■□□□ 1.95
CLK2-205ENST00000476983 STRCQ7RTU9 1775 aa27.21■■□□□ 1.95
CLK2-205ENST00000476983 SLC12A5Q9H2X9 1139 aa27.2■■□□□ 1.94
CLK2-205ENST00000476983 ADGRB2O60241 1585 aa27.19■■□□□ 1.94
CLK2-205ENST00000476983 WASLO00401 505 aaPredicted RBP27.19■■□□□ 1.94
CLK2-205ENST00000476983 PER1O15534 1290 aaPredicted RBP27.19■■□□□ 1.94
CLK2-205ENST00000476983 ATAD2Q6PL18 1390 aa27.18■■□□□ 1.94
CLK2-205ENST00000476983 PRKRIP1Q9H875 184 aaPredicted RBP27.17■■□□□ 1.94
CLK2-205ENST00000476983 NWD1Q149M9 1564 aa27.16■■□□□ 1.94
CLK2-205ENST00000476983 RBM33Q96EV2 1170 aaKnown RBP27.13■■□□□ 1.93
CLK2-205ENST00000476983 KNSTRNQ9Y448 316 aa27.12■■□□□ 1.93
CLK2-205ENST00000476983 NALCNQ8IZF0 1738 aa27.11■■□□□ 1.93
CLK2-205ENST00000476983 CARD14Q9BXL6 1004 aa27.1■■□□□ 1.93
CLK2-205ENST00000476983 CC2D1BQ5T0F9 858 aaKnown RBP27.1■■□□□ 1.93
CLK2-205ENST00000476983 NINLQ9Y2I6 1382 aa27.09■■□□□ 1.93
CLK2-205ENST00000476983 STRCP1A6NGW2 1772 aa27.09■■□□□ 1.93
CLK2-205ENST00000476983 NUTM2FA1L443 756 aa27.08■■□□□ 1.93
CLK2-205ENST00000476983 KTN1Q86UP2 1357 aaKnown RBP27.08■■□□□ 1.93
CLK2-205ENST00000476983 ANKRD36BQ8N2N9 1353 aa27.08■■□□□ 1.93
CLK2-205ENST00000476983 NSD3Q9BZ95 1437 aa27.08■■□□□ 1.93
CLK2-205ENST00000476983 NUDT16Q96DE0 195 aaKnown RBP27.08■■□□□ 1.93
CLK2-205ENST00000476983 CABP1Q9NZU7 370 aa27.08■■□□□ 1.93
CLK2-205ENST00000476983 ATP7BP35670 1465 aa27.07■■□□□ 1.92
CLK2-205ENST00000476983 PRR36Q9H6K5 1346 aa27.07■■□□□ 1.92
CLK2-205ENST00000476983 CCER2I3L3R5 266 aa27.06■■□□□ 1.92
CLK2-205ENST00000476983 A0A1W2PP64 1363 aa27.06■■□□□ 1.92
CLK2-205ENST00000476983 PPIP5K1Q6PFW1 1433 aa27.06■■□□□ 1.92
CLK2-205ENST00000476983 CD163L1Q9NR16 1453 aa27.05■■□□□ 1.92
CLK2-205ENST00000476983 NKTRP30414 1462 aaKnown RBP27.04■■□□□ 1.92
CLK2-205ENST00000476983 AMER1Q5JTC6 1135 aaPredicted RBP27.04■■□□□ 1.92
CLK2-205ENST00000476983 USP32Q8NFA0 1604 aa27.03■■□□□ 1.92
CLK2-205ENST00000476983 TOPAZ1Q8N9V7 1692 aa27.03■■□□□ 1.92
CLK2-205ENST00000476983 PROSER2Q86WR7 435 aaPredicted RBP27.02■■□□□ 1.92
CLK2-205ENST00000476983 FMN2Q9NZ56 1722 aa27.02■■□□□ 1.92
CLK2-205ENST00000476983 PARD3Q8TEW0 1356 aa27.01■■□□□ 1.91
CLK2-205ENST00000476983 TERF2IPQ9NYB0 399 aa27.01■■□□□ 1.91
CLK2-205ENST00000476983 ADGRL3Q9HAR2 1447 aa27.01■■□□□ 1.91
CLK2-205ENST00000476983 RGPD8O14715 1765 aaPredicted RBP27.01■■□□□ 1.91
CLK2-205ENST00000476983 RALBP1Q15311 655 aa27■■□□□ 1.91
CLK2-205ENST00000476983 C14orf37Q86TY3 774 aa27■■□□□ 1.91
CLK2-205ENST00000476983 CCDC61Q9Y6R9 512 aa27■■□□□ 1.91
CLK2-205ENST00000476983 CDC42BPGQ6DT37 1551 aa27■■□□□ 1.91
CLK2-205ENST00000476983 HDGFL2Q7Z4V5 671 aaPredicted RBP27■■□□□ 1.91
CLK2-205ENST00000476983 CCDC184Q52MB2 194 aa26.99■■□□□ 1.91
CLK2-205ENST00000476983 ITSN1Q15811 1721 aa26.98■■□□□ 1.91
CLK2-205ENST00000476983 YTHDC1Q96MU7 727 aaKnown RBP26.96■■□□□ 1.91
CLK2-205ENST00000476983 MYBBP1AQ9BQG0 1328 aaKnown RBP26.95■■□□□ 1.91
CLK2-205ENST00000476983 NPC1L1Q9UHC9 1359 aa26.95■■□□□ 1.9
CLK2-205ENST00000476983 AKAP12Q02952 1782 aa26.94■■□□□ 1.9
CLK2-205ENST00000476983 CGNL1Q0VF96 1302 aa26.93■■□□□ 1.9
CLK2-205ENST00000476983 ZNF335Q9H4Z2 1342 aaPredicted RBP26.93■■□□□ 1.9
CLK2-205ENST00000476983 TMEM94Q12767 1356 aa26.92■■□□□ 1.9
CLK2-205ENST00000476983 CPSF1Q10570 1443 aaKnown RBP26.92■■□□□ 1.9
CLK2-205ENST00000476983 MRS2Q9HD23 443 aa26.92■■□□□ 1.9
CLK2-205ENST00000476983 ANKARQ7Z5J8 1434 aa26.92■■□□□ 1.9
CLK2-205ENST00000476983 MON2Q7Z3U7 1717 aa26.91■■□□□ 1.9
CLK2-205ENST00000476983 PMFBP1Q8TBY8 1022 aa26.89■■□□□ 1.9
CLK2-205ENST00000476983 KIF20BQ96Q89 1820 aa26.88■■□□□ 1.89
CLK2-205ENST00000476983 ACEP12821 1306 aa26.88■■□□□ 1.89
CLK2-205ENST00000476983 PLEKHG3A1L390 1219 aa26.87■■□□□ 1.89
CLK2-205ENST00000476983 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.87■■□□□ 1.89
CLK2-205ENST00000476983 DMRT2Q9Y5R5 561 aa26.87■■□□□ 1.89
CLK2-205ENST00000476983 XIRP1Q702N8 1843 aaKnown RBP26.87■■□□□ 1.89
CLK2-205ENST00000476983 EDC4Q6P2E9 1401 aaKnown RBP26.85■■□□□ 1.89
CLK2-205ENST00000476983 MORC1Q86VD1 984 aa26.85■■□□□ 1.89
CLK2-205ENST00000476983 NLRP13Q86W25 1043 aa26.84■■□□□ 1.89
CLK2-205ENST00000476983 GGNBP2Q9H3C7 697 aa26.84■■□□□ 1.89
CLK2-205ENST00000476983 NSD2O96028 1365 aa26.84■■□□□ 1.89
CLK2-205ENST00000476983 ANKRD26Q9UPS8 1709 aa26.83■■□□□ 1.89
CLK2-205ENST00000476983 PPP2R1AP30153 589 aa26.83■■□□□ 1.89
CLK2-205ENST00000476983 C19orf44Q9H6X5 657 aa26.83■■□□□ 1.89
CLK2-205ENST00000476983 LRRC7Q96NW7 1537 aa26.83■■□□□ 1.89
CLK2-205ENST00000476983 NRKQ7Z2Y5 1582 aa26.82■■□□□ 1.88
CLK2-205ENST00000476983 BRD4O60885 1362 aaPredicted RBP26.82■■□□□ 1.88
CLK2-205ENST00000476983 FYB1O15117 783 aa26.82■■□□□ 1.88
CLK2-205ENST00000476983 TNNT2P45379 298 aaPredicted RBP26.82■■□□□ 1.88
CLK2-205ENST00000476983 NGDNQ8NEJ9 315 aaKnown RBP26.82■■□□□ 1.88
CLK2-205ENST00000476983 ZNF692Q9BU19 519 aaPredicted RBP26.82■■□□□ 1.88
CLK2-205ENST00000476983 NCOA3Q9Y6Q9 1424 aa26.81■■□□□ 1.88
CLK2-205ENST00000476983 USP6P35125 1406 aa26.8■■□□□ 1.88
CLK2-205ENST00000476983 POLR3AO14802 1390 aaPredicted RBP26.8■■□□□ 1.88
CLK2-205ENST00000476983 ESCO1Q5FWF5 840 aa26.79■■□□□ 1.88
CLK2-205ENST00000476983 FAM9BQ8IZU0 186 aa26.79■■□□□ 1.88
CLK2-205ENST00000476983 PHF8Q9UPP1 1060 aa26.78■■□□□ 1.88
CLK2-205ENST00000476983 ATF3P18847 181 aa26.77■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms