RNA–Protein interactions for RNA: ENST00000476825.2

SPTAN1-207, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 3

Gene SPTAN1, Length 635 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-207ENST00000476825 ITSN1Q15811 1721 aa13□□□□□ -0.33
SPTAN1-207ENST00000476825 TULP4Q9NRJ4 1543 aa13□□□□□ -0.33
SPTAN1-207ENST00000476825 TMEM94Q12767 1356 aa13□□□□□ -0.33
SPTAN1-207ENST00000476825 SIRT1Q96EB6 747 aa12.99□□□□□ -0.33
SPTAN1-207ENST00000476825 DCCP43146 1447 aa12.98□□□□□ -0.33
SPTAN1-207ENST00000476825 STK26Q9P289 416 aa12.98□□□□□ -0.33
SPTAN1-207ENST00000476825 USP47Q96K76 1375 aa12.97□□□□□ -0.33
SPTAN1-207ENST00000476825 SBNO2Q9Y2G9 1366 aa12.97□□□□□ -0.33
SPTAN1-207ENST00000476825 TRAK1Q9UPV9 953 aa12.97□□□□□ -0.33
SPTAN1-207ENST00000476825 EIF3AQ14152 1382 aaKnown RBP12.96□□□□□ -0.33
SPTAN1-207ENST00000476825 MYOM1P52179 1685 aa12.96□□□□□ -0.33
SPTAN1-207ENST00000476825 CARD11Q9BXL7 1154 aa12.96□□□□□ -0.33
SPTAN1-207ENST00000476825 WAPLQ7Z5K2 1190 aa12.95□□□□□ -0.34
SPTAN1-207ENST00000476825 PROSER2Q86WR7 435 aaPredicted RBP12.95□□□□□ -0.34
SPTAN1-207ENST00000476825 PRAM1Q96QH2 718 aa12.95□□□□□ -0.34
SPTAN1-207ENST00000476825 KIF1AQ12756 1690 aa12.94□□□□□ -0.34
SPTAN1-207ENST00000476825 RBM33Q96EV2 1170 aaKnown RBP12.94□□□□□ -0.34
SPTAN1-207ENST00000476825 NHSL1Q5SYE7 1610 aa12.94□□□□□ -0.34
SPTAN1-207ENST00000476825 CENPJQ9HC77 1338 aaPredicted RBP12.93□□□□□ -0.34
SPTAN1-207ENST00000476825 ROBO1Q9Y6N7 1651 aa12.93□□□□□ -0.34
SPTAN1-207ENST00000476825 AKAP12Q02952 1782 aa12.93□□□□□ -0.34
SPTAN1-207ENST00000476825 MST1RQ04912 1400 aa12.93□□□□□ -0.34
SPTAN1-207ENST00000476825 ATP7BP35670 1465 aa12.92□□□□□ -0.34
SPTAN1-207ENST00000476825 MSH6P52701 1360 aa12.92□□□□□ -0.34
SPTAN1-207ENST00000476825 ZEB1P37275 1124 aaPredicted RBP12.91□□□□□ -0.34
SPTAN1-207ENST00000476825 CERKQ8TCT0 537 aa12.91□□□□□ -0.34
SPTAN1-207ENST00000476825 TESK2Q96S53 571 aa12.9□□□□□ -0.34
SPTAN1-207ENST00000476825 MON2Q7Z3U7 1717 aa12.9□□□□□ -0.34
SPTAN1-207ENST00000476825 SAFB2Q14151 953 aaKnown RBP eCLIP12.89□□□□□ -0.35
SPTAN1-207ENST00000476825 POGKQ9P215 609 aa12.89□□□□□ -0.35
SPTAN1-207ENST00000476825 ANKARQ7Z5J8 1434 aa12.88□□□□□ -0.35
SPTAN1-207ENST00000476825 ST20-MTHFSA0A0A6YYL1 179 aa12.88□□□□□ -0.35
SPTAN1-207ENST00000476825 C19orf44Q9H6X5 657 aa12.88□□□□□ -0.35
SPTAN1-207ENST00000476825 C1orf167Q5SNV9 1468 aa12.88□□□□□ -0.35
SPTAN1-207ENST00000476825 NRKQ7Z2Y5 1582 aa12.88□□□□□ -0.35
SPTAN1-207ENST00000476825 TRPM3Q9HCF6 1732 aaPredicted RBP12.88□□□□□ -0.35
SPTAN1-207ENST00000476825 MINK1Q8N4C8 1332 aaPredicted RBP12.88□□□□□ -0.35
SPTAN1-207ENST00000476825 AHDC1Q5TGY3 1603 aaPredicted RBP12.87□□□□□ -0.35
SPTAN1-207ENST00000476825 DISP3Q9P2K9 1392 aa12.86□□□□□ -0.35
SPTAN1-207ENST00000476825 HSPA5P11021 654 aaKnown RBP12.86□□□□□ -0.35
SPTAN1-207ENST00000476825 MAPK8IP2Q13387 824 aaPredicted RBP12.86□□□□□ -0.35
SPTAN1-207ENST00000476825 PRR36Q9H6K5 1346 aa12.86□□□□□ -0.35
SPTAN1-207ENST00000476825 PHLPP1O60346 1717 aa12.85□□□□□ -0.35
SPTAN1-207ENST00000476825 COL16A1Q07092 1604 aaPredicted RBP12.85□□□□□ -0.35
SPTAN1-207ENST00000476825 EIF4G2P78344 907 aaKnown RBP eCLIP12.85□□□□□ -0.35
SPTAN1-207ENST00000476825 HIRIP3Q9BW71 556 aaPredicted RBP12.85□□□□□ -0.35
SPTAN1-207ENST00000476825 WASLO00401 505 aaPredicted RBP12.84□□□□□ -0.35
SPTAN1-207ENST00000476825 C14orf37Q86TY3 774 aa12.84□□□□□ -0.35
SPTAN1-207ENST00000476825 CADPS2Q86UW7 1296 aa12.84□□□□□ -0.35
SPTAN1-207ENST00000476825 MARF1Q9Y4F3 1742 aaKnown RBP12.83□□□□□ -0.36
SPTAN1-207ENST00000476825 ALS2Q96Q42 1657 aa12.83□□□□□ -0.36
SPTAN1-207ENST00000476825 CRYBG1Q9Y4K1 1723 aa12.82□□□□□ -0.36
SPTAN1-207ENST00000476825 USP54Q70EL1 1684 aa12.81□□□□□ -0.36
SPTAN1-207ENST00000476825 CD163L1Q9NR16 1453 aa12.81□□□□□ -0.36
SPTAN1-207ENST00000476825 ATF3P18847 181 aa12.81□□□□□ -0.36
SPTAN1-207ENST00000476825 CDK19Q9BWU1 502 aa12.81□□□□□ -0.36
SPTAN1-207ENST00000476825 ABCA3Q99758 1704 aa12.81□□□□□ -0.36
SPTAN1-207ENST00000476825 EVC2Q86UK5 1308 aa12.81□□□□□ -0.36
SPTAN1-207ENST00000476825 KIF20BQ96Q89 1820 aa12.81□□□□□ -0.36
SPTAN1-207ENST00000476825 PXDNQ92626 1479 aa12.8□□□□□ -0.36
SPTAN1-207ENST00000476825 ATAD2Q6PL18 1390 aa12.8□□□□□ -0.36
SPTAN1-207ENST00000476825 PPIP5K1Q6PFW1 1433 aa12.79□□□□□ -0.36
SPTAN1-207ENST00000476825 SHPRHQ149N8 1683 aa12.79□□□□□ -0.36
SPTAN1-207ENST00000476825 ANKRD26Q9UPS8 1709 aa12.79□□□□□ -0.36
SPTAN1-207ENST00000476825 COL22A1Q8NFW1 1626 aaPredicted RBP12.78□□□□□ -0.36
SPTAN1-207ENST00000476825 PIK3C2AO00443 1686 aa12.78□□□□□ -0.36
SPTAN1-207ENST00000476825 PUS7Q96PZ0 661 aaKnown RBP12.78□□□□□ -0.36
SPTAN1-207ENST00000476825 CABP2Q9NPB3 220 aa12.78□□□□□ -0.36
SPTAN1-207ENST00000476825 SLAIN2Q9P270 581 aa12.78□□□□□ -0.36
SPTAN1-207ENST00000476825 POLR3AO14802 1390 aaPredicted RBP12.78□□□□□ -0.36
SPTAN1-207ENST00000476825 NUTM2FA1L443 756 aa12.77□□□□□ -0.37
SPTAN1-207ENST00000476825 C11orf95C9JLR9 678 aaPredicted RBP12.77□□□□□ -0.37
SPTAN1-207ENST00000476825 UBAP1LF5GYI3 381 aa12.77□□□□□ -0.37
SPTAN1-207ENST00000476825 TOM1O60784 492 aa12.77□□□□□ -0.37
SPTAN1-207ENST00000476825 TMF1P82094 1093 aa12.77□□□□□ -0.37
SPTAN1-207ENST00000476825 BRINP3Q76B58 766 aa12.77□□□□□ -0.37
SPTAN1-207ENST00000476825 NUDT16Q96DE0 195 aaKnown RBP12.77□□□□□ -0.37
SPTAN1-207ENST00000476825 ORAI2Q96SN7 254 aa12.77□□□□□ -0.37
SPTAN1-207ENST00000476825 SLC24A1O60721 1099 aa12.76□□□□□ -0.37
SPTAN1-207ENST00000476825 SRPK2P78362 688 aaKnown RBP12.76□□□□□ -0.37
SPTAN1-207ENST00000476825 NINLQ9Y2I6 1382 aa12.76□□□□□ -0.37
SPTAN1-207ENST00000476825 CPSF1Q10570 1443 aaKnown RBP12.76□□□□□ -0.37
SPTAN1-207ENST00000476825 PHRF1Q9P1Y6 1649 aaKnown RBP12.76□□□□□ -0.37
SPTAN1-207ENST00000476825 KIF7Q2M1P5 1343 aa12.75□□□□□ -0.37
SPTAN1-207ENST00000476825 MED1Q15648 1581 aaPredicted RBP12.74□□□□□ -0.37
SPTAN1-207ENST00000476825 CCDC7Q96M83 1385 aa12.74□□□□□ -0.37
SPTAN1-207ENST00000476825 SOCS7O14512 581 aa12.74□□□□□ -0.37
SPTAN1-207ENST00000476825 CCDC61Q9Y6R9 512 aa12.74□□□□□ -0.37
SPTAN1-207ENST00000476825 USP6P35125 1406 aa12.73□□□□□ -0.37
SPTAN1-207ENST00000476825 SSH2Q76I76 1423 aa12.73□□□□□ -0.37
SPTAN1-207ENST00000476825 PLEKHG3A1L390 1219 aa12.73□□□□□ -0.37
SPTAN1-207ENST00000476825 PHF8Q9UPP1 1060 aa12.73□□□□□ -0.37
SPTAN1-207ENST00000476825 A0A1W2PP64 1363 aa12.72□□□□□ -0.37
SPTAN1-207ENST00000476825 WASHC2AQ641Q2 1341 aa12.72□□□□□ -0.37
SPTAN1-207ENST00000476825 ESCO1Q5FWF5 840 aa12.72□□□□□ -0.37
SPTAN1-207ENST00000476825 SOS2Q07890 1332 aaPredicted RBP12.71□□□□□ -0.37
SPTAN1-207ENST00000476825 PIP4K2BP78356 416 aa12.71□□□□□ -0.37
SPTAN1-207ENST00000476825 CDCA8Q53HL2 280 aa12.71□□□□□ -0.37
SPTAN1-207ENST00000476825 ANKRD36BQ8N2N9 1353 aa12.7□□□□□ -0.38
SPTAN1-207ENST00000476825 ACEP12821 1306 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms