RNA–Protein interactions for RNA: ENST00000476559.2

RPGR-207, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 2

Gene RPGR, Length 1,047 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-207ENST00000476559 FDX1P10109 184 aa13.58□□□□□ -0.24
RPGR-207ENST00000476559 MSS51Q4VC12 460 aa13.58□□□□□ -0.24
RPGR-207ENST00000476559 FCF1Q9Y324 198 aaKnown RBP13.58□□□□□ -0.24
RPGR-207ENST00000476559 LIAT1Q6ZQX7 453 aa13.57□□□□□ -0.24
RPGR-207ENST00000476559 TBC1D2Q9BYX2 928 aa13.57□□□□□ -0.24
RPGR-207ENST00000476559 PCDHGC3Q9UN70 934 aa13.57□□□□□ -0.24
RPGR-207ENST00000476559 C6orf229H3BNL8 230 aa13.53□□□□□ -0.24
RPGR-207ENST00000476559 SPRYD7Q5W111 196 aa13.52□□□□□ -0.25
RPGR-207ENST00000476559 GFRA3O60609 400 aa13.51□□□□□ -0.25
RPGR-207ENST00000476559 MMP16P51512 607 aa13.5□□□□□ -0.25
RPGR-207ENST00000476559 GPBP1L1Q9HC44 474 aaPredicted RBP13.5□□□□□ -0.25
RPGR-207ENST00000476559 DIXDC1Q155Q3 683 aa13.49□□□□□ -0.25
RPGR-207ENST00000476559 RETREG3Q86VR2 466 aa13.49□□□□□ -0.25
RPGR-207ENST00000476559 DXOO77932 396 aaKnown RBP13.48□□□□□ -0.25
RPGR-207ENST00000476559 RSBN1LQ6PCB5 846 aaPredicted RBP13.48□□□□□ -0.25
RPGR-207ENST00000476559 ZNF697Q5TEC3 545 aa13.47□□□□□ -0.25
RPGR-207ENST00000476559 ZNF598Q86UK7 904 aaKnown RBP13.47□□□□□ -0.25
RPGR-207ENST00000476559 PDZRN3Q9UPQ7 1066 aa13.47□□□□□ -0.25
RPGR-207ENST00000476559 PCDHB15Q9Y5E8 787 aa13.47□□□□□ -0.25
RPGR-207ENST00000476559 CCDC24Q8N4L8 307 aa13.46□□□□□ -0.25
RPGR-207ENST00000476559 CSPP1Q1MSJ5 1256 aa13.45□□□□□ -0.26
RPGR-207ENST00000476559 RIC3Q7Z5B4 369 aa13.45□□□□□ -0.26
RPGR-207ENST00000476559 KDM4CQ9H3R0 1056 aa13.45□□□□□ -0.26
RPGR-207ENST00000476559 SPTLC1O15269 473 aa13.44□□□□□ -0.26
RPGR-207ENST00000476559 JUNDP17535 347 aa13.44□□□□□ -0.26
RPGR-207ENST00000476559 ZBTB24O43167 697 aaPredicted RBP13.43□□□□□ -0.26
RPGR-207ENST00000476559 RPIAP49247 311 aa13.43□□□□□ -0.26
RPGR-207ENST00000476559 MTMR2Q13614 643 aa13.43□□□□□ -0.26
RPGR-207ENST00000476559 MYSM1Q5VVJ2 828 aa13.43□□□□□ -0.26
RPGR-207ENST00000476559 TRIM67Q6ZTA4 783 aa13.43□□□□□ -0.26
RPGR-207ENST00000476559 LAPTM4AQ15012 233 aa13.42□□□□□ -0.26
RPGR-207ENST00000476559 Q6ZNB5 142 aa13.42□□□□□ -0.26
RPGR-207ENST00000476559 GJA5P36382 358 aa13.41□□□□□ -0.26
RPGR-207ENST00000476559 TPRNQ4KMQ1 711 aa13.41□□□□□ -0.26
RPGR-207ENST00000476559 PRR7Q8TB68 274 aa13.41□□□□□ -0.26
RPGR-207ENST00000476559 LIMD1Q9UGP4 676 aa13.41□□□□□ -0.26
RPGR-207ENST00000476559 NRG2O14511 850 aaPredicted RBP13.4□□□□□ -0.26
RPGR-207ENST00000476559 CD2BP2O95400 341 aaKnown RBP13.4□□□□□ -0.26
RPGR-207ENST00000476559 TNFRSF10AO00220 468 aa13.39□□□□□ -0.27
RPGR-207ENST00000476559 FOXC1Q12948 553 aa13.39□□□□□ -0.27
RPGR-207ENST00000476559 CABLES1Q8TDN4 633 aa13.39□□□□□ -0.27
RPGR-207ENST00000476559 HRCP23327 699 aa13.38□□□□□ -0.27
RPGR-207ENST00000476559 FAM117AQ9C073 453 aa13.38□□□□□ -0.27
RPGR-207ENST00000476559 POLR3EQ9NVU0 708 aa13.38□□□□□ -0.27
RPGR-207ENST00000476559 SPDYE5A6NIY4 337 aa13.37□□□□□ -0.27
RPGR-207ENST00000476559 NUDT12Q9BQG2 462 aa13.37□□□□□ -0.27
RPGR-207ENST00000476559 ZBTB3Q9H5J0 574 aa13.37□□□□□ -0.27
RPGR-207ENST00000476559 GDF9O60383 454 aa13.35□□□□□ -0.27
RPGR-207ENST00000476559 TRIM32Q13049 653 aa13.35□□□□□ -0.27
RPGR-207ENST00000476559 QPCTQ16769 361 aa13.35□□□□□ -0.27
RPGR-207ENST00000476559 RSPH6AQ9H0K4 717 aa13.35□□□□□ -0.27
RPGR-207ENST00000476559 CFAP99D6REC4 459 aa13.34□□□□□ -0.27
RPGR-207ENST00000476559 PKD2L1Q9P0L9 805 aa13.34□□□□□ -0.27
RPGR-207ENST00000476559 NUTM2BA6NNL0 878 aaPredicted RBP13.33□□□□□ -0.28
RPGR-207ENST00000476559 NUTM2EB1AL46 878 aaPredicted RBP13.33□□□□□ -0.28
RPGR-207ENST00000476559 CLK2P49760 499 aaKnown RBP13.33□□□□□ -0.28
RPGR-207ENST00000476559 NUTM2DQ5VT03 806 aaPredicted RBP13.33□□□□□ -0.28
RPGR-207ENST00000476559 PRPF38BQ5VTL8 546 aaKnown RBP13.33□□□□□ -0.28
RPGR-207ENST00000476559 NUTM2AQ8IVF1 878 aaPredicted RBP13.33□□□□□ -0.28
RPGR-207ENST00000476559 PRR20EP86478 221 aa13.32□□□□□ -0.28
RPGR-207ENST00000476559 PRR20CP86479 221 aa13.32□□□□□ -0.28
RPGR-207ENST00000476559 PRR20DP86480 221 aa13.32□□□□□ -0.28
RPGR-207ENST00000476559 PRR20BP86481 221 aa13.32□□□□□ -0.28
RPGR-207ENST00000476559 PRR20AP86496 221 aa13.32□□□□□ -0.28
RPGR-207ENST00000476559 PTCRAQ6ISU1 281 aaPredicted RBP13.32□□□□□ -0.28
RPGR-207ENST00000476559 CCNYL3P0C7X3 344 aa13.31□□□□□ -0.28
RPGR-207ENST00000476559 NEUROD2Q15784 382 aa13.31□□□□□ -0.28
RPGR-207ENST00000476559 DDRGK1Q96HY6 314 aa13.31□□□□□ -0.28
RPGR-207ENST00000476559 PLEKHG3A1L390 1219 aa13.3□□□□□ -0.28
RPGR-207ENST00000476559 PTPRNQ16849 979 aa13.3□□□□□ -0.28
RPGR-207ENST00000476559 TSC1Q92574 1164 aa13.3□□□□□ -0.28
RPGR-207ENST00000476559 LILRB3O75022 631 aa13.29□□□□□ -0.28
RPGR-207ENST00000476559 DESI1Q6ICB0 168 aa13.29□□□□□ -0.28
RPGR-207ENST00000476559 ATP1B4Q9UN42 357 aaPredicted RBP13.29□□□□□ -0.28
RPGR-207ENST00000476559 TUSC1Q2TAM9 212 aa13.28□□□□□ -0.28
RPGR-207ENST00000476559 LCE2BO14633 110 aa13.27□□□□□ -0.29
RPGR-207ENST00000476559 RTL5Q5HYW3 569 aaPredicted RBP13.27□□□□□ -0.29
RPGR-207ENST00000476559 EVA1BQ9NVM1 165 aa13.27□□□□□ -0.29
RPGR-207ENST00000476559 LYPD8Q6UX82 237 aa13.26□□□□□ -0.29
RPGR-207ENST00000476559 SKOR1P84550 965 aa13.25□□□□□ -0.29
RPGR-207ENST00000476559 SKIV2LQ15477 1246 aaKnown RBP13.25□□□□□ -0.29
RPGR-207ENST00000476559 TRAF7Q6Q0C0 670 aa13.25□□□□□ -0.29
RPGR-207ENST00000476559 PROCA1Q8NCQ7 364 aaPredicted RBP13.25□□□□□ -0.29
RPGR-207ENST00000476559 FAM187AA6NFU0 413 aa13.24□□□□□ -0.29
RPGR-207ENST00000476559 CTHP32929 405 aa13.24□□□□□ -0.29
RPGR-207ENST00000476559 KCNH2Q12809 1159 aa13.24□□□□□ -0.29
RPGR-207ENST00000476559 PKDCCQ504Y2 493 aa13.24□□□□□ -0.29
RPGR-207ENST00000476559 SH3D19Q5HYK7 790 aa13.24□□□□□ -0.29
RPGR-207ENST00000476559 WNT7AO00755 349 aa13.23□□□□□ -0.29
RPGR-207ENST00000476559 PER1O15534 1290 aaPredicted RBP13.23□□□□□ -0.29
RPGR-207ENST00000476559 CYP4X1Q8N118 509 aa13.23□□□□□ -0.29
RPGR-207ENST00000476559 UNC93B1Q9H1C4 597 aa13.23□□□□□ -0.29
RPGR-207ENST00000476559 BRPF1P55201 1214 aaPredicted RBP13.22□□□□□ -0.29
RPGR-207ENST00000476559 IL27Q8NEV9 243 aa13.22□□□□□ -0.29
RPGR-207ENST00000476559 MRGPRX2Q96LB1 330 aa13.22□□□□□ -0.29
RPGR-207ENST00000476559 RC3H1Q5TC82 1133 aaKnown RBP13.21□□□□□ -0.29
RPGR-207ENST00000476559 WNT7BP56706 349 aa13.2□□□□□ -0.3
RPGR-207ENST00000476559 LINC01559Q495D7 138 aa13.2□□□□□ -0.3
RPGR-207ENST00000476559 TOR4AQ9NXH8 423 aa13.2□□□□□ -0.3
RPGR-207ENST00000476559 MAP10Q9P2G4 905 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms