RNA–Protein interactions for RNA: ENST00000476517.1

CDKAL1-203, Transcript of CDK5 regulatory subunit associated protein 1 like 1, humanhuman

TSL 2

Gene CDKAL1, Length 840 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1-203ENST00000476517 DIP2AQ14689 1571 aa17.05■□□□□ 0.32
CDKAL1-203ENST00000476517 ARHGAP23Q9P227 1491 aa17.05■□□□□ 0.32
CDKAL1-203ENST00000476517 YTHDC2Q9H6S0 1430 aaKnown RBP17.04■□□□□ 0.32
CDKAL1-203ENST00000476517 TOM1O60784 492 aa17.03■□□□□ 0.32
CDKAL1-203ENST00000476517 TRAK1Q9UPV9 953 aa17.02■□□□□ 0.32
CDKAL1-203ENST00000476517 KTN1Q86UP2 1357 aaKnown RBP17.02■□□□□ 0.31
CDKAL1-203ENST00000476517 CPS1P31327 1500 aa17.01■□□□□ 0.31
CDKAL1-203ENST00000476517 PIP4K2BP78356 416 aa17.01■□□□□ 0.31
CDKAL1-203ENST00000476517 TMEM132EQ6IEE7 984 aa17.01■□□□□ 0.31
CDKAL1-203ENST00000476517 PLEKHG1Q9ULL1 1385 aa17.01■□□□□ 0.31
CDKAL1-203ENST00000476517 CENPBP07199 599 aaPredicted RBP16.99■□□□□ 0.31
CDKAL1-203ENST00000476517 EID1Q9Y6B2 187 aa16.99■□□□□ 0.31
CDKAL1-203ENST00000476517 TULP4Q9NRJ4 1543 aa16.99■□□□□ 0.31
CDKAL1-203ENST00000476517 LRPPRCP42704 1394 aaKnown RBP16.99■□□□□ 0.31
CDKAL1-203ENST00000476517 PRKRIP1Q9H875 184 aaPredicted RBP16.98■□□□□ 0.31
CDKAL1-203ENST00000476517 THEMISQ8N1K5 641 aaPredicted RBP16.97■□□□□ 0.31
CDKAL1-203ENST00000476517 RGS17Q9UGC6 210 aaPredicted RBP16.96■□□□□ 0.31
CDKAL1-203ENST00000476517 TECPR2O15040 1411 aa16.96■□□□□ 0.3
CDKAL1-203ENST00000476517 EVC2Q86UK5 1308 aa16.96■□□□□ 0.3
CDKAL1-203ENST00000476517 YTHDC1Q96MU7 727 aaKnown RBP16.95■□□□□ 0.3
CDKAL1-203ENST00000476517 USP32Q8NFA0 1604 aa16.95■□□□□ 0.3
CDKAL1-203ENST00000476517 ABCC11Q96J66 1382 aa16.94■□□□□ 0.3
CDKAL1-203ENST00000476517 BCANQ96GW7 911 aa16.94■□□□□ 0.3
CDKAL1-203ENST00000476517 STK26Q9P289 416 aa16.94■□□□□ 0.3
CDKAL1-203ENST00000476517 ADAMTS13Q76LX8 1427 aa16.94■□□□□ 0.3
CDKAL1-203ENST00000476517 TXNDC2Q86VQ3 553 aa16.93■□□□□ 0.3
CDKAL1-203ENST00000476517 PUS7Q96PZ0 661 aaKnown RBP16.93■□□□□ 0.3
CDKAL1-203ENST00000476517 POGKQ9P215 609 aa16.92■□□□□ 0.3
CDKAL1-203ENST00000476517 FAM135BQ49AJ0 1406 aa16.92■□□□□ 0.3
CDKAL1-203ENST00000476517 MED14O60244 1454 aa16.92■□□□□ 0.3
CDKAL1-203ENST00000476517 NINLQ9Y2I6 1382 aa16.91■□□□□ 0.3
CDKAL1-203ENST00000476517 XRN1Q8IZH2 1706 aaKnown RBP16.91■□□□□ 0.3
CDKAL1-203ENST00000476517 ADGRB2O60241 1585 aa16.91■□□□□ 0.3
CDKAL1-203ENST00000476517 RALBP1Q15311 655 aa16.91■□□□□ 0.3
CDKAL1-203ENST00000476517 PANK3Q9H999 370 aa16.91■□□□□ 0.3
CDKAL1-203ENST00000476517 METP08581 1390 aa16.89■□□□□ 0.3
CDKAL1-203ENST00000476517 PRAM1Q96QH2 718 aa16.89■□□□□ 0.29
CDKAL1-203ENST00000476517 ITSN1Q15811 1721 aa16.89■□□□□ 0.29
CDKAL1-203ENST00000476517 ATAD2Q6PL18 1390 aa16.89■□□□□ 0.29
CDKAL1-203ENST00000476517 ANKRD26Q9UPS8 1709 aa16.88■□□□□ 0.29
CDKAL1-203ENST00000476517 PARD3Q8TEW0 1356 aa16.88■□□□□ 0.29
CDKAL1-203ENST00000476517 CHD2O14647 1828 aaKnown RBP16.87■□□□□ 0.29
CDKAL1-203ENST00000476517 LTKP29376 864 aa16.87■□□□□ 0.29
CDKAL1-203ENST00000476517 KNSTRNQ9Y448 316 aa16.87■□□□□ 0.29
CDKAL1-203ENST00000476517 SRCAPQ6ZRS2 3230 aa16.87■□□□□ 0.29
CDKAL1-203ENST00000476517 MYBBP1AQ9BQG0 1328 aaKnown RBP16.87■□□□□ 0.29
CDKAL1-203ENST00000476517 KIF20BQ96Q89 1820 aa16.86■□□□□ 0.29
CDKAL1-203ENST00000476517 SIRT1Q96EB6 747 aa16.86■□□□□ 0.29
CDKAL1-203ENST00000476517 NPC1L1Q9UHC9 1359 aa16.86■□□□□ 0.29
CDKAL1-203ENST00000476517 PER1O15534 1290 aaPredicted RBP16.85■□□□□ 0.29
CDKAL1-203ENST00000476517 SAFB2Q14151 953 aaKnown RBP eCLIP16.85■□□□□ 0.29
CDKAL1-203ENST00000476517 MRS2Q9HD23 443 aa16.85■□□□□ 0.29
CDKAL1-203ENST00000476517 PTCH1Q13635 1447 aa16.85■□□□□ 0.29
CDKAL1-203ENST00000476517 U3KPZ7 1027 aaPredicted RBP16.84■□□□□ 0.29
CDKAL1-203ENST00000476517 MINK1Q8N4C8 1332 aaPredicted RBP16.84■□□□□ 0.29
CDKAL1-203ENST00000476517 BRD4O60885 1362 aaPredicted RBP16.84■□□□□ 0.29
CDKAL1-203ENST00000476517 PIK3R4Q99570 1358 aa16.84■□□□□ 0.29
CDKAL1-203ENST00000476517 SRPK2P78362 688 aaKnown RBP16.83■□□□□ 0.28
CDKAL1-203ENST00000476517 AKAP12Q02952 1782 aa16.83■□□□□ 0.28
CDKAL1-203ENST00000476517 TBX22Q9Y458 520 aa16.83■□□□□ 0.28
CDKAL1-203ENST00000476517 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.82■□□□□ 0.28
CDKAL1-203ENST00000476517 TOPAZ1Q8N9V7 1692 aa16.82■□□□□ 0.28
CDKAL1-203ENST00000476517 ANKRD36BQ8N2N9 1353 aa16.82■□□□□ 0.28
CDKAL1-203ENST00000476517 ANKLE2Q86XL3 938 aa16.82■□□□□ 0.28
CDKAL1-203ENST00000476517 PLEKHH1Q9ULM0 1364 aa16.81■□□□□ 0.28
CDKAL1-203ENST00000476517 CNGB1Q14028 1251 aaPredicted RBP16.81■□□□□ 0.28
CDKAL1-203ENST00000476517 TMC1Q8TDI8 760 aa16.81■□□□□ 0.28
CDKAL1-203ENST00000476517 MON2Q7Z3U7 1717 aa16.81■□□□□ 0.28
CDKAL1-203ENST00000476517 ATP7BP35670 1465 aa16.8■□□□□ 0.28
CDKAL1-203ENST00000476517 NSD3Q9BZ95 1437 aa16.79■□□□□ 0.28
CDKAL1-203ENST00000476517 CC2D1BQ5T0F9 858 aaKnown RBP16.79■□□□□ 0.28
CDKAL1-203ENST00000476517 POTEAQ6S8J7 498 aa16.79■□□□□ 0.28
CDKAL1-203ENST00000476517 NLRP13Q86W25 1043 aa16.79■□□□□ 0.28
CDKAL1-203ENST00000476517 CABP2Q9NPB3 220 aa16.79■□□□□ 0.28
CDKAL1-203ENST00000476517 PTPRUQ92729 1446 aa16.79■□□□□ 0.28
CDKAL1-203ENST00000476517 ROBO2Q9HCK4 1378 aa16.78■□□□□ 0.28
CDKAL1-203ENST00000476517 NPHP4O75161 1426 aaPredicted RBP16.78■□□□□ 0.28
CDKAL1-203ENST00000476517 NSD2O96028 1365 aa16.77■□□□□ 0.28
CDKAL1-203ENST00000476517 CDC42BPGQ6DT37 1551 aa16.77■□□□□ 0.28
CDKAL1-203ENST00000476517 SLC26A8Q96RN1 970 aa16.77■□□□□ 0.28
CDKAL1-203ENST00000476517 NWD1Q149M9 1564 aa16.77■□□□□ 0.27
CDKAL1-203ENST00000476517 SLC4A2P04920 1241 aa16.76■□□□□ 0.27
CDKAL1-203ENST00000476517 AMER1Q5JTC6 1135 aaPredicted RBP16.76■□□□□ 0.27
CDKAL1-203ENST00000476517 WAPLQ7Z5K2 1190 aa16.76■□□□□ 0.27
CDKAL1-203ENST00000476517 CDK19Q9BWU1 502 aa16.76■□□□□ 0.27
CDKAL1-203ENST00000476517 NALCNQ8IZF0 1738 aa16.76■□□□□ 0.27
CDKAL1-203ENST00000476517 FMN2Q9NZ56 1722 aa16.76■□□□□ 0.27
CDKAL1-203ENST00000476517 TERF2IPQ9NYB0 399 aa16.75■□□□□ 0.27
CDKAL1-203ENST00000476517 WASLO00401 505 aaPredicted RBP16.74■□□□□ 0.27
CDKAL1-203ENST00000476517 SLC12A5Q9H2X9 1139 aa16.74■□□□□ 0.27
CDKAL1-203ENST00000476517 A0A1W2PP64 1363 aa16.74■□□□□ 0.27
CDKAL1-203ENST00000476517 CGNL1Q0VF96 1302 aa16.73■□□□□ 0.27
CDKAL1-203ENST00000476517 CCDC184Q52MB2 194 aa16.73■□□□□ 0.27
CDKAL1-203ENST00000476517 HDGFL2Q7Z4V5 671 aaPredicted RBP16.73■□□□□ 0.27
CDKAL1-203ENST00000476517 AMOTL2Q9Y2J4 779 aa16.73■□□□□ 0.27
CDKAL1-203ENST00000476517 LRRC7Q96NW7 1537 aa16.73■□□□□ 0.27
CDKAL1-203ENST00000476517 RGPD8O14715 1765 aaPredicted RBP16.73■□□□□ 0.27
CDKAL1-203ENST00000476517 CD163L1Q9NR16 1453 aa16.72■□□□□ 0.27
CDKAL1-203ENST00000476517 PPIP5K1Q6PFW1 1433 aa16.71■□□□□ 0.27
CDKAL1-203ENST00000476517 FAM9BQ8IZU0 186 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms