RNA–Protein interactions for RNA: ENST00000476494.1

CLDN4-205, Transcript of claudin 4, humanhuman

TSL 4

Gene CLDN4, Length 580 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-205ENST00000476494 ERBINQ96RT1 1412 aa10.39□□□□□ -0.75
CLDN4-205ENST00000476494 CHD4Q14839 1912 aa10.39□□□□□ -0.75
CLDN4-205ENST00000476494 VPS72Q15906 364 aa10.38□□□□□ -0.75
CLDN4-205ENST00000476494 EZH2Q15910 746 aaKnown RBP10.38□□□□□ -0.75
CLDN4-205ENST00000476494 TNS1Q9HBL0 1735 aaKnown RBP10.38□□□□□ -0.75
CLDN4-205ENST00000476494 NRXN3Q9Y4C0 1643 aa10.37□□□□□ -0.75
CLDN4-205ENST00000476494 RGPD1P0DJD0 1748 aa10.37□□□□□ -0.75
CLDN4-205ENST00000476494 PXDNQ92626 1479 aa10.36□□□□□ -0.75
CLDN4-205ENST00000476494 KIF15Q9NS87 1388 aa10.36□□□□□ -0.75
CLDN4-205ENST00000476494 METP08581 1390 aa10.35□□□□□ -0.75
CLDN4-205ENST00000476494 KANK1Q14678 1352 aa10.34□□□□□ -0.75
CLDN4-205ENST00000476494 DCAF8L1A6NGE4 600 aa10.33□□□□□ -0.76
CLDN4-205ENST00000476494 KCNQ2O43526 872 aa10.33□□□□□ -0.76
CLDN4-205ENST00000476494 SPON1Q9HCB6 807 aa10.33□□□□□ -0.76
CLDN4-205ENST00000476494 RRP7BPQ9NSQ0 103 aa10.33□□□□□ -0.76
CLDN4-205ENST00000476494 RPRD2Q5VT52 1461 aaKnown RBP10.33□□□□□ -0.76
CLDN4-205ENST00000476494 FAM182BQ5T319 152 aa10.32□□□□□ -0.76
CLDN4-205ENST00000476494 PTPN23Q9H3S7 1636 aa10.32□□□□□ -0.76
CLDN4-205ENST00000476494 RREB1Q92766 1687 aa10.31□□□□□ -0.76
CLDN4-205ENST00000476494 NWD2Q9ULI1 1742 aa10.31□□□□□ -0.76
CLDN4-205ENST00000476494 NUP188Q5SRE5 1749 aa10.3□□□□□ -0.76
CLDN4-205ENST00000476494 USP32Q8NFA0 1604 aa10.29□□□□□ -0.76
CLDN4-205ENST00000476494 PPP1R1BQ9UD71 204 aaPredicted RBP10.29□□□□□ -0.76
CLDN4-205ENST00000476494 ABCC5O15440 1437 aa10.29□□□□□ -0.76
CLDN4-205ENST00000476494 NPHP3Q7Z494 1330 aa10.29□□□□□ -0.76
CLDN4-205ENST00000476494 ADGRL2O95490 1459 aa10.29□□□□□ -0.76
CLDN4-205ENST00000476494 PARD3Q8TEW0 1356 aa10.28□□□□□ -0.76
CLDN4-205ENST00000476494 MYOM3Q5VTT5 1437 aa10.28□□□□□ -0.76
CLDN4-205ENST00000476494 PLCH1Q4KWH8 1693 aa10.28□□□□□ -0.76
CLDN4-205ENST00000476494 FOXO3O43524 673 aa10.27□□□□□ -0.77
CLDN4-205ENST00000476494 XPCQ01831 940 aaPredicted RBP10.27□□□□□ -0.77
CLDN4-205ENST00000476494 SLC34A2O95436 690 aa10.26□□□□□ -0.77
CLDN4-205ENST00000476494 FAM98CQ17RN3 349 aaKnown RBP10.26□□□□□ -0.77
CLDN4-205ENST00000476494 SPATA31A3Q5VYP0 1347 aa10.26□□□□□ -0.77
CLDN4-205ENST00000476494 CROCC2H7BZ55 1655 aa10.25□□□□□ -0.77
CLDN4-205ENST00000476494 GIGYF1O75420 1035 aaPredicted RBP10.25□□□□□ -0.77
CLDN4-205ENST00000476494 ROBO2Q9HCK4 1378 aa10.25□□□□□ -0.77
CLDN4-205ENST00000476494 THSD7AQ9UPZ6 1657 aa10.25□□□□□ -0.77
CLDN4-205ENST00000476494 NRAPQ86VF7 1730 aa10.24□□□□□ -0.77
CLDN4-205ENST00000476494 FAM83GA6ND36 823 aa10.24□□□□□ -0.77
CLDN4-205ENST00000476494 TRIM37O94972 964 aa10.24□□□□□ -0.77
CLDN4-205ENST00000476494 CHGAP10645 457 aaKnown RBP10.24□□□□□ -0.77
CLDN4-205ENST00000476494 PTGER2P43116 358 aa10.24□□□□□ -0.77
CLDN4-205ENST00000476494 CASZ1Q86V15 1759 aa10.24□□□□□ -0.77
CLDN4-205ENST00000476494 PRAG1Q86YV5 1406 aa10.24□□□□□ -0.77
CLDN4-205ENST00000476494 NRKQ7Z2Y5 1582 aa10.23□□□□□ -0.77
CLDN4-205ENST00000476494 APBA3O96018 575 aa10.23□□□□□ -0.77
CLDN4-205ENST00000476494 ESCO1Q5FWF5 840 aa10.23□□□□□ -0.77
CLDN4-205ENST00000476494 SYT17Q9BSW7 474 aa10.23□□□□□ -0.77
CLDN4-205ENST00000476494 ADGRB2O60241 1585 aa10.22□□□□□ -0.77
CLDN4-205ENST00000476494 NBPF8Q3BBV2 869 aa10.22□□□□□ -0.77
CLDN4-205ENST00000476494 NBPF14Q5TI25 921 aa10.22□□□□□ -0.77
CLDN4-205ENST00000476494 PDGFDQ9GZP0 370 aaPredicted RBP10.22□□□□□ -0.77
CLDN4-205ENST00000476494 CCDC9Q9Y3X0 531 aaKnown RBP10.22□□□□□ -0.77
CLDN4-205ENST00000476494 MYOM1P52179 1685 aa10.22□□□□□ -0.77
CLDN4-205ENST00000476494 CABLES1Q8TDN4 633 aa10.21□□□□□ -0.77
CLDN4-205ENST00000476494 IQGAP3Q86VI3 1631 aa10.21□□□□□ -0.78
CLDN4-205ENST00000476494 SHANK3Q9BYB0 1731 aa10.21□□□□□ -0.78
CLDN4-205ENST00000476494 E9PCH4 1651 aa10.2□□□□□ -0.78
CLDN4-205ENST00000476494 FAM196AQ6ZSG2 479 aa10.2□□□□□ -0.78
CLDN4-205ENST00000476494 ABCA3Q99758 1704 aa10.19□□□□□ -0.78
CLDN4-205ENST00000476494 SPATA31A5Q5VU36 1347 aa10.19□□□□□ -0.78
CLDN4-205ENST00000476494 SPATA31A7Q8IWB4 1347 aa10.19□□□□□ -0.78
CLDN4-205ENST00000476494 A0A0G2JS52 829 aa10.19□□□□□ -0.78
CLDN4-205ENST00000476494 MYT1Q01538 1121 aa10.19□□□□□ -0.78
CLDN4-205ENST00000476494 SGIP1Q9BQI5 828 aa10.19□□□□□ -0.78
CLDN4-205ENST00000476494 FHDC1Q9C0D6 1143 aaPredicted RBP10.19□□□□□ -0.78
CLDN4-205ENST00000476494 GOLGB1Q14789 3259 aaKnown RBP10.19□□□□□ -0.78
CLDN4-205ENST00000476494 DAPK1P53355 1430 aa10.18□□□□□ -0.78
CLDN4-205ENST00000476494 LRPPRCP42704 1394 aaKnown RBP10.18□□□□□ -0.78
CLDN4-205ENST00000476494 CDC42BPGQ6DT37 1551 aa10.18□□□□□ -0.78
CLDN4-205ENST00000476494 HSPA6P17066 643 aa10.17□□□□□ -0.78
CLDN4-205ENST00000476494 ANO8Q9HCE9 1232 aaPredicted RBP10.17□□□□□ -0.78
CLDN4-205ENST00000476494 ANKRD30AQ9BXX3 1397 aa10.16□□□□□ -0.78
CLDN4-205ENST00000476494 KRT28Q7Z3Y7 464 aa10.16□□□□□ -0.78
CLDN4-205ENST00000476494 NEXMIFQ5QGS0 1516 aa10.16□□□□□ -0.78
CLDN4-205ENST00000476494 HFM1A2PYH4 1435 aa10.16□□□□□ -0.78
CLDN4-205ENST00000476494 KANK4Q5T7N3 995 aaPredicted RBP10.15□□□□□ -0.78
CLDN4-205ENST00000476494 BTG4Q9NY30 223 aa10.15□□□□□ -0.78
CLDN4-205ENST00000476494 CHIC2Q9UKJ5 165 aa10.15□□□□□ -0.78
CLDN4-205ENST00000476494 CCDC144AA2RUR9 1427 aa10.14□□□□□ -0.79
CLDN4-205ENST00000476494 TNS3Q68CZ2 1445 aa10.14□□□□□ -0.79
CLDN4-205ENST00000476494 ZBTB7AO95365 584 aa10.13□□□□□ -0.79
CLDN4-205ENST00000476494 PRELPP51888 382 aa10.13□□□□□ -0.79
CLDN4-205ENST00000476494 COL13A1Q5TAT6 717 aaPredicted RBP10.13□□□□□ -0.79
CLDN4-205ENST00000476494 DNAJC5GQ8N7S2 189 aa10.13□□□□□ -0.79
CLDN4-205ENST00000476494 MAP3K5Q99683 1374 aa10.13□□□□□ -0.79
CLDN4-205ENST00000476494 PROM2Q8N271 834 aa10.12□□□□□ -0.79
CLDN4-205ENST00000476494 ATF5Q9Y2D1 282 aaPredicted RBP10.12□□□□□ -0.79
CLDN4-205ENST00000476494 DLC1Q96QB1 1528 aa10.12□□□□□ -0.79
CLDN4-205ENST00000476494 COL14A1Q05707 1796 aaKnown RBP10.11□□□□□ -0.79
CLDN4-205ENST00000476494 SPATA31A1Q5TZJ5 1347 aa10.11□□□□□ -0.79
CLDN4-205ENST00000476494 ANKRD50Q9ULJ7 1429 aa10.11□□□□□ -0.79
CLDN4-205ENST00000476494 NUTM2FA1L443 756 aa10.11□□□□□ -0.79
CLDN4-205ENST00000476494 PCDH10Q9P2E7 1040 aa10.11□□□□□ -0.79
CLDN4-205ENST00000476494 SBNO1A3KN83 1393 aa10.11□□□□□ -0.79
CLDN4-205ENST00000476494 RGPD3A6NKT7 1758 aaPredicted RBP10.11□□□□□ -0.79
CLDN4-205ENST00000476494 RGPD4Q7Z3J3 1758 aa10.11□□□□□ -0.79
CLDN4-205ENST00000476494 NAIPQ13075 1403 aa10.1□□□□□ -0.79
CLDN4-205ENST00000476494 RRBP1Q9P2E9 1410 aaKnown RBP10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms