RNA–Protein interactions for RNA: ENST00000476173.5

TMEM254-211, Transcript of transmembrane protein 254, humanhuman

TSL 4

Gene TMEM254, Length 785 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-211ENST00000476173 DLC1Q96QB1 1528 aa13.85□□□□□ -0.19
TMEM254-211ENST00000476173 CPS1P31327 1500 aa13.84□□□□□ -0.19
TMEM254-211ENST00000476173 USP47Q96K76 1375 aa13.83□□□□□ -0.19
TMEM254-211ENST00000476173 PTCH1Q13635 1447 aa13.83□□□□□ -0.2
TMEM254-211ENST00000476173 NKTRP30414 1462 aaKnown RBP13.83□□□□□ -0.2
TMEM254-211ENST00000476173 WAPLQ7Z5K2 1190 aa13.83□□□□□ -0.2
TMEM254-211ENST00000476173 PRAM1Q96QH2 718 aa13.83□□□□□ -0.2
TMEM254-211ENST00000476173 FAM135BQ49AJ0 1406 aa13.82□□□□□ -0.2
TMEM254-211ENST00000476173 ARHGEF28Q8N1W1 1705 aaKnown RBP13.82□□□□□ -0.2
TMEM254-211ENST00000476173 PLEKHH1Q9ULM0 1364 aa13.82□□□□□ -0.2
TMEM254-211ENST00000476173 PROSER2Q86WR7 435 aaPredicted RBP13.81□□□□□ -0.2
TMEM254-211ENST00000476173 POGKQ9P215 609 aa13.81□□□□□ -0.2
TMEM254-211ENST00000476173 LTBP4Q8N2S1 1624 aa13.81□□□□□ -0.2
TMEM254-211ENST00000476173 EIF3AQ14152 1382 aaKnown RBP13.81□□□□□ -0.2
TMEM254-211ENST00000476173 ST20-MTHFSA0A0A6YYL1 179 aa13.8□□□□□ -0.2
TMEM254-211ENST00000476173 EIF4G2P78344 907 aaKnown RBP eCLIP13.8□□□□□ -0.2
TMEM254-211ENST00000476173 RBM33Q96EV2 1170 aaKnown RBP13.8□□□□□ -0.2
TMEM254-211ENST00000476173 HSPA5P11021 654 aaKnown RBP13.79□□□□□ -0.2
TMEM254-211ENST00000476173 SAFB2Q14151 953 aaKnown RBP eCLIP13.79□□□□□ -0.2
TMEM254-211ENST00000476173 CENPJQ9HC77 1338 aaPredicted RBP13.79□□□□□ -0.2
TMEM254-211ENST00000476173 LRRC7Q96NW7 1537 aa13.79□□□□□ -0.2
TMEM254-211ENST00000476173 TESK2Q96S53 571 aa13.78□□□□□ -0.2
TMEM254-211ENST00000476173 TMEM94Q12767 1356 aa13.78□□□□□ -0.2
TMEM254-211ENST00000476173 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.76□□□□□ -0.21
TMEM254-211ENST00000476173 QRICH2Q9H0J4 1663 aa13.76□□□□□ -0.21
TMEM254-211ENST00000476173 NCOA3Q9Y6Q9 1424 aa13.76□□□□□ -0.21
TMEM254-211ENST00000476173 HIRIP3Q9BW71 556 aaPredicted RBP13.76□□□□□ -0.21
TMEM254-211ENST00000476173 SBNO2Q9Y2G9 1366 aa13.75□□□□□ -0.21
TMEM254-211ENST00000476173 MINK1Q8N4C8 1332 aaPredicted RBP13.75□□□□□ -0.21
TMEM254-211ENST00000476173 XIRP1Q702N8 1843 aaKnown RBP13.75□□□□□ -0.21
TMEM254-211ENST00000476173 ADGRL3Q9HAR2 1447 aa13.73□□□□□ -0.21
TMEM254-211ENST00000476173 C14orf37Q86TY3 774 aa13.73□□□□□ -0.21
TMEM254-211ENST00000476173 C19orf44Q9H6X5 657 aa13.73□□□□□ -0.21
TMEM254-211ENST00000476173 NALCNQ8IZF0 1738 aa13.73□□□□□ -0.21
TMEM254-211ENST00000476173 ADGRB2O60241 1585 aa13.71□□□□□ -0.21
TMEM254-211ENST00000476173 WASLO00401 505 aaPredicted RBP13.71□□□□□ -0.21
TMEM254-211ENST00000476173 SLC24A1O60721 1099 aa13.71□□□□□ -0.21
TMEM254-211ENST00000476173 TULP4Q9NRJ4 1543 aa13.7□□□□□ -0.22
TMEM254-211ENST00000476173 CDK19Q9BWU1 502 aa13.7□□□□□ -0.22
TMEM254-211ENST00000476173 SPINK5Q9NQ38 1064 aaPredicted RBP13.7□□□□□ -0.22
TMEM254-211ENST00000476173 MSH6P52701 1360 aa13.7□□□□□ -0.22
TMEM254-211ENST00000476173 EVC2Q86UK5 1308 aa13.69□□□□□ -0.22
TMEM254-211ENST00000476173 TMF1P82094 1093 aa13.69□□□□□ -0.22
TMEM254-211ENST00000476173 C1QBPQ07021 282 aaKnown RBP13.69□□□□□ -0.22
TMEM254-211ENST00000476173 CDC42BPGQ6DT37 1551 aa13.69□□□□□ -0.22
TMEM254-211ENST00000476173 DISP3Q9P2K9 1392 aa13.69□□□□□ -0.22
TMEM254-211ENST00000476173 DCCP43146 1447 aa13.68□□□□□ -0.22
TMEM254-211ENST00000476173 C11orf95C9JLR9 678 aaPredicted RBP13.68□□□□□ -0.22
TMEM254-211ENST00000476173 ATF3P18847 181 aa13.68□□□□□ -0.22
TMEM254-211ENST00000476173 CERKQ8TCT0 537 aa13.68□□□□□ -0.22
TMEM254-211ENST00000476173 CADPS2Q86UW7 1296 aa13.67□□□□□ -0.22
TMEM254-211ENST00000476173 CABP2Q9NPB3 220 aa13.67□□□□□ -0.22
TMEM254-211ENST00000476173 SRPK2P78362 688 aaKnown RBP13.66□□□□□ -0.22
TMEM254-211ENST00000476173 PUS7Q96PZ0 661 aaKnown RBP13.66□□□□□ -0.22
TMEM254-211ENST00000476173 IQSEC2Q5JU85 1478 aa13.66□□□□□ -0.22
TMEM254-211ENST00000476173 PRR36Q9H6K5 1346 aa13.65□□□□□ -0.22
TMEM254-211ENST00000476173 FMN2Q9NZ56 1722 aa13.65□□□□□ -0.22
TMEM254-211ENST00000476173 CDCA8Q53HL2 280 aa13.65□□□□□ -0.22
TMEM254-211ENST00000476173 NUTM2FA1L443 756 aa13.64□□□□□ -0.23
TMEM254-211ENST00000476173 NUDT16Q96DE0 195 aaKnown RBP13.64□□□□□ -0.23
TMEM254-211ENST00000476173 MST1RQ04912 1400 aa13.64□□□□□ -0.23
TMEM254-211ENST00000476173 ANKARQ7Z5J8 1434 aa13.64□□□□□ -0.23
TMEM254-211ENST00000476173 KIF7Q2M1P5 1343 aa13.64□□□□□ -0.23
TMEM254-211ENST00000476173 SLAIN2Q9P270 581 aa13.63□□□□□ -0.23
TMEM254-211ENST00000476173 USP32Q8NFA0 1604 aa13.63□□□□□ -0.23
TMEM254-211ENST00000476173 ATP7BP35670 1465 aa13.62□□□□□ -0.23
TMEM254-211ENST00000476173 C1orf167Q5SNV9 1468 aa13.62□□□□□ -0.23
TMEM254-211ENST00000476173 ATAD2Q6PL18 1390 aa13.62□□□□□ -0.23
TMEM254-211ENST00000476173 CCDC61Q9Y6R9 512 aa13.62□□□□□ -0.23
TMEM254-211ENST00000476173 RGPD8O14715 1765 aaPredicted RBP13.62□□□□□ -0.23
TMEM254-211ENST00000476173 WASHC2AQ641Q2 1341 aa13.62□□□□□ -0.23
TMEM254-211ENST00000476173 CCDC7Q96M83 1385 aa13.61□□□□□ -0.23
TMEM254-211ENST00000476173 ZNF316A6NFI3 1004 aaPredicted RBP13.61□□□□□ -0.23
TMEM254-211ENST00000476173 POLR3GLQ9BT43 218 aa13.6□□□□□ -0.23
TMEM254-211ENST00000476173 PLEKHG3A1L390 1219 aa13.59□□□□□ -0.23
TMEM254-211ENST00000476173 TOM1O60784 492 aa13.59□□□□□ -0.23
TMEM254-211ENST00000476173 CAPN15O75808 1086 aa13.59□□□□□ -0.23
TMEM254-211ENST00000476173 ESCO1Q5FWF5 840 aa13.59□□□□□ -0.23
TMEM254-211ENST00000476173 ORAI2Q96SN7 254 aa13.59□□□□□ -0.23
TMEM254-211ENST00000476173 CABP1Q9NZU7 370 aa13.59□□□□□ -0.23
TMEM254-211ENST00000476173 PPIP5K1Q6PFW1 1433 aa13.58□□□□□ -0.24
TMEM254-211ENST00000476173 UBAP1LF5GYI3 381 aa13.58□□□□□ -0.24
TMEM254-211ENST00000476173 SLC12A5Q9H2X9 1139 aa13.58□□□□□ -0.24
TMEM254-211ENST00000476173 ZNF219Q9P2Y4 722 aaPredicted RBP13.58□□□□□ -0.24
TMEM254-211ENST00000476173 PHF8Q9UPP1 1060 aa13.58□□□□□ -0.24
TMEM254-211ENST00000476173 TOPAZ1Q8N9V7 1692 aa13.58□□□□□ -0.24
TMEM254-211ENST00000476173 ITSN1Q15811 1721 aa13.57□□□□□ -0.24
TMEM254-211ENST00000476173 BRINP3Q76B58 766 aa13.57□□□□□ -0.24
TMEM254-211ENST00000476173 TMC1Q8TDI8 760 aa13.57□□□□□ -0.24
TMEM254-211ENST00000476173 NINLQ9Y2I6 1382 aa13.57□□□□□ -0.24
TMEM254-211ENST00000476173 PMFBP1Q8TBY8 1022 aa13.56□□□□□ -0.24
TMEM254-211ENST00000476173 MYOM1P52179 1685 aa13.56□□□□□ -0.24
TMEM254-211ENST00000476173 ACEP12821 1306 aa13.55□□□□□ -0.24
TMEM254-211ENST00000476173 CD163L1Q9NR16 1453 aa13.55□□□□□ -0.24
TMEM254-211ENST00000476173 POLR3AO14802 1390 aaPredicted RBP13.54□□□□□ -0.24
TMEM254-211ENST00000476173 FOXO3O43524 673 aa13.53□□□□□ -0.24
TMEM254-211ENST00000476173 PIP4K2BP78356 416 aa13.53□□□□□ -0.24
TMEM254-211ENST00000476173 NGDNQ8NEJ9 315 aaKnown RBP13.53□□□□□ -0.24
TMEM254-211ENST00000476173 PANK3Q9H999 370 aa13.53□□□□□ -0.24
TMEM254-211ENST00000476173 TERF2IPQ9NYB0 399 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms