RNA–Protein interactions for RNA: ENST00000476142.1

CCDC66-216, Transcript of coiled-coil domain containing 66, humanhuman

TSL 2

Gene CCDC66, Length 2,783 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-216ENST00000476142 POGKQ9P215 609 aa11.74□□□□□ -0.53
CCDC66-216ENST00000476142 FANCIQ9NVI1 1328 aa11.74□□□□□ -0.53
CCDC66-216ENST00000476142 DIP2BQ9P265 1576 aa11.73□□□□□ -0.53
CCDC66-216ENST00000476142 MINK1Q8N4C8 1332 aaPredicted RBP11.73□□□□□ -0.53
CCDC66-216ENST00000476142 ZNF521Q96K83 1311 aa11.73□□□□□ -0.53
CCDC66-216ENST00000476142 MSH5O43196 834 aa11.73□□□□□ -0.53
CCDC66-216ENST00000476142 C20orf194Q5TEA3 1177 aa11.73□□□□□ -0.53
CCDC66-216ENST00000476142 PRAM1Q96QH2 718 aa11.73□□□□□ -0.53
CCDC66-216ENST00000476142 SLFN5Q08AF3 891 aa11.72□□□□□ -0.53
CCDC66-216ENST00000476142 NEUROD2Q15784 382 aa11.72□□□□□ -0.53
CCDC66-216ENST00000476142 PREX1Q8TCU6 1659 aa11.72□□□□□ -0.53
CCDC66-216ENST00000476142 TULP4Q9NRJ4 1543 aa11.72□□□□□ -0.53
CCDC66-216ENST00000476142 MTHFSP49914 203 aa11.71□□□□□ -0.53
CCDC66-216ENST00000476142 MYT1Q01538 1121 aa11.71□□□□□ -0.53
CCDC66-216ENST00000476142 ERICH6Q7L0X2 663 aa11.71□□□□□ -0.53
CCDC66-216ENST00000476142 SPINK5Q9NQ38 1064 aaPredicted RBP11.71□□□□□ -0.53
CCDC66-216ENST00000476142 POLR3AO14802 1390 aaPredicted RBP11.71□□□□□ -0.54
CCDC66-216ENST00000476142 ARHGEF28Q8N1W1 1705 aaKnown RBP11.7□□□□□ -0.54
CCDC66-216ENST00000476142 RRP7AQ9Y3A4 280 aaKnown RBP11.7□□□□□ -0.54
CCDC66-216ENST00000476142 ZFYVE9O95405 1425 aa11.7□□□□□ -0.54
CCDC66-216ENST00000476142 ANKRD36BQ8N2N9 1353 aa11.7□□□□□ -0.54
CCDC66-216ENST00000476142 CFAP53Q96M91 514 aa11.7□□□□□ -0.54
CCDC66-216ENST00000476142 TMEM131LA2VDJ0 1609 aa11.69□□□□□ -0.54
CCDC66-216ENST00000476142 MYO5BQ9ULV0 1848 aa11.69□□□□□ -0.54
CCDC66-216ENST00000476142 DMRT2Q9Y5R5 561 aa11.69□□□□□ -0.54
CCDC66-216ENST00000476142 E9PSI1 815 aa11.68□□□□□ -0.54
CCDC66-216ENST00000476142 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.68□□□□□ -0.54
CCDC66-216ENST00000476142 ESF1Q9H501 851 aaKnown RBP11.68□□□□□ -0.54
CCDC66-216ENST00000476142 PUS7Q96PZ0 661 aaKnown RBP11.68□□□□□ -0.54
CCDC66-216ENST00000476142 YTHDC2Q9H6S0 1430 aaKnown RBP11.68□□□□□ -0.54
CCDC66-216ENST00000476142 GGNBP2Q9H3C7 697 aa11.67□□□□□ -0.54
CCDC66-216ENST00000476142 A0A1W2PP64 1363 aa11.67□□□□□ -0.54
CCDC66-216ENST00000476142 WWC1Q8IX03 1113 aa11.67□□□□□ -0.54
CCDC66-216ENST00000476142 RUNDC1Q96C34 613 aa11.67□□□□□ -0.54
CCDC66-216ENST00000476142 U2AF1L5P0DN76 240 aaPredicted RBP11.66□□□□□ -0.54
CCDC66-216ENST00000476142 U2AF1Q01081 240 aaKnown RBP eCLIP11.66□□□□□ -0.54
CCDC66-216ENST00000476142 PTPRMP28827 1452 aa11.66□□□□□ -0.54
CCDC66-216ENST00000476142 NKTRP30414 1462 aaKnown RBP11.66□□□□□ -0.54
CCDC66-216ENST00000476142 BCAR3O75815 825 aa11.66□□□□□ -0.54
CCDC66-216ENST00000476142 TRMT2AQ8IZ69 625 aaKnown RBP11.66□□□□□ -0.54
CCDC66-216ENST00000476142 TCP11L2Q8N4U5 519 aa11.66□□□□□ -0.54
CCDC66-216ENST00000476142 TERF2IPQ9NYB0 399 aa11.66□□□□□ -0.54
CCDC66-216ENST00000476142 SKAP1Q86WV1 359 aa11.65□□□□□ -0.54
CCDC66-216ENST00000476142 CDK19Q9BWU1 502 aa11.65□□□□□ -0.54
CCDC66-216ENST00000476142 PPP6R1Q9UPN7 881 aa11.65□□□□□ -0.54
CCDC66-216ENST00000476142 CLTCQ00610 1675 aaKnown RBP11.65□□□□□ -0.54
CCDC66-216ENST00000476142 WAPLQ7Z5K2 1190 aa11.65□□□□□ -0.54
CCDC66-216ENST00000476142 NSD2O96028 1365 aa11.64□□□□□ -0.55
CCDC66-216ENST00000476142 ATAD2Q6PL18 1390 aa11.64□□□□□ -0.55
CCDC66-216ENST00000476142 NGEFQ8N5V2 710 aa11.64□□□□□ -0.55
CCDC66-216ENST00000476142 ALKQ9UM73 1620 aa11.64□□□□□ -0.55
CCDC66-216ENST00000476142 TCERG1O14776 1098 aaKnown RBP11.64□□□□□ -0.55
CCDC66-216ENST00000476142 U2SURPO15042 1029 aaKnown RBP11.64□□□□□ -0.55
CCDC66-216ENST00000476142 CANXP27824 592 aaKnown RBP11.64□□□□□ -0.55
CCDC66-216ENST00000476142 RIMS2Q9UQ26 1411 aa11.63□□□□□ -0.55
CCDC66-216ENST00000476142 ANP32AP39687 249 aaKnown RBP11.63□□□□□ -0.55
CCDC66-216ENST00000476142 HDGFL2Q7Z4V5 671 aaPredicted RBP11.63□□□□□ -0.55
CCDC66-216ENST00000476142 CABP1Q9NZU7 370 aa11.63□□□□□ -0.55
CCDC66-216ENST00000476142 AGLP35573 1532 aa11.63□□□□□ -0.55
CCDC66-216ENST00000476142 NINLQ9Y2I6 1382 aa11.63□□□□□ -0.55
CCDC66-216ENST00000476142 USP32Q8NFA0 1604 aa11.63□□□□□ -0.55
CCDC66-216ENST00000476142 A2ML1A8K2U0 1454 aa11.62□□□□□ -0.55
CCDC66-216ENST00000476142 NPM2Q86SE8 214 aaKnown RBP11.62□□□□□ -0.55
CCDC66-216ENST00000476142 ABCC11Q96J66 1382 aa11.62□□□□□ -0.55
CCDC66-216ENST00000476142 SHPRHQ149N8 1683 aa11.62□□□□□ -0.55
CCDC66-216ENST00000476142 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.62□□□□□ -0.55
CCDC66-216ENST00000476142 REREQ9P2R6 1566 aa11.61□□□□□ -0.55
CCDC66-216ENST00000476142 FYB1O15117 783 aa11.61□□□□□ -0.55
CCDC66-216ENST00000476142 FRAT1Q92837 279 aaPredicted RBP11.61□□□□□ -0.55
CCDC66-216ENST00000476142 ZMYM3Q14202 1370 aa11.6□□□□□ -0.55
CCDC66-216ENST00000476142 PDE4AP27815 886 aa11.6□□□□□ -0.55
CCDC66-216ENST00000476142 PPM1GO15355 546 aaPredicted RBP11.59□□□□□ -0.55
CCDC66-216ENST00000476142 SPATA31D1Q6ZQQ2 1576 aa11.59□□□□□ -0.55
CCDC66-216ENST00000476142 CENPQQ7L2Z9 268 aaPredicted RBP11.58□□□□□ -0.56
CCDC66-216ENST00000476142 TXNDC2Q86VQ3 553 aa11.58□□□□□ -0.56
CCDC66-216ENST00000476142 ARHGEF40Q8TER5 1519 aa11.58□□□□□ -0.56
CCDC66-216ENST00000476142 IQSEC2Q5JU85 1478 aa11.58□□□□□ -0.56
CCDC66-216ENST00000476142 BCL2L13Q9BXK5 485 aa11.58□□□□□ -0.56
CCDC66-216ENST00000476142 NOP58Q9Y2X3 529 aaKnown RBP11.58□□□□□ -0.56
CCDC66-216ENST00000476142 CD163L1Q9NR16 1453 aa11.58□□□□□ -0.56
CCDC66-216ENST00000476142 KDM2BQ8NHM5 1336 aa11.57□□□□□ -0.56
CCDC66-216ENST00000476142 MAPK8IP3Q9UPT6 1336 aa11.57□□□□□ -0.56
CCDC66-216ENST00000476142 MS4A1P11836 297 aa11.57□□□□□ -0.56
CCDC66-216ENST00000476142 PLPPR3Q6T4P5 718 aa11.57□□□□□ -0.56
CCDC66-216ENST00000476142 WDR63Q8IWG1 891 aa11.57□□□□□ -0.56
CCDC66-216ENST00000476142 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.57□□□□□ -0.56
CCDC66-216ENST00000476142 PANK1Q8TE04 598 aa11.57□□□□□ -0.56
CCDC66-216ENST00000476142 FBLN1P23142 703 aa11.56□□□□□ -0.56
CCDC66-216ENST00000476142 MYH16Q9H6N6 1097 aa11.56□□□□□ -0.56
CCDC66-216ENST00000476142 COG6Q9Y2V7 657 aa11.56□□□□□ -0.56
CCDC66-216ENST00000476142 METP08581 1390 aa11.56□□□□□ -0.56
CCDC66-216ENST00000476142 IPO9Q96P70 1041 aaKnown RBP11.56□□□□□ -0.56
CCDC66-216ENST00000476142 BACH2Q9BYV9 841 aa11.56□□□□□ -0.56
CCDC66-216ENST00000476142 DIAPH1O60610 1272 aaKnown RBP11.55□□□□□ -0.56
CCDC66-216ENST00000476142 RARSP54136 660 aaKnown RBP11.55□□□□□ -0.56
CCDC66-216ENST00000476142 CCDC27Q2M243 656 aa11.55□□□□□ -0.56
CCDC66-216ENST00000476142 TNRQ92752 1358 aa11.55□□□□□ -0.56
CCDC66-216ENST00000476142 PAK3O75914 559 aaPredicted RBP11.55□□□□□ -0.56
CCDC66-216ENST00000476142 HDGFP51858 240 aaKnown RBP11.55□□□□□ -0.56
CCDC66-216ENST00000476142 RGS3P49796 1198 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms