RNA–Protein interactions for RNA: ENST00000476139.5

TVP23B-202, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 1 (best) BASIC

Gene TVP23B, Length 2,989 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-202ENST00000476139 SPINK5Q9NQ38 1064 aaPredicted RBP21.95■■□□□ 1.1
TVP23B-202ENST00000476139 MYO5BQ9ULV0 1848 aa21.94■■□□□ 1.1
TVP23B-202ENST00000476139 PREX1Q8TCU6 1659 aa21.93■■□□□ 1.1
TVP23B-202ENST00000476139 TMEM131LA2VDJ0 1609 aa21.92■■□□□ 1.1
TVP23B-202ENST00000476139 ZFYVE9O95405 1425 aa21.92■■□□□ 1.1
TVP23B-202ENST00000476139 C20orf194Q5TEA3 1177 aa21.92■■□□□ 1.1
TVP23B-202ENST00000476139 TULP4Q9NRJ4 1543 aa21.92■■□□□ 1.1
TVP23B-202ENST00000476139 PRAM1Q96QH2 718 aa21.91■■□□□ 1.1
TVP23B-202ENST00000476139 SRPK2P78362 688 aaKnown RBP21.91■■□□□ 1.1
TVP23B-202ENST00000476139 MINK1Q8N4C8 1332 aaPredicted RBP21.91■■□□□ 1.1
TVP23B-202ENST00000476139 SLFN5Q08AF3 891 aa21.9■■□□□ 1.1
TVP23B-202ENST00000476139 DMRT2Q9Y5R5 561 aa21.9■■□□□ 1.1
TVP23B-202ENST00000476139 CGNL1Q0VF96 1302 aa21.9■■□□□ 1.1
TVP23B-202ENST00000476139 ARHGEF28Q8N1W1 1705 aaKnown RBP21.9■■□□□ 1.1
TVP23B-202ENST00000476139 MTHFSP49914 203 aa21.89■■□□□ 1.1
TVP23B-202ENST00000476139 POLR3AO14802 1390 aaPredicted RBP21.89■■□□□ 1.09
TVP23B-202ENST00000476139 CRBNQ96SW2 442 aa21.89■■□□□ 1.09
TVP23B-202ENST00000476139 POGKQ9P215 609 aa21.88■■□□□ 1.09
TVP23B-202ENST00000476139 PUS7Q96PZ0 661 aaKnown RBP21.87■■□□□ 1.09
TVP23B-202ENST00000476139 NEUROD2Q15784 382 aa21.86■■□□□ 1.09
TVP23B-202ENST00000476139 ANKRD36BQ8N2N9 1353 aa21.86■■□□□ 1.09
TVP23B-202ENST00000476139 TRMT2AQ8IZ69 625 aaKnown RBP21.85■■□□□ 1.09
TVP23B-202ENST00000476139 YTHDC2Q9H6S0 1430 aaKnown RBP21.84■■□□□ 1.09
TVP23B-202ENST00000476139 RRP7AQ9Y3A4 280 aaKnown RBP21.83■■□□□ 1.09
TVP23B-202ENST00000476139 PTPRMP28827 1452 aa21.83■■□□□ 1.09
TVP23B-202ENST00000476139 PPP6R1Q9UPN7 881 aa21.82■■□□□ 1.08
TVP23B-202ENST00000476139 A0A1W2PP64 1363 aa21.82■■□□□ 1.08
TVP23B-202ENST00000476139 WWC1Q8IX03 1113 aa21.81■■□□□ 1.08
TVP23B-202ENST00000476139 GGNBP2Q9H3C7 697 aa21.81■■□□□ 1.08
TVP23B-202ENST00000476139 WAPLQ7Z5K2 1190 aa21.81■■□□□ 1.08
TVP23B-202ENST00000476139 PAK3O75914 559 aaPredicted RBP21.8■■□□□ 1.08
TVP23B-202ENST00000476139 CLTCQ00610 1675 aaKnown RBP21.8■■□□□ 1.08
TVP23B-202ENST00000476139 AGLP35573 1532 aa21.8■■□□□ 1.08
TVP23B-202ENST00000476139 SKAP1Q86WV1 359 aa21.79■■□□□ 1.08
TVP23B-202ENST00000476139 ALKQ9UM73 1620 aa21.79■■□□□ 1.08
TVP23B-202ENST00000476139 CDK19Q9BWU1 502 aa21.78■■□□□ 1.08
TVP23B-202ENST00000476139 E9PSI1 815 aa21.78■■□□□ 1.08
TVP23B-202ENST00000476139 BCAR3O75815 825 aa21.78■■□□□ 1.08
TVP23B-202ENST00000476139 TCP11L2Q8N4U5 519 aa21.78■■□□□ 1.08
TVP23B-202ENST00000476139 A2ML1A8K2U0 1454 aa21.78■■□□□ 1.08
TVP23B-202ENST00000476139 RUNDC1Q96C34 613 aa21.76■■□□□ 1.07
TVP23B-202ENST00000476139 CABP1Q9NZU7 370 aa21.76■■□□□ 1.07
TVP23B-202ENST00000476139 REREQ9P2R6 1566 aa21.76■■□□□ 1.07
TVP23B-202ENST00000476139 FYB1O15117 783 aa21.75■■□□□ 1.07
TVP23B-202ENST00000476139 NPM2Q86SE8 214 aaKnown RBP21.75■■□□□ 1.07
TVP23B-202ENST00000476139 CFAP53Q96M91 514 aa21.75■■□□□ 1.07
TVP23B-202ENST00000476139 SHPRHQ149N8 1683 aa21.75■■□□□ 1.07
TVP23B-202ENST00000476139 ESF1Q9H501 851 aaKnown RBP21.74■■□□□ 1.07
TVP23B-202ENST00000476139 NKTRP30414 1462 aaKnown RBP21.74■■□□□ 1.07
TVP23B-202ENST00000476139 U2AF1L5P0DN76 240 aaPredicted RBP21.74■■□□□ 1.07
TVP23B-202ENST00000476139 U2AF1Q01081 240 aaKnown RBP eCLIP21.74■■□□□ 1.07
TVP23B-202ENST00000476139 RIMS2Q9UQ26 1411 aa21.73■■□□□ 1.07
TVP23B-202ENST00000476139 ZMYM3Q14202 1370 aa21.73■■□□□ 1.07
TVP23B-202ENST00000476139 ABCC11Q96J66 1382 aa21.73■■□□□ 1.07
TVP23B-202ENST00000476139 TERF2IPQ9NYB0 399 aa21.73■■□□□ 1.07
TVP23B-202ENST00000476139 USP32Q8NFA0 1604 aa21.73■■□□□ 1.07
TVP23B-202ENST00000476139 NOP58Q9Y2X3 529 aaKnown RBP21.73■■□□□ 1.07
TVP23B-202ENST00000476139 ATAD2Q6PL18 1390 aa21.73■■□□□ 1.07
TVP23B-202ENST00000476139 NBR1Q14596 966 aa21.72■■□□□ 1.07
TVP23B-202ENST00000476139 NSD2O96028 1365 aa21.72■■□□□ 1.07
TVP23B-202ENST00000476139 NGEFQ8N5V2 710 aa21.72■■□□□ 1.07
TVP23B-202ENST00000476139 CD163L1Q9NR16 1453 aa21.71■■□□□ 1.07
TVP23B-202ENST00000476139 SPATA31D1Q6ZQQ2 1576 aa21.71■■□□□ 1.07
TVP23B-202ENST00000476139 NINLQ9Y2I6 1382 aa21.7■■□□□ 1.06
TVP23B-202ENST00000476139 ANP32AP39687 249 aaKnown RBP21.69■■□□□ 1.06
TVP23B-202ENST00000476139 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.69■■□□□ 1.06
TVP23B-202ENST00000476139 ARHGEF40Q8TER5 1519 aa21.69■■□□□ 1.06
TVP23B-202ENST00000476139 FBLN1P23142 703 aa21.69■■□□□ 1.06
TVP23B-202ENST00000476139 KIF13AQ9H1H9 1805 aa21.68■■□□□ 1.06
TVP23B-202ENST00000476139 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.68■■□□□ 1.063e-6■■■■□ 22.5
TVP23B-202ENST00000476139 U2SURPO15042 1029 aaKnown RBP21.67■■□□□ 1.06
TVP23B-202ENST00000476139 HDGFL2Q7Z4V5 671 aaPredicted RBP21.67■■□□□ 1.06
TVP23B-202ENST00000476139 TXNDC2Q86VQ3 553 aa21.67■■□□□ 1.06
TVP23B-202ENST00000476139 METP08581 1390 aa21.67■■□□□ 1.06
TVP23B-202ENST00000476139 PHF23Q9BUL5 403 aaPredicted RBP21.66■■□□□ 1.06
TVP23B-202ENST00000476139 TCERG1O14776 1098 aaKnown RBP21.66■■□□□ 1.06
TVP23B-202ENST00000476139 IQSEC2Q5JU85 1478 aa21.64■■□□□ 1.05
TVP23B-202ENST00000476139 IPO9Q96P70 1041 aaKnown RBP21.63■■□□□ 1.05
TVP23B-202ENST00000476139 NLRP1Q9C000 1473 aa21.63■■□□□ 1.05
TVP23B-202ENST00000476139 KDM2BQ8NHM5 1336 aa21.62■■□□□ 1.05
TVP23B-202ENST00000476139 NCKAP5LQ9HCH0 1330 aa21.62■■□□□ 1.05
TVP23B-202ENST00000476139 PDE4AP27815 886 aa21.62■■□□□ 1.05
TVP23B-202ENST00000476139 WDR63Q8IWG1 891 aa21.61■■□□□ 1.05
TVP23B-202ENST00000476139 ZBTB47Q9UFB7 747 aaPredicted RBP21.61■■□□□ 1.05
TVP23B-202ENST00000476139 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.6■■□□□ 1.05
TVP23B-202ENST00000476139 PLEKHF1Q96S99 279 aa21.6■■□□□ 1.05
TVP23B-202ENST00000476139 PPM1GO15355 546 aaPredicted RBP21.6■■□□□ 1.05
TVP23B-202ENST00000476139 FRAT1Q92837 279 aaPredicted RBP21.6■■□□□ 1.05
TVP23B-202ENST00000476139 CCDC27Q2M243 656 aa21.6■■□□□ 1.05
TVP23B-202ENST00000476139 BCL2L13Q9BXK5 485 aa21.59■■□□□ 1.05
TVP23B-202ENST00000476139 CEBPAP49715 358 aaPredicted RBP21.59■■□□□ 1.05
TVP23B-202ENST00000476139 PANK1Q8TE04 598 aa21.59■■□□□ 1.05
TVP23B-202ENST00000476139 WASLO00401 505 aaPredicted RBP21.58■■□□□ 1.05
TVP23B-202ENST00000476139 RARSP54136 660 aaKnown RBP21.58■■□□□ 1.04
TVP23B-202ENST00000476139 TNRQ92752 1358 aa21.57■■□□□ 1.04
TVP23B-202ENST00000476139 SETD1AO15047 1707 aaKnown RBP21.57■■□□□ 1.04
TVP23B-202ENST00000476139 CANXP27824 592 aaKnown RBP21.57■■□□□ 1.04
TVP23B-202ENST00000476139 PLPPR3Q6T4P5 718 aa21.57■■□□□ 1.04
TVP23B-202ENST00000476139 BACH2Q9BYV9 841 aa21.57■■□□□ 1.04
TVP23B-202ENST00000476139 CENPQQ7L2Z9 268 aaPredicted RBP21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms