RNA–Protein interactions for RNA: ENST00000476135.5

HDAC9-223, Transcript of histone deacetylase 9, human

TSL 5

Gene HDAC9, Length 1,115 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC9-223	ENST00000476135	CHD2	O14647	1828 aa	Known RBP	11.71	□□□□□ -0.54
HDAC9-223	ENST00000476135	EFCAB6	Q5THR3	1501 aa		11.7	□□□□□ -0.54
HDAC9-223	ENST00000476135	VASP	P50552	380 aa	Predicted RBP	11.7	□□□□□ -0.54
HDAC9-223	ENST00000476135	C7	P10643	843 aa		11.69	□□□□□ -0.54
HDAC9-223	ENST00000476135	NGLY1	Q96IV0	654 aa		11.69	□□□□□ -0.54
HDAC9-223	ENST00000476135	CEP162	Q5TB80	1403 aa		11.69	□□□□□ -0.54
HDAC9-223	ENST00000476135	TIE1	P35590	1138 aa		11.68	□□□□□ -0.54
HDAC9-223	ENST00000476135	CADPS2	Q86UW7	1296 aa		11.68	□□□□□ -0.54
HDAC9-223	ENST00000476135	CCDC125	Q86Z20	511 aa		11.68	□□□□□ -0.54
HDAC9-223	ENST00000476135	SGIP1	Q9BQI5	828 aa		11.68	□□□□□ -0.54
HDAC9-223	ENST00000476135	PCDHB13	Q9Y5F0	798 aa		11.68	□□□□□ -0.54
HDAC9-223	ENST00000476135	EHBP1L1	Q8N3D4	1523 aa		11.68	□□□□□ -0.54
HDAC9-223	ENST00000476135	MAST1	Q9Y2H9	1570 aa		11.67	□□□□□ -0.54
HDAC9-223	ENST00000476135	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	11.67	□□□□□ -0.54
HDAC9-223	ENST00000476135	OTUD5	Q96G74	571 aa		11.67	□□□□□ -0.54
HDAC9-223	ENST00000476135	SETD5	Q9C0A6	1442 aa		11.66	□□□□□ -0.54
HDAC9-223	ENST00000476135	LRP5	O75197	1615 aa		11.65	□□□□□ -0.54
HDAC9-223	ENST00000476135	ATF3	P18847	181 aa		11.65	□□□□□ -0.54
HDAC9-223	ENST00000476135	IDI1	Q13907	227 aa		11.65	□□□□□ -0.54
HDAC9-223	ENST00000476135	C8orf37	Q96NL8	207 aa		11.65	□□□□□ -0.54
HDAC9-223	ENST00000476135	DCAF8	Q5TAQ9	597 aa		11.64	□□□□□ -0.55
HDAC9-223	ENST00000476135	BRINP3	Q76B58	766 aa		11.64	□□□□□ -0.55
HDAC9-223	ENST00000476135	BCAN	Q96GW7	911 aa		11.64	□□□□□ -0.55
HDAC9-223	ENST00000476135	C19orf44	Q9H6X5	657 aa		11.64	□□□□□ -0.55
HDAC9-223	ENST00000476135	TTLL13P	A6NNM8	815 aa		11.63	□□□□□ -0.55
HDAC9-223	ENST00000476135	C14orf37	Q86TY3	774 aa		11.63	□□□□□ -0.55
HDAC9-223	ENST00000476135	ADGRB3	O60242	1522 aa		11.62	□□□□□ -0.55
HDAC9-223	ENST00000476135	IFNL1	Q8IU54	200 aa		11.62	□□□□□ -0.55
HDAC9-223	ENST00000476135	KLHL34	Q8N239	644 aa		11.62	□□□□□ -0.55
HDAC9-223	ENST00000476135	LRRC59	Q96AG4	307 aa	Known RBP	11.62	□□□□□ -0.55
HDAC9-223	ENST00000476135	DUOX2	Q9NRD8	1548 aa		11.61	□□□□□ -0.55
HDAC9-223	ENST00000476135	NHSL1	Q5SYE7	1610 aa		11.61	□□□□□ -0.55
HDAC9-223	ENST00000476135	PLEKHG1	Q9ULL1	1385 aa		11.61	□□□□□ -0.55
HDAC9-223	ENST00000476135	POTEJ	P0CG39	1038 aa		11.6	□□□□□ -0.55
HDAC9-223	ENST00000476135	TBX22	Q9Y458	520 aa		11.6	□□□□□ -0.55
HDAC9-223	ENST00000476135	ASXL1	Q8IXJ9	1541 aa		11.6	□□□□□ -0.55
HDAC9-223	ENST00000476135	EP400	Q96L91	3159 aa		11.59	□□□□□ -0.55
HDAC9-223	ENST00000476135	PNPLA6	Q8IY17	1366 aa		11.59	□□□□□ -0.55
HDAC9-223	ENST00000476135	TRPC5	Q9UL62	973 aa	Predicted RBP	11.59	□□□□□ -0.55
HDAC9-223	ENST00000476135	POTEF	A5A3E0	1075 aa		11.58	□□□□□ -0.56
HDAC9-223	ENST00000476135	ZFYVE9	O95405	1425 aa		11.58	□□□□□ -0.56
HDAC9-223	ENST00000476135	DCC	P43146	1447 aa		11.58	□□□□□ -0.56
HDAC9-223	ENST00000476135	PIK3R4	Q99570	1358 aa		11.57	□□□□□ -0.56
HDAC9-223	ENST00000476135	PYGB	P11216	843 aa		11.57	□□□□□ -0.56
HDAC9-223	ENST00000476135	HDGF	P51858	240 aa	Known RBP	11.57	□□□□□ -0.56
HDAC9-223	ENST00000476135	SLC52A1	Q9NWF4	448 aa		11.57	□□□□□ -0.56
HDAC9-223	ENST00000476135	USP21	Q9UK80	565 aa		11.57	□□□□□ -0.56
HDAC9-223	ENST00000476135	NOS1	P29475	1434 aa		11.57	□□□□□ -0.56
HDAC9-223	ENST00000476135	KANK1	Q14678	1352 aa		11.56	□□□□□ -0.56
HDAC9-223	ENST00000476135	LMTK2	Q8IWU2	1503 aa		11.56	□□□□□ -0.56
HDAC9-223	ENST00000476135	ATRN	O75882	1429 aa		11.56	□□□□□ -0.56
HDAC9-223	ENST00000476135	ERBIN	Q96RT1	1412 aa		11.56	□□□□□ -0.56
HDAC9-223	ENST00000476135	ADAMTS2	O95450	1211 aa		11.55	□□□□□ -0.56
HDAC9-223	ENST00000476135	FNBP4	Q8N3X1	1017 aa	Predicted RBP	11.55	□□□□□ -0.56
HDAC9-223	ENST00000476135	TRIM35	Q9UPQ4	493 aa		11.55	□□□□□ -0.56
HDAC9-223	ENST00000476135	BLM	P54132	1417 aa	Predicted RBP	11.54	□□□□□ -0.56
HDAC9-223	ENST00000476135	PPP1R15A	O75807	674 aa	Predicted RBP	11.54	□□□□□ -0.56
HDAC9-223	ENST00000476135	MYO5B	Q9ULV0	1848 aa		11.53	□□□□□ -0.56
HDAC9-223	ENST00000476135	MST1R	Q04912	1400 aa		11.53	□□□□□ -0.56
HDAC9-223	ENST00000476135	RIMS2	Q9UQ26	1411 aa		11.53	□□□□□ -0.56
HDAC9-223	ENST00000476135	PTCH1	Q13635	1447 aa		11.52	□□□□□ -0.56
HDAC9-223	ENST00000476135	ADAMTS13	Q76LX8	1427 aa		11.52	□□□□□ -0.56
HDAC9-223	ENST00000476135	TMEM106C	Q9BVX2	250 aa		11.52	□□□□□ -0.57
HDAC9-223	ENST00000476135	COLQ	Q9Y215	455 aa	Predicted RBP	11.52	□□□□□ -0.57
HDAC9-223	ENST00000476135	KIF15	Q9NS87	1388 aa		11.52	□□□□□ -0.57
HDAC9-223	ENST00000476135	GSE1	Q14687	1217 aa		11.51	□□□□□ -0.57
HDAC9-223	ENST00000476135	IFNLR1	Q8IU57	520 aa	Predicted RBP	11.51	□□□□□ -0.57
HDAC9-223	ENST00000476135	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	11.51	□□□□□ -0.57
HDAC9-223	ENST00000476135	GCC2	Q8IWJ2	1684 aa		11.5	□□□□□ -0.57
HDAC9-223	ENST00000476135	AMOTL2	Q9Y2J4	779 aa		11.5	□□□□□ -0.57
HDAC9-223	ENST00000476135	TRPM2	O94759	1503 aa		11.5	□□□□□ -0.57
HDAC9-223	ENST00000476135	TMEM131L	A2VDJ0	1609 aa		11.49	□□□□□ -0.57
HDAC9-223	ENST00000476135	IER5L	Q5T953	404 aa		11.49	□□□□□ -0.57
HDAC9-223	ENST00000476135	MAMSTR	Q6ZN01	415 aa		11.49	□□□□□ -0.57
HDAC9-223	ENST00000476135	DEFB132	Q7Z7B7	95 aa		11.49	□□□□□ -0.57
HDAC9-223	ENST00000476135	DDX17	Q92841	729 aa	Known RBP	11.49	□□□□□ -0.57
HDAC9-223	ENST00000476135	PCDHB8	Q9UN66	801 aa		11.49	□□□□□ -0.57
HDAC9-223	ENST00000476135	LAMC1	P11047	1609 aa		11.49	□□□□□ -0.57
HDAC9-223	ENST00000476135	SEC24B	O95487	1268 aa		11.48	□□□□□ -0.57
HDAC9-223	ENST00000476135	HRC	P23327	699 aa		11.48	□□□□□ -0.57
HDAC9-223	ENST00000476135	SF3B2	Q13435	895 aa	Known RBP	11.48	□□□□□ -0.57
HDAC9-223	ENST00000476135	MYOM3	Q5VTT5	1437 aa		11.48	□□□□□ -0.57
HDAC9-223	ENST00000476135	PTPRU	Q92729	1446 aa		11.48	□□□□□ -0.57
HDAC9-223	ENST00000476135	UNC13B	O14795	1591 aa		11.48	□□□□□ -0.57
HDAC9-223	ENST00000476135	BCL9L	Q86UU0	1499 aa		11.47	□□□□□ -0.57
HDAC9-223	ENST00000476135	YY1	P25490	414 aa		11.47	□□□□□ -0.57
HDAC9-223	ENST00000476135	GJD4	Q96KN9	370 aa	Predicted RBP	11.47	□□□□□ -0.57
HDAC9-223	ENST00000476135	RRP7BP	Q9NSQ0	103 aa		11.47	□□□□□ -0.57
HDAC9-223	ENST00000476135	SPHKAP	Q2M3C7	1700 aa		11.46	□□□□□ -0.57
HDAC9-223	ENST00000476135	COL22A1	Q8NFW1	1626 aa	Predicted RBP	11.46	□□□□□ -0.57
HDAC9-223	ENST00000476135	RPRD2	Q5VT52	1461 aa	Known RBP	11.46	□□□□□ -0.57
HDAC9-223	ENST00000476135	XRN1	Q8IZH2	1706 aa	Known RBP	11.46	□□□□□ -0.58
HDAC9-223	ENST00000476135	SOS2	Q07890	1332 aa	Predicted RBP	11.45	□□□□□ -0.58
HDAC9-223	ENST00000476135	IFFO2	Q5TF58	517 aa		11.45	□□□□□ -0.58
HDAC9-223	ENST00000476135	MARF1	Q9Y4F3	1742 aa	Known RBP	11.45	□□□□□ -0.58
HDAC9-223	ENST00000476135	CROCC2	H7BZ55	1655 aa		11.45	□□□□□ -0.58
HDAC9-223	ENST00000476135	PSD	A5PKW4	1024 aa	Predicted RBP	11.44	□□□□□ -0.58
HDAC9-223	ENST00000476135	SPOCK2	Q92563	424 aa		11.44	□□□□□ -0.58
HDAC9-223	ENST00000476135	SCUBE2	Q9NQ36	999 aa		11.44	□□□□□ -0.58
HDAC9-223	ENST00000476135	BRWD3	Q6RI45	1802 aa		11.44	□□□□□ -0.58

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