RNA–Protein interactions for RNA: ENST00000475775.1

TRIM11-203, Transcript of tripartite motif containing 11, humanhuman

TSL 2

Gene TRIM11, Length 693 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11-203ENST00000475775 PTCH1Q13635 1447 aa22.12■■□□□ 1.13
TRIM11-203ENST00000475775 SOS2Q07890 1332 aaPredicted RBP22.11■■□□□ 1.13
TRIM11-203ENST00000475775 ATRNO75882 1429 aa22.11■■□□□ 1.13
TRIM11-203ENST00000475775 MARF1Q9Y4F3 1742 aaKnown RBP22.11■■□□□ 1.13
TRIM11-203ENST00000475775 ORAI2Q96SN7 254 aa22.1■■□□□ 1.13
TRIM11-203ENST00000475775 PRAG1Q86YV5 1406 aa22.07■■□□□ 1.12
TRIM11-203ENST00000475775 COL22A1Q8NFW1 1626 aaPredicted RBP22.07■■□□□ 1.12
TRIM11-203ENST00000475775 CCDC144AA2RUR9 1427 aa22.06■■□□□ 1.12
TRIM11-203ENST00000475775 ACIN1Q9UKV3 1341 aaKnown RBP22.04■■□□□ 1.12
TRIM11-203ENST00000475775 BRWD3Q6RI45 1802 aa22.03■■□□□ 1.12
TRIM11-203ENST00000475775 BCL9LQ86UU0 1499 aa22.03■■□□□ 1.12
TRIM11-203ENST00000475775 PPLO60437 1756 aa22.02■■□□□ 1.11
TRIM11-203ENST00000475775 GJD4Q96KN9 370 aaPredicted RBP22.01■■□□□ 1.11
TRIM11-203ENST00000475775 ROBO2Q9HCK4 1378 aa22■■□□□ 1.11
TRIM11-203ENST00000475775 MYOM2P54296 1465 aa21.98■■□□□ 1.11
TRIM11-203ENST00000475775 ANKRD30BQ9BXX2 1392 aa21.98■■□□□ 1.11
TRIM11-203ENST00000475775 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.97■■□□□ 1.11
TRIM11-203ENST00000475775 DEFB132Q7Z7B7 95 aa21.96■■□□□ 1.11
TRIM11-203ENST00000475775 MPHOSPH9Q99550 1183 aa21.96■■□□□ 1.11
TRIM11-203ENST00000475775 BLMP54132 1417 aaPredicted RBP21.96■■□□□ 1.11
TRIM11-203ENST00000475775 NPHP3Q7Z494 1330 aa21.94■■□□□ 1.1
TRIM11-203ENST00000475775 SPATA31E1Q6ZUB1 1445 aa21.94■■□□□ 1.1
TRIM11-203ENST00000475775 GLI3P10071 1580 aa21.93■■□□□ 1.1
TRIM11-203ENST00000475775 ESCO1Q5FWF5 840 aa21.93■■□□□ 1.1
TRIM11-203ENST00000475775 CDC42BPGQ6DT37 1551 aa21.93■■□□□ 1.1
TRIM11-203ENST00000475775 LRP5O75197 1615 aa21.92■■□□□ 1.1
TRIM11-203ENST00000475775 XPCQ01831 940 aaPredicted RBP21.91■■□□□ 1.1
TRIM11-203ENST00000475775 RGL3Q3MIN7 710 aa21.91■■□□□ 1.1
TRIM11-203ENST00000475775 PXDNQ92626 1479 aa21.9■■□□□ 1.1
TRIM11-203ENST00000475775 TECPR2O15040 1411 aa21.9■■□□□ 1.1
TRIM11-203ENST00000475775 ADGRF5Q8IZF2 1346 aa21.9■■□□□ 1.1
TRIM11-203ENST00000475775 FOXO3O43524 673 aa21.9■■□□□ 1.1
TRIM11-203ENST00000475775 SF3B2Q13435 895 aaKnown RBP21.9■■□□□ 1.1
TRIM11-203ENST00000475775 UNC5CLQ8IV45 518 aa21.9■■□□□ 1.1
TRIM11-203ENST00000475775 RALGAPBQ86X10 1494 aa21.9■■□□□ 1.1
TRIM11-203ENST00000475775 IFT172Q9UG01 1749 aa21.89■■□□□ 1.09
TRIM11-203ENST00000475775 PIK3C2GO75747 1445 aa21.89■■□□□ 1.09
TRIM11-203ENST00000475775 LRPPRCP42704 1394 aaKnown RBP21.87■■□□□ 1.09
TRIM11-203ENST00000475775 SLIT2O94813 1529 aa21.86■■□□□ 1.09
TRIM11-203ENST00000475775 KNDC1Q76NI1 1749 aa21.85■■□□□ 1.09
TRIM11-203ENST00000475775 ABCC11Q96J66 1382 aa21.85■■□□□ 1.09
TRIM11-203ENST00000475775 SEPT12Q8IYM1 358 aa21.84■■□□□ 1.09
TRIM11-203ENST00000475775 STK26Q9P289 416 aa21.83■■□□□ 1.09
TRIM11-203ENST00000475775 NUTM2FA1L443 756 aa21.82■■□□□ 1.08
TRIM11-203ENST00000475775 PSDA5PKW4 1024 aaPredicted RBP21.82■■□□□ 1.08
TRIM11-203ENST00000475775 YTHDC2Q9H6S0 1430 aaKnown RBP21.8■■□□□ 1.08
TRIM11-203ENST00000475775 USP32Q8NFA0 1604 aa21.8■■□□□ 1.08
TRIM11-203ENST00000475775 RGPD8O14715 1765 aaPredicted RBP21.79■■□□□ 1.08
TRIM11-203ENST00000475775 HRCP23327 699 aa21.78■■□□□ 1.08
TRIM11-203ENST00000475775 TMEM132EQ6IEE7 984 aa21.78■■□□□ 1.08
TRIM11-203ENST00000475775 WAPLQ7Z5K2 1190 aa21.78■■□□□ 1.08
TRIM11-203ENST00000475775 SPATA31A3Q5VYP0 1347 aa21.78■■□□□ 1.08
TRIM11-203ENST00000475775 NWD2Q9ULI1 1742 aa21.77■■□□□ 1.08
TRIM11-203ENST00000475775 NRXN1Q9ULB1 1477 aa21.77■■□□□ 1.08
TRIM11-203ENST00000475775 PLCH1Q4KWH8 1693 aa21.77■■□□□ 1.08
TRIM11-203ENST00000475775 KRT27Q7Z3Y8 459 aa21.77■■□□□ 1.08
TRIM11-203ENST00000475775 SIRT1Q96EB6 747 aa21.77■■□□□ 1.08
TRIM11-203ENST00000475775 DHX57Q6P158 1386 aaKnown RBP21.76■■□□□ 1.07
TRIM11-203ENST00000475775 RAB3GAP2Q9H2M9 1393 aa21.76■■□□□ 1.07
TRIM11-203ENST00000475775 ONECUT3O60422 494 aaPredicted RBP21.76■■□□□ 1.07
TRIM11-203ENST00000475775 VPS72Q15906 364 aa21.76■■□□□ 1.07
TRIM11-203ENST00000475775 CCDC9Q9Y3X0 531 aaKnown RBP21.76■■□□□ 1.07
TRIM11-203ENST00000475775 KIF1AQ12756 1690 aa21.75■■□□□ 1.07
TRIM11-203ENST00000475775 PLEKHH1Q9ULM0 1364 aa21.75■■□□□ 1.07
TRIM11-203ENST00000475775 BAG6P46379 1132 aa21.75■■□□□ 1.07
TRIM11-203ENST00000475775 C14orf93Q9H972 538 aaKnown RBP21.75■■□□□ 1.07
TRIM11-203ENST00000475775 HAP1P54257 671 aaPredicted RBP21.74■■□□□ 1.07
TRIM11-203ENST00000475775 FMN2Q9NZ56 1722 aa21.73■■□□□ 1.07
TRIM11-203ENST00000475775 KRT28Q7Z3Y7 464 aa21.73■■□□□ 1.07
TRIM11-203ENST00000475775 CABLES1Q8TDN4 633 aa21.72■■□□□ 1.07
TRIM11-203ENST00000475775 PLEKHG5O94827 1062 aa21.71■■□□□ 1.07
TRIM11-203ENST00000475775 A0A0G2JS52 829 aa21.69■■□□□ 1.06
TRIM11-203ENST00000475775 MYT1Q01538 1121 aa21.69■■□□□ 1.06
TRIM11-203ENST00000475775 CFAP70Q5T0N1 1121 aa21.69■■□□□ 1.06
TRIM11-203ENST00000475775 DLC1Q96QB1 1528 aa21.69■■□□□ 1.06
TRIM11-203ENST00000475775 RGPD1P0DJD0 1748 aa21.69■■□□□ 1.06
TRIM11-203ENST00000475775 ABCA3Q99758 1704 aa21.69■■□□□ 1.06
TRIM11-203ENST00000475775 EN1Q05925 392 aaPredicted RBP21.68■■□□□ 1.06
TRIM11-203ENST00000475775 PSME1Q06323 249 aa21.65■■□□□ 1.06
TRIM11-203ENST00000475775 R3HDM1Q15032 1099 aaKnown RBP21.65■■□□□ 1.06
TRIM11-203ENST00000475775 PRAM1Q96QH2 718 aa21.65■■□□□ 1.06
TRIM11-203ENST00000475775 TNS3Q68CZ2 1445 aa21.64■■□□□ 1.06
TRIM11-203ENST00000475775 STAC3Q96MF2 364 aa21.64■■□□□ 1.05
TRIM11-203ENST00000475775 POGKQ9P215 609 aa21.64■■□□□ 1.05
TRIM11-203ENST00000475775 PHF8Q9UPP1 1060 aa21.64■■□□□ 1.05
TRIM11-203ENST00000475775 ANKARQ7Z5J8 1434 aa21.63■■□□□ 1.05
TRIM11-203ENST00000475775 FAM83GA6ND36 823 aa21.63■■□□□ 1.05
TRIM11-203ENST00000475775 FAM98CQ17RN3 349 aaKnown RBP21.63■■□□□ 1.05
TRIM11-203ENST00000475775 LMOD2Q6P5Q4 547 aa21.63■■□□□ 1.05
TRIM11-203ENST00000475775 NRAPQ86VF7 1730 aa21.63■■□□□ 1.05
TRIM11-203ENST00000475775 EIF3AQ14152 1382 aaKnown RBP21.62■■□□□ 1.05
TRIM11-203ENST00000475775 ADGRB2O60241 1585 aa21.62■■□□□ 1.05
TRIM11-203ENST00000475775 ADGRB1O14514 1584 aa21.61■■□□□ 1.05
TRIM11-203ENST00000475775 FAM182BQ5T319 152 aa21.61■■□□□ 1.05
TRIM11-203ENST00000475775 SAFB2Q14151 953 aaKnown RBP eCLIP21.6■■□□□ 1.05
TRIM11-203ENST00000475775 TNS1Q9HBL0 1735 aaKnown RBP21.6■■□□□ 1.05
TRIM11-203ENST00000475775 SBNO1A3KN83 1393 aa21.6■■□□□ 1.05
TRIM11-203ENST00000475775 ARHGEF10O15013 1369 aa21.6■■□□□ 1.05
TRIM11-203ENST00000475775 DCAF11Q8TEB1 546 aa21.58■■□□□ 1.05
TRIM11-203ENST00000475775 BTG4Q9NY30 223 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms