RNA–Protein interactions for RNA: ENST00000475684.2

CCHCR1-212, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 5

Gene CCHCR1, Length 786 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-212ENST00000475684 SPHKAPQ2M3C7 1700 aa15.77■□□□□ 0.12
CCHCR1-212ENST00000475684 METP08581 1390 aa15.77■□□□□ 0.12
CCHCR1-212ENST00000475684 MARF1Q9Y4F3 1742 aaKnown RBP15.77■□□□□ 0.11
CCHCR1-212ENST00000475684 KRT27Q7Z3Y8 459 aa15.76■□□□□ 0.11
CCHCR1-212ENST00000475684 PTPN23Q9H3S7 1636 aa15.75■□□□□ 0.11
CCHCR1-212ENST00000475684 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.74■□□□□ 0.11
CCHCR1-212ENST00000475684 NRXN3Q9Y4C0 1643 aa15.74■□□□□ 0.11
CCHCR1-212ENST00000475684 EN1Q05925 392 aaPredicted RBP15.73■□□□□ 0.11
CCHCR1-212ENST00000475684 NPHP3Q7Z494 1330 aa15.71■□□□□ 0.11
CCHCR1-212ENST00000475684 CCDC9Q9Y3X0 531 aaKnown RBP15.71■□□□□ 0.11
CCHCR1-212ENST00000475684 SLIT2O94813 1529 aa15.71■□□□□ 0.11
CCHCR1-212ENST00000475684 DCAF8L1A6NGE4 600 aa15.7■□□□□ 0.1
CCHCR1-212ENST00000475684 ONECUT3O60422 494 aaPredicted RBP15.7■□□□□ 0.1
CCHCR1-212ENST00000475684 XPCQ01831 940 aaPredicted RBP15.7■□□□□ 0.1
CCHCR1-212ENST00000475684 ESCO1Q5FWF5 840 aa15.7■□□□□ 0.1
CCHCR1-212ENST00000475684 VPS72Q15906 364 aa15.69■□□□□ 0.1
CCHCR1-212ENST00000475684 ZNF326Q5BKZ1 582 aaKnown RBP15.69■□□□□ 0.1
CCHCR1-212ENST00000475684 A0A0G2JS52 829 aa15.68■□□□□ 0.1
CCHCR1-212ENST00000475684 MYT1Q01538 1121 aa15.68■□□□□ 0.1
CCHCR1-212ENST00000475684 ANKRD50Q9ULJ7 1429 aa15.68■□□□□ 0.1
CCHCR1-212ENST00000475684 PXDNQ92626 1479 aa15.67■□□□□ 0.1
CCHCR1-212ENST00000475684 FOXO3O43524 673 aa15.67■□□□□ 0.1
CCHCR1-212ENST00000475684 E9PCH4 1651 aa15.67■□□□□ 0.1
CCHCR1-212ENST00000475684 SENP3-EIF4A1A0A087X0R7 540 aa15.66■□□□□ 0.1
CCHCR1-212ENST00000475684 IQGAP3Q86VI3 1631 aa15.64■□□□□ 0.09
CCHCR1-212ENST00000475684 ADGRL2O95490 1459 aa15.64■□□□□ 0.09
CCHCR1-212ENST00000475684 LRPPRCP42704 1394 aaKnown RBP15.63■□□□□ 0.09
CCHCR1-212ENST00000475684 ROBO2Q9HCK4 1378 aa15.63■□□□□ 0.09
CCHCR1-212ENST00000475684 VPS8Q8N3P4 1428 aa15.63■□□□□ 0.09
CCHCR1-212ENST00000475684 HAP1P54257 671 aaPredicted RBP15.63■□□□□ 0.09
CCHCR1-212ENST00000475684 EZH2Q15910 746 aaKnown RBP15.63■□□□□ 0.09
CCHCR1-212ENST00000475684 PPP4R3CPQ6ZMV5 832 aa15.62■□□□□ 0.09
CCHCR1-212ENST00000475684 PPP1R1BQ9UD71 204 aaPredicted RBP15.62■□□□□ 0.09
CCHCR1-212ENST00000475684 RGPD1P0DJD0 1748 aa15.61■□□□□ 0.09
CCHCR1-212ENST00000475684 FAM182BQ5T319 152 aa15.61■□□□□ 0.09
CCHCR1-212ENST00000475684 FAM98CQ17RN3 349 aaKnown RBP15.6■□□□□ 0.09
CCHCR1-212ENST00000475684 USP32Q8NFA0 1604 aa15.6■□□□□ 0.09
CCHCR1-212ENST00000475684 PLEKHG5O94827 1062 aa15.59■□□□□ 0.09
CCHCR1-212ENST00000475684 SPATA31A3Q5VYP0 1347 aa15.59■□□□□ 0.09
CCHCR1-212ENST00000475684 ZNF784Q8NCA9 323 aaPredicted RBP15.58■□□□□ 0.08
CCHCR1-212ENST00000475684 DISP2A7MBM2 1401 aa15.58■□□□□ 0.08
CCHCR1-212ENST00000475684 NUTM2FA1L443 756 aa15.57■□□□□ 0.08
CCHCR1-212ENST00000475684 CABLES1Q8TDN4 633 aa15.57■□□□□ 0.08
CCHCR1-212ENST00000475684 CAMKK2Q96RR4 588 aa15.56■□□□□ 0.08
CCHCR1-212ENST00000475684 HFM1A2PYH4 1435 aa15.56■□□□□ 0.08
CCHCR1-212ENST00000475684 PLCH1Q4KWH8 1693 aa15.56■□□□□ 0.08
CCHCR1-212ENST00000475684 NWD2Q9ULI1 1742 aa15.55■□□□□ 0.08
CCHCR1-212ENST00000475684 C1QTNF8P60827 252 aa15.55■□□□□ 0.08
CCHCR1-212ENST00000475684 SPON1Q9HCB6 807 aa15.55■□□□□ 0.08
CCHCR1-212ENST00000475684 NINLQ9Y2I6 1382 aa15.54■□□□□ 0.08
CCHCR1-212ENST00000475684 KRT28Q7Z3Y7 464 aa15.54■□□□□ 0.08
CCHCR1-212ENST00000475684 NEXMIFQ5QGS0 1516 aa15.53■□□□□ 0.08
CCHCR1-212ENST00000475684 FAM83GA6ND36 823 aa15.53■□□□□ 0.08
CCHCR1-212ENST00000475684 MAPK8IP2Q13387 824 aaPredicted RBP15.53■□□□□ 0.08
CCHCR1-212ENST00000475684 FAM50AQ14320 339 aaKnown RBP15.53■□□□□ 0.08
CCHCR1-212ENST00000475684 NBPF8Q3BBV2 869 aa15.53■□□□□ 0.08
CCHCR1-212ENST00000475684 NBPF14Q5TI25 921 aa15.53■□□□□ 0.08
CCHCR1-212ENST00000475684 CDC42BPGQ6DT37 1551 aa15.53■□□□□ 0.08
CCHCR1-212ENST00000475684 NUP155O75694 1391 aa15.52■□□□□ 0.08
CCHCR1-212ENST00000475684 TNS1Q9HBL0 1735 aaKnown RBP15.52■□□□□ 0.08
CCHCR1-212ENST00000475684 KCNQ2O43526 872 aa15.52■□□□□ 0.08
CCHCR1-212ENST00000475684 TRIM37O94972 964 aa15.52■□□□□ 0.08
CCHCR1-212ENST00000475684 APBA3O96018 575 aa15.52■□□□□ 0.08
CCHCR1-212ENST00000475684 APLP2Q06481 763 aa15.51■□□□□ 0.07
CCHCR1-212ENST00000475684 CCDC144AA2RUR9 1427 aa15.51■□□□□ 0.07
CCHCR1-212ENST00000475684 PRAG1Q86YV5 1406 aa15.51■□□□□ 0.07
CCHCR1-212ENST00000475684 LMOD2Q6P5Q4 547 aa15.5■□□□□ 0.07
CCHCR1-212ENST00000475684 CAMTA1Q9Y6Y1 1673 aa15.5■□□□□ 0.07
CCHCR1-212ENST00000475684 PARD3Q8TEW0 1356 aa15.49■□□□□ 0.07
CCHCR1-212ENST00000475684 ADGRB2O60241 1585 aa15.49■□□□□ 0.07
CCHCR1-212ENST00000475684 VGFO15240 615 aaPredicted RBP15.49■□□□□ 0.07
CCHCR1-212ENST00000475684 PSME1Q06323 249 aa15.49■□□□□ 0.07
CCHCR1-212ENST00000475684 BTG4Q9NY30 223 aa15.49■□□□□ 0.07
CCHCR1-212ENST00000475684 NAIPQ13075 1403 aa15.49■□□□□ 0.07
CCHCR1-212ENST00000475684 TNS3Q68CZ2 1445 aa15.47■□□□□ 0.07
CCHCR1-212ENST00000475684 FAM196AQ6ZSG2 479 aa15.47■□□□□ 0.07
CCHCR1-212ENST00000475684 KIF1AQ12756 1690 aa15.44■□□□□ 0.06
CCHCR1-212ENST00000475684 SPATA31A5Q5VU36 1347 aa15.44■□□□□ 0.06
CCHCR1-212ENST00000475684 SPATA31A7Q8IWB4 1347 aa15.44■□□□□ 0.06
CCHCR1-212ENST00000475684 NRAPQ86VF7 1730 aa15.44■□□□□ 0.06
CCHCR1-212ENST00000475684 WAPLQ7Z5K2 1190 aa15.44■□□□□ 0.06
CCHCR1-212ENST00000475684 CLTCL1P53675 1640 aa15.43■□□□□ 0.06
CCHCR1-212ENST00000475684 RREB1Q92766 1687 aa15.42■□□□□ 0.06
CCHCR1-212ENST00000475684 ARHGEF10O15013 1369 aa15.42■□□□□ 0.06
CCHCR1-212ENST00000475684 STK26Q9P289 416 aa15.42■□□□□ 0.06
CCHCR1-212ENST00000475684 NUP188Q5SRE5 1749 aa15.42■□□□□ 0.06
CCHCR1-212ENST00000475684 ABCA3Q99758 1704 aa15.42■□□□□ 0.06
CCHCR1-212ENST00000475684 PHF8Q9UPP1 1060 aa15.41■□□□□ 0.06
CCHCR1-212ENST00000475684 THSD7AQ9UPZ6 1657 aa15.41■□□□□ 0.06
CCHCR1-212ENST00000475684 SBNO1A3KN83 1393 aa15.4■□□□□ 0.06
CCHCR1-212ENST00000475684 UTRNP46939 3433 aa15.4■□□□□ 0.06
CCHCR1-212ENST00000475684 KIF1BO60333 1816 aa15.38■□□□□ 0.05
CCHCR1-212ENST00000475684 CEP350Q5VT06 3117 aa15.38■□□□□ 0.05
CCHCR1-212ENST00000475684 FMN2Q9NZ56 1722 aa15.38■□□□□ 0.05
CCHCR1-212ENST00000475684 COL14A1Q05707 1796 aaKnown RBP15.38■□□□□ 0.05
CCHCR1-212ENST00000475684 ROCK1Q13464 1354 aa15.37■□□□□ 0.05
CCHCR1-212ENST00000475684 RPGRIP1LQ68CZ1 1315 aa15.37■□□□□ 0.05
CCHCR1-212ENST00000475684 GIGYF1O75420 1035 aaPredicted RBP15.36■□□□□ 0.05
CCHCR1-212ENST00000475684 PDE3BQ13370 1112 aa15.36■□□□□ 0.05
CCHCR1-212ENST00000475684 PLEKHH1Q9ULM0 1364 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 130.4 ms