RNA–Protein interactions for RNA: ENST00000475591.5

UBXN11-214, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best)

Gene UBXN11, Length 2,542 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-214ENST00000475591 PREX1Q8TCU6 1659 aa18.57■□□□□ 0.56
UBXN11-214ENST00000475591 CABP2Q9NPB3 220 aa18.57■□□□□ 0.56
UBXN11-214ENST00000475591 SLC52A1Q9NWF4 448 aa18.57■□□□□ 0.56
UBXN11-214ENST00000475591 DIP2BQ9P265 1576 aa18.56■□□□□ 0.56
UBXN11-214ENST00000475591 DMRT2Q9Y5R5 561 aa18.56■□□□□ 0.56
UBXN11-214ENST00000475591 SLFN5Q08AF3 891 aa18.55■□□□□ 0.56
UBXN11-214ENST00000475591 EVC2Q86UK5 1308 aa18.55■□□□□ 0.56
UBXN11-214ENST00000475591 TMEM131LA2VDJ0 1609 aa18.55■□□□□ 0.56
UBXN11-214ENST00000475591 POLR3AO14802 1390 aaPredicted RBP18.53■□□□□ 0.56
UBXN11-214ENST00000475591 SKAP1Q86WV1 359 aa18.51■□□□□ 0.55
UBXN11-214ENST00000475591 ZFYVE9O95405 1425 aa18.51■□□□□ 0.55
UBXN11-214ENST00000475591 SHPRHQ149N8 1683 aa18.5■□□□□ 0.55
UBXN11-214ENST00000475591 CGNL1Q0VF96 1302 aa18.5■□□□□ 0.55
UBXN11-214ENST00000475591 TRMT2AQ8IZ69 625 aaKnown RBP18.5■□□□□ 0.55
UBXN11-214ENST00000475591 MTHFSP49914 203 aa18.5■□□□□ 0.55
UBXN11-214ENST00000475591 MINK1Q8N4C8 1332 aaPredicted RBP18.49■□□□□ 0.55
UBXN11-214ENST00000475591 MLECQ14165 292 aa18.49■□□□□ 0.55
UBXN11-214ENST00000475591 ANKRD36BQ8N2N9 1353 aa18.49■□□□□ 0.55
UBXN11-214ENST00000475591 SRPK2P78362 688 aaKnown RBP18.48■□□□□ 0.55
UBXN11-214ENST00000475591 NEUROD2Q15784 382 aa18.48■□□□□ 0.55
UBXN11-214ENST00000475591 PRAM1Q96QH2 718 aa18.48■□□□□ 0.55
UBXN11-214ENST00000475591 RRP7AQ9Y3A4 280 aaKnown RBP18.48■□□□□ 0.55
UBXN11-214ENST00000475591 PTPRMP28827 1452 aa18.47■□□□□ 0.55
UBXN11-214ENST00000475591 USP32Q8NFA0 1604 aa18.47■□□□□ 0.55
UBXN11-214ENST00000475591 STAG3Q9UJ98 1225 aa18.47■□□□□ 0.55
UBXN11-214ENST00000475591 A0A1W2PP64 1363 aa18.46■□□□□ 0.55
UBXN11-214ENST00000475591 NKTRP30414 1462 aaKnown RBP18.45■□□□□ 0.54
UBXN11-214ENST00000475591 YTHDC2Q9H6S0 1430 aaKnown RBP18.45■□□□□ 0.54
UBXN11-214ENST00000475591 BCAR3O75815 825 aa18.45■□□□□ 0.54
UBXN11-214ENST00000475591 WWC1Q8IX03 1113 aa18.45■□□□□ 0.54
UBXN11-214ENST00000475591 E9PSI1 815 aa18.45■□□□□ 0.54
UBXN11-214ENST00000475591 PUS7Q96PZ0 661 aaKnown RBP18.45■□□□□ 0.54
UBXN11-214ENST00000475591 CLTCQ00610 1675 aaKnown RBP18.44■□□□□ 0.54
UBXN11-214ENST00000475591 POGKQ9P215 609 aa18.44■□□□□ 0.54
UBXN11-214ENST00000475591 ALKQ9UM73 1620 aa18.43■□□□□ 0.54
UBXN11-214ENST00000475591 BCL11AQ9H165 835 aa18.43■□□□□ 0.54
UBXN11-214ENST00000475591 GGNBP2Q9H3C7 697 aa18.43■□□□□ 0.54
UBXN11-214ENST00000475591 ERICH6Q7L0X2 663 aa18.42■□□□□ 0.54
UBXN11-214ENST00000475591 TCP11L2Q8N4U5 519 aa18.42■□□□□ 0.54
UBXN11-214ENST00000475591 RUNDC1Q96C34 613 aa18.42■□□□□ 0.54
UBXN11-214ENST00000475591 TCERG1O14776 1098 aaKnown RBP18.41■□□□□ 0.54
UBXN11-214ENST00000475591 IQSEC2Q5JU85 1478 aa18.4■□□□□ 0.54
UBXN11-214ENST00000475591 ABCC11Q96J66 1382 aa18.39■□□□□ 0.53
UBXN11-214ENST00000475591 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.39■□□□□ 0.53
UBXN11-214ENST00000475591 CFAP53Q96M91 514 aa18.39■□□□□ 0.53
UBXN11-214ENST00000475591 AGLP35573 1532 aa18.39■□□□□ 0.53
UBXN11-214ENST00000475591 NSD2O96028 1365 aa18.38■□□□□ 0.53
UBXN11-214ENST00000475591 REREQ9P2R6 1566 aa18.38■□□□□ 0.53
UBXN11-214ENST00000475591 A2ML1A8K2U0 1454 aa18.38■□□□□ 0.53
UBXN11-214ENST00000475591 CD163L1Q9NR16 1453 aa18.38■□□□□ 0.53
UBXN11-214ENST00000475591 KDM2BQ8NHM5 1336 aa18.38■□□□□ 0.53
UBXN11-214ENST00000475591 PDE4AP27815 886 aa18.38■□□□□ 0.53
UBXN11-214ENST00000475591 WAPLQ7Z5K2 1190 aa18.38■□□□□ 0.53
UBXN11-214ENST00000475591 PAK3O75914 559 aaPredicted RBP18.37■□□□□ 0.53
UBXN11-214ENST00000475591 U2AF1L5P0DN76 240 aaPredicted RBP18.37■□□□□ 0.53
UBXN11-214ENST00000475591 U2AF1Q01081 240 aaKnown RBP eCLIP18.37■□□□□ 0.53
UBXN11-214ENST00000475591 NGEFQ8N5V2 710 aa18.37■□□□□ 0.53
UBXN11-214ENST00000475591 CDK19Q9BWU1 502 aa18.37■□□□□ 0.53
UBXN11-214ENST00000475591 ATAD2Q6PL18 1390 aa18.36■□□□□ 0.53
UBXN11-214ENST00000475591 FYB1O15117 783 aa18.35■□□□□ 0.53
UBXN11-214ENST00000475591 RIMS2Q9UQ26 1411 aa18.35■□□□□ 0.53
UBXN11-214ENST00000475591 NPM2Q86SE8 214 aaKnown RBP18.35■□□□□ 0.53
UBXN11-214ENST00000475591 CABP1Q9NZU7 370 aa18.35■□□□□ 0.53
UBXN11-214ENST00000475591 SPATA31D1Q6ZQQ2 1576 aa18.35■□□□□ 0.53
UBXN11-214ENST00000475591 NINLQ9Y2I6 1382 aa18.35■□□□□ 0.53
UBXN11-214ENST00000475591 ANP32AP39687 249 aaKnown RBP18.34■□□□□ 0.53
UBXN11-214ENST00000475591 TERF2IPQ9NYB0 399 aa18.34■□□□□ 0.53
UBXN11-214ENST00000475591 ARHGEF40Q8TER5 1519 aa18.34■□□□□ 0.53
UBXN11-214ENST00000475591 PHF23Q9BUL5 403 aaPredicted RBP18.33■□□□□ 0.53
UBXN11-214ENST00000475591 BACH2Q9BYV9 841 aa18.33■□□□□ 0.53
UBXN11-214ENST00000475591 NOP58Q9Y2X3 529 aaKnown RBP18.33■□□□□ 0.53
UBXN11-214ENST00000475591 PPP6R1Q9UPN7 881 aa18.33■□□□□ 0.52
UBXN11-214ENST00000475591 NLRP1Q9C000 1473 aa18.32■□□□□ 0.52
UBXN11-214ENST00000475591 U2SURPO15042 1029 aaKnown RBP18.32■□□□□ 0.52
UBXN11-214ENST00000475591 MS4A1P11836 297 aa18.31■□□□□ 0.52
UBXN11-214ENST00000475591 CENPQQ7L2Z9 268 aaPredicted RBP18.31■□□□□ 0.52
UBXN11-214ENST00000475591 FBLN1P23142 703 aa18.3■□□□□ 0.52
UBXN11-214ENST00000475591 PANK1Q8TE04 598 aa18.3■□□□□ 0.52
UBXN11-214ENST00000475591 IPO9Q96P70 1041 aaKnown RBP18.3■□□□□ 0.52
UBXN11-214ENST00000475591 KIF13AQ9H1H9 1805 aa18.3■□□□□ 0.52
UBXN11-214ENST00000475591 HDGFL2Q7Z4V5 671 aaPredicted RBP18.29■□□□□ 0.52
UBXN11-214ENST00000475591 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.29■□□□□ 0.52
UBXN11-214ENST00000475591 FRAT1Q92837 279 aaPredicted RBP18.29■□□□□ 0.52
UBXN11-214ENST00000475591 BCL2L13Q9BXK5 485 aa18.29■□□□□ 0.52
UBXN11-214ENST00000475591 COL3A1P02461 1466 aaPredicted RBP18.29■□□□□ 0.52
UBXN11-214ENST00000475591 SETD1AO15047 1707 aaKnown RBP18.29■□□□□ 0.52
UBXN11-214ENST00000475591 CANXP27824 592 aaKnown RBP18.28■□□□□ 0.52
UBXN11-214ENST00000475591 WDR63Q8IWG1 891 aa18.28■□□□□ 0.52
UBXN11-214ENST00000475591 TNNQ9UQP3 1299 aa18.28■□□□□ 0.52
UBXN11-214ENST00000475591 COG6Q9Y2V7 657 aa18.28■□□□□ 0.52
UBXN11-214ENST00000475591 ZMYM3Q14202 1370 aa18.27■□□□□ 0.52
UBXN11-214ENST00000475591 RARSP54136 660 aaKnown RBP18.27■□□□□ 0.52
UBXN11-214ENST00000475591 METP08581 1390 aa18.27■□□□□ 0.52
UBXN11-214ENST00000475591 CCDC27Q2M243 656 aa18.27■□□□□ 0.52
UBXN11-214ENST00000475591 PLEKHF1Q96S99 279 aa18.26■□□□□ 0.51
UBXN11-214ENST00000475591 NRXN3Q9Y4C0 1643 aa18.26■□□□□ 0.51
UBXN11-214ENST00000475591 ADGRB2O60241 1585 aa18.26■□□□□ 0.51
UBXN11-214ENST00000475591 ESF1Q9H501 851 aaKnown RBP18.26■□□□□ 0.51
UBXN11-214ENST00000475591 ANKRD26Q9UPS8 1709 aa18.26■□□□□ 0.51
UBXN11-214ENST00000475591 TXNDC2Q86VQ3 553 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms