RNA–Protein interactions for RNA: ENST00000475551.5

CCM2-207, Transcript of CCM2 scaffold protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCM2, Length 2,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-207ENST00000475551 CLCN1P35523 988 aa22.65■■□□□ 1.22
CCM2-207ENST00000475551 RTEL1-TNFRSF6BF6WH68 1400 aa22.64■■□□□ 1.21
CCM2-207ENST00000475551 COG6Q9Y2V7 657 aa22.64■■□□□ 1.21
CCM2-207ENST00000475551 KIDINS220Q9ULH0 1771 aa22.64■■□□□ 1.21
CCM2-207ENST00000475551 HECW2Q9P2P5 1572 aa22.63■■□□□ 1.21
CCM2-207ENST00000475551 GLIPR1L2Q4G1C9 344 aa22.63■■□□□ 1.21
CCM2-207ENST00000475551 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.63■■□□□ 1.21
CCM2-207ENST00000475551 PANK1Q8TE04 598 aa22.62■■□□□ 1.21
CCM2-207ENST00000475551 MLH3Q9UHC1 1453 aa22.62■■□□□ 1.21
CCM2-207ENST00000475551 MCM4P33991 863 aa22.62■■□□□ 1.21
CCM2-207ENST00000475551 DMRT2Q9Y5R5 561 aa22.62■■□□□ 1.21
CCM2-207ENST00000475551 MADDQ8WXG6 1647 aa22.61■■□□□ 1.21
CCM2-207ENST00000475551 MYOM1P52179 1685 aa22.61■■□□□ 1.21
CCM2-207ENST00000475551 CANXP27824 592 aaKnown RBP22.61■■□□□ 1.21
CCM2-207ENST00000475551 SCAF11Q99590 1463 aaKnown RBP22.6■■□□□ 1.21
CCM2-207ENST00000475551 PNNQ9H307 717 aaKnown RBP22.6■■□□□ 1.21
CCM2-207ENST00000475551 YEATS2Q9ULM3 1422 aa22.58■■□□□ 1.21
CCM2-207ENST00000475551 ABCA6Q8N139 1617 aa22.56■■□□□ 1.2
CCM2-207ENST00000475551 WWC1Q8IX03 1113 aa22.56■■□□□ 1.2
CCM2-207ENST00000475551 STAC3Q96MF2 364 aa22.55■■□□□ 1.2
CCM2-207ENST00000475551 NAP1L5Q96NT1 182 aaPredicted RBP22.55■■□□□ 1.2
CCM2-207ENST00000475551 PDZRN3Q9UPQ7 1066 aa22.55■■□□□ 1.2
CCM2-207ENST00000475551 MRE11P49959 708 aa22.54■■□□□ 1.2
CCM2-207ENST00000475551 CHMP5Q9NZZ3 219 aa22.54■■□□□ 1.2
CCM2-207ENST00000475551 PCDHB15Q9Y5E8 787 aa22.54■■□□□ 1.2
CCM2-207ENST00000475551 PANK2Q9BZ23 570 aa22.54■■□□□ 1.2
CCM2-207ENST00000475551 DUOX2Q9NRD8 1548 aa22.53■■□□□ 1.2
CCM2-207ENST00000475551 DIP2CQ9Y2E4 1556 aa22.53■■□□□ 1.2
CCM2-207ENST00000475551 RARSP54136 660 aaKnown RBP22.52■■□□□ 1.2
CCM2-207ENST00000475551 RRP9O43818 475 aaKnown RBP22.52■■□□□ 1.2
CCM2-207ENST00000475551 TRAK2O60296 914 aa22.52■■□□□ 1.2
CCM2-207ENST00000475551 KDM5AP29375 1690 aaKnown RBP22.51■■□□□ 1.19
CCM2-207ENST00000475551 RWDD1Q9H446 243 aaPredicted RBP22.51■■□□□ 1.19
CCM2-207ENST00000475551 ISY1Q9ULR0 285 aaKnown RBP22.51■■□□□ 1.19
CCM2-207ENST00000475551 POLR3AO14802 1390 aaPredicted RBP22.51■■□□□ 1.19
CCM2-207ENST00000475551 SPHKAPQ2M3C7 1700 aa22.5■■□□□ 1.19
CCM2-207ENST00000475551 HSP90AA1P07900 732 aaKnown RBP22.5■■□□□ 1.19
CCM2-207ENST00000475551 ARXQ96QS3 562 aa22.5■■□□□ 1.19
CCM2-207ENST00000475551 GZF1Q9H116 711 aaPredicted RBP22.49■■□□□ 1.19
CCM2-207ENST00000475551 PKNOX2Q96KN3 472 aa22.49■■□□□ 1.19
CCM2-207ENST00000475551 SLC24A1O60721 1099 aa22.48■■□□□ 1.19
CCM2-207ENST00000475551 HSP90AA2PQ14568 343 aaPredicted RBP22.48■■□□□ 1.19
CCM2-207ENST00000475551 RLBP1P12271 317 aa22.47■■□□□ 1.19
CCM2-207ENST00000475551 C22orf23Q9BZE7 217 aa22.46■■□□□ 1.19
CCM2-207ENST00000475551 ARHGEF40Q8TER5 1519 aa22.46■■□□□ 1.19
CCM2-207ENST00000475551 DDX11L8A8MPP1 907 aa22.46■■□□□ 1.19
CCM2-207ENST00000475551 CEP152O94986 1710 aa22.45■■□□□ 1.19
CCM2-207ENST00000475551 SPRYD3Q8NCJ5 442 aa22.45■■□□□ 1.18
CCM2-207ENST00000475551 PHF23Q9BUL5 403 aaPredicted RBP22.45■■□□□ 1.18
CCM2-207ENST00000475551 GRPEL1Q9HAV7 217 aa22.45■■□□□ 1.18
CCM2-207ENST00000475551 MYH16Q9H6N6 1097 aa22.44■■□□□ 1.18
CCM2-207ENST00000475551 KIF3BO15066 747 aa22.43■■□□□ 1.18
CCM2-207ENST00000475551 WDR63Q8IWG1 891 aa22.43■■□□□ 1.18
CCM2-207ENST00000475551 TRPM2O94759 1503 aa22.43■■□□□ 1.18
CCM2-207ENST00000475551 CARD14Q9BXL6 1004 aa22.42■■□□□ 1.18
CCM2-207ENST00000475551 KIAA1210Q9ULL0 1709 aa22.42■■□□□ 1.18
CCM2-207ENST00000475551 ESPNB1AK53 854 aa22.41■■□□□ 1.18
CCM2-207ENST00000475551 RUNDC1Q96C34 613 aa22.41■■□□□ 1.18
CCM2-207ENST00000475551 ZNF692Q9BU19 519 aaPredicted RBP22.41■■□□□ 1.18
CCM2-207ENST00000475551 TNNQ9UQP3 1299 aa22.41■■□□□ 1.18
CCM2-207ENST00000475551 IQSEC2Q5JU85 1478 aa22.41■■□□□ 1.18
CCM2-207ENST00000475551 KANK1Q14678 1352 aa22.41■■□□□ 1.18
CCM2-207ENST00000475551 ERVK-7P63135 1459 aa22.4■■□□□ 1.18
CCM2-207ENST00000475551 NCOA3Q9Y6Q9 1424 aa22.4■■□□□ 1.18
CCM2-207ENST00000475551 SIGLEC1Q9BZZ2 1709 aa22.39■■□□□ 1.18
CCM2-207ENST00000475551 SHPRHQ149N8 1683 aa22.39■■□□□ 1.17
CCM2-207ENST00000475551 MVPQ14764 893 aaKnown RBP22.38■■□□□ 1.17
CCM2-207ENST00000475551 HSCBQ8IWL3 235 aa22.38■■□□□ 1.17
CCM2-207ENST00000475551 DDIT3P35638 169 aa22.38■■□□□ 1.17
CCM2-207ENST00000475551 CCDC27Q2M243 656 aa22.38■■□□□ 1.17
CCM2-207ENST00000475551 PTPRTO14522 1441 aa22.38■■□□□ 1.17
CCM2-207ENST00000475551 MFAP1P55081 439 aaKnown RBP22.37■■□□□ 1.17
CCM2-207ENST00000475551 VSIG10Q8N0Z9 540 aa22.37■■□□□ 1.17
CCM2-207ENST00000475551 TCP11L2Q8N4U5 519 aa22.36■■□□□ 1.17
CCM2-207ENST00000475551 REREQ9P2R6 1566 aa22.36■■□□□ 1.17
CCM2-207ENST00000475551 NCBP3Q53F19 620 aaKnown RBP22.35■■□□□ 1.17
CCM2-207ENST00000475551 GGT6Q6P531 493 aa22.35■■□□□ 1.17
CCM2-207ENST00000475551 ZMYND15Q9H091 742 aa22.35■■□□□ 1.17
CCM2-207ENST00000475551 NEUROD2Q15784 382 aa22.34■■□□□ 1.17
CCM2-207ENST00000475551 ERBB4Q15303 1308 aa22.34■■□□□ 1.17
CCM2-207ENST00000475551 BCL2L13Q9BXK5 485 aa22.34■■□□□ 1.17
CCM2-207ENST00000475551 CLTCL1P53675 1640 aa22.34■■□□□ 1.17
CCM2-207ENST00000475551 SNX21Q969T3 373 aa22.33■■□□□ 1.17
CCM2-207ENST00000475551 RRP7AQ9Y3A4 280 aaKnown RBP22.33■■□□□ 1.17
CCM2-207ENST00000475551 DEPDC5O75140 1603 aa22.33■■□□□ 1.16
CCM2-207ENST00000475551 HDAC1Q13547 482 aaPredicted RBP22.33■■□□□ 1.16
CCM2-207ENST00000475551 MROH1Q8NDA8 1641 aa22.32■■□□□ 1.16
CCM2-207ENST00000475551 CIZ1Q9ULV3 898 aaPredicted RBP22.32■■□□□ 1.16
CCM2-207ENST00000475551 ZKSCAN2Q63HK3 967 aa22.32■■□□□ 1.16
CCM2-207ENST00000475551 TRIM44Q96DX7 344 aaPredicted RBP22.32■■□□□ 1.16
CCM2-207ENST00000475551 NEURL4Q96JN8 1562 aa22.31■■□□□ 1.16
CCM2-207ENST00000475551 DZIP1LQ8IYY4 767 aaKnown RBP22.31■■□□□ 1.16
CCM2-207ENST00000475551 TPM2P07951 284 aa22.3■■□□□ 1.16
CCM2-207ENST00000475551 PTMSP20962 102 aa22.3■■□□□ 1.16
CCM2-207ENST00000475551 RBM25P49756 843 aaKnown RBP22.3■■□□□ 1.16
CCM2-207ENST00000475551 MLECQ14165 292 aa22.3■■□□□ 1.16
CCM2-207ENST00000475551 SMC5Q8IY18 1101 aa22.3■■□□□ 1.16
CCM2-207ENST00000475551 AGLP35573 1532 aa22.3■■□□□ 1.16
CCM2-207ENST00000475551 SKOR2Q2VWA4 1001 aaPredicted RBP22.3■■□□□ 1.16
CCM2-207ENST00000475551 CT47B1P0C2W7 299 aaPredicted RBP22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms