RNA–Protein interactions for RNA: ENST00000475524.1

MCF2L-224, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-224ENST00000475524 CDC42BPGQ6DT37 1551 aa21.31■■□□□ 1
MCF2L-224ENST00000475524 ST20-MTHFSA0A0A6YYL1 179 aa21.3■■□□□ 1
MCF2L-224ENST00000475524 PLEKHH1Q9ULM0 1364 aa21.29■■□□□ 1
MCF2L-224ENST00000475524 PROSER2Q86WR7 435 aaPredicted RBP21.29■■□□□ 1
MCF2L-224ENST00000475524 DCCP43146 1447 aa21.29■■□□□ 1
MCF2L-224ENST00000475524 TESK2Q96S53 571 aa21.28■■□□□ 1
MCF2L-224ENST00000475524 IQSEC2Q5JU85 1478 aa21.27■■□□□ 1
MCF2L-224ENST00000475524 WAPLQ7Z5K2 1190 aa21.27■■□□□ 1
MCF2L-224ENST00000475524 TMEM94Q12767 1356 aa21.26■□□□□ 0.99
MCF2L-224ENST00000475524 TULP4Q9NRJ4 1543 aa21.24■□□□□ 0.99
MCF2L-224ENST00000475524 PUS7Q96PZ0 661 aaKnown RBP21.24■□□□□ 0.99
MCF2L-224ENST00000475524 FMN2Q9NZ56 1722 aa21.24■□□□□ 0.99
MCF2L-224ENST00000475524 TMF1P82094 1093 aa21.22■□□□□ 0.99
MCF2L-224ENST00000475524 EVC2Q86UK5 1308 aa21.22■□□□□ 0.99
MCF2L-224ENST00000475524 CDCA8Q53HL2 280 aa21.21■□□□□ 0.99
MCF2L-224ENST00000475524 C19orf44Q9H6X5 657 aa21.21■□□□□ 0.99
MCF2L-224ENST00000475524 MSH6P52701 1360 aa21.21■□□□□ 0.99
MCF2L-224ENST00000475524 MINK1Q8N4C8 1332 aaPredicted RBP21.2■□□□□ 0.98
MCF2L-224ENST00000475524 ITSN1Q15811 1721 aa21.19■□□□□ 0.98
MCF2L-224ENST00000475524 SAFB2Q14151 953 aaKnown RBP eCLIP21.19■□□□□ 0.98
MCF2L-224ENST00000475524 ANKARQ7Z5J8 1434 aa21.19■□□□□ 0.98
MCF2L-224ENST00000475524 WASLO00401 505 aaPredicted RBP21.18■□□□□ 0.98
MCF2L-224ENST00000475524 TOPAZ1Q8N9V7 1692 aa21.16■□□□□ 0.98
MCF2L-224ENST00000475524 ATAD2Q6PL18 1390 aa21.16■□□□□ 0.98
MCF2L-224ENST00000475524 DISP3Q9P2K9 1392 aa21.16■□□□□ 0.98
MCF2L-224ENST00000475524 C14orf37Q86TY3 774 aa21.16■□□□□ 0.98
MCF2L-224ENST00000475524 CADPS2Q86UW7 1296 aa21.15■□□□□ 0.98
MCF2L-224ENST00000475524 USP32Q8NFA0 1604 aa21.15■□□□□ 0.98
MCF2L-224ENST00000475524 HIRIP3Q9BW71 556 aaPredicted RBP21.14■□□□□ 0.97
MCF2L-224ENST00000475524 ATP7BP35670 1465 aa21.13■□□□□ 0.97
MCF2L-224ENST00000475524 NINLQ9Y2I6 1382 aa21.13■□□□□ 0.97
MCF2L-224ENST00000475524 CDK19Q9BWU1 502 aa21.13■□□□□ 0.97
MCF2L-224ENST00000475524 ATF3P18847 181 aa21.12■□□□□ 0.97
MCF2L-224ENST00000475524 RBM33Q96EV2 1170 aaKnown RBP21.11■□□□□ 0.97
MCF2L-224ENST00000475524 MST1RQ04912 1400 aa21.11■□□□□ 0.97
MCF2L-224ENST00000475524 MYOM1P52179 1685 aa21.1■□□□□ 0.97
MCF2L-224ENST00000475524 SRPK2P78362 688 aaKnown RBP21.1■□□□□ 0.97
MCF2L-224ENST00000475524 CCDC7Q96M83 1385 aa21.1■□□□□ 0.97
MCF2L-224ENST00000475524 KIF1AQ12756 1690 aa21.09■□□□□ 0.97
MCF2L-224ENST00000475524 ZNF316A6NFI3 1004 aaPredicted RBP21.09■□□□□ 0.97
MCF2L-224ENST00000475524 RGPD8O14715 1765 aaPredicted RBP21.09■□□□□ 0.97
MCF2L-224ENST00000475524 KIF7Q2M1P5 1343 aa21.08■□□□□ 0.97
MCF2L-224ENST00000475524 C1orf167Q5SNV9 1468 aa21.07■□□□□ 0.96
MCF2L-224ENST00000475524 CERKQ8TCT0 537 aa21.07■□□□□ 0.96
MCF2L-224ENST00000475524 C11orf95C9JLR9 678 aaPredicted RBP21.06■□□□□ 0.96
MCF2L-224ENST00000475524 NUDT16Q96DE0 195 aaKnown RBP21.06■□□□□ 0.96
MCF2L-224ENST00000475524 CCDC61Q9Y6R9 512 aa21.06■□□□□ 0.96
MCF2L-224ENST00000475524 WASHC2AQ641Q2 1341 aa21.05■□□□□ 0.96
MCF2L-224ENST00000475524 PRR36Q9H6K5 1346 aa21.05■□□□□ 0.96
MCF2L-224ENST00000475524 CABP2Q9NPB3 220 aa21.05■□□□□ 0.96
MCF2L-224ENST00000475524 AKAP12Q02952 1782 aa21.03■□□□□ 0.96
MCF2L-224ENST00000475524 PPIP5K1Q6PFW1 1433 aa21.03■□□□□ 0.96
MCF2L-224ENST00000475524 PLEKHG3A1L390 1219 aa21.02■□□□□ 0.96
MCF2L-224ENST00000475524 POLR3AO14802 1390 aaPredicted RBP21■□□□□ 0.95
MCF2L-224ENST00000475524 TOM1O60784 492 aa21■□□□□ 0.95
MCF2L-224ENST00000475524 SLAIN2Q9P270 581 aa21■□□□□ 0.95
MCF2L-224ENST00000475524 MON2Q7Z3U7 1717 aa20.99■□□□□ 0.95
MCF2L-224ENST00000475524 BRD4O60885 1362 aaPredicted RBP20.97■□□□□ 0.95
MCF2L-224ENST00000475524 ANKRD36BQ8N2N9 1353 aa20.97■□□□□ 0.95
MCF2L-224ENST00000475524 NHSL1Q5SYE7 1610 aa20.97■□□□□ 0.95
MCF2L-224ENST00000475524 CPSF1Q10570 1443 aaKnown RBP20.97■□□□□ 0.95
MCF2L-224ENST00000475524 CD163L1Q9NR16 1453 aa20.96■□□□□ 0.95
MCF2L-224ENST00000475524 TERF2IPQ9NYB0 399 aa20.96■□□□□ 0.95
MCF2L-224ENST00000475524 PHF8Q9UPP1 1060 aa20.96■□□□□ 0.95
MCF2L-224ENST00000475524 ROBO1Q9Y6N7 1651 aa20.96■□□□□ 0.95
MCF2L-224ENST00000475524 NUTM2FA1L443 756 aa20.95■□□□□ 0.94
MCF2L-224ENST00000475524 CABP1Q9NZU7 370 aa20.95■□□□□ 0.94
MCF2L-224ENST00000475524 NRKQ7Z2Y5 1582 aa20.94■□□□□ 0.94
MCF2L-224ENST00000475524 ESCO1Q5FWF5 840 aa20.94■□□□□ 0.94
MCF2L-224ENST00000475524 ZNF692Q9BU19 519 aaPredicted RBP20.94■□□□□ 0.94
MCF2L-224ENST00000475524 AHDC1Q5TGY3 1603 aaPredicted RBP20.93■□□□□ 0.94
MCF2L-224ENST00000475524 TMC1Q8TDI8 760 aa20.93■□□□□ 0.94
MCF2L-224ENST00000475524 POLR3GLQ9BT43 218 aa20.93■□□□□ 0.94
MCF2L-224ENST00000475524 SLC12A5Q9H2X9 1139 aa20.93■□□□□ 0.94
MCF2L-224ENST00000475524 BRINP3Q76B58 766 aa20.92■□□□□ 0.94
MCF2L-224ENST00000475524 HDGFL2Q7Z4V5 671 aaPredicted RBP20.92■□□□□ 0.94
MCF2L-224ENST00000475524 A0A1W2PP64 1363 aa20.92■□□□□ 0.94
MCF2L-224ENST00000475524 ACEP12821 1306 aa20.91■□□□□ 0.94
MCF2L-224ENST00000475524 NPHP3Q7Z494 1330 aa20.91■□□□□ 0.94
MCF2L-224ENST00000475524 ORAI2Q96SN7 254 aa20.91■□□□□ 0.94
MCF2L-224ENST00000475524 USP6P35125 1406 aa20.9■□□□□ 0.94
MCF2L-224ENST00000475524 EDC4Q6P2E9 1401 aaKnown RBP20.9■□□□□ 0.94
MCF2L-224ENST00000475524 UBAP1LF5GYI3 381 aa20.9■□□□□ 0.94
MCF2L-224ENST00000475524 TRPM3Q9HCF6 1732 aaPredicted RBP20.9■□□□□ 0.94
MCF2L-224ENST00000475524 NGDNQ8NEJ9 315 aaKnown RBP20.89■□□□□ 0.93
MCF2L-224ENST00000475524 KTN1Q86UP2 1357 aaKnown RBP20.88■□□□□ 0.93
MCF2L-224ENST00000475524 PXDNQ92626 1479 aa20.88■□□□□ 0.93
MCF2L-224ENST00000475524 SSH2Q76I76 1423 aa20.87■□□□□ 0.93
MCF2L-224ENST00000475524 PMFBP1Q8TBY8 1022 aa20.87■□□□□ 0.93
MCF2L-224ENST00000475524 PANK3Q9H999 370 aa20.86■□□□□ 0.93
MCF2L-224ENST00000475524 USP54Q70EL1 1684 aa20.86■□□□□ 0.93
MCF2L-224ENST00000475524 KIF20BQ96Q89 1820 aa20.85■□□□□ 0.93
MCF2L-224ENST00000475524 SBNO1A3KN83 1393 aa20.85■□□□□ 0.93
MCF2L-224ENST00000475524 TTC21AQ8NDW8 1320 aa20.84■□□□□ 0.93
MCF2L-224ENST00000475524 FOXO3O43524 673 aa20.84■□□□□ 0.93
MCF2L-224ENST00000475524 PSME1Q06323 249 aa20.84■□□□□ 0.93
MCF2L-224ENST00000475524 NPC1L1Q9UHC9 1359 aa20.84■□□□□ 0.93
MCF2L-224ENST00000475524 ALS2Q96Q42 1657 aa20.83■□□□□ 0.93
MCF2L-224ENST00000475524 SOS2Q07890 1332 aaPredicted RBP20.83■□□□□ 0.93
MCF2L-224ENST00000475524 NSD3Q9BZ95 1437 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 228.3 ms